Oryzias melastigma (Indian medaka): 112153232
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Entry
112153232 CDS
T07439
Symbol
faf2
Name
(RefSeq) FAS-associated factor 2 isoform X1
KO
K18726
FAS-associated factor 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112153232 (faf2)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112153232 (faf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_8
FAF1
UBA_4
UBX
Thioredoxin_7
TAP_C
PFF1_TM
FRG1
Motif
Other DBs
NCBI-GeneID:
112153232
NCBI-ProteinID:
XP_024139035
Ensembl:
ENSOMEG00000011110
LinkDB
All DBs
Position
LG10:complement(19269845..19276304)
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AA seq
445 aa
AA seq
DB search
MAAPEEPELSQAQTEKLLQFQDLTGLESMDQCRRTLEQHNWNIEAAVQDRLNEQEGVPSV
FNPPPSRPLQVNTADHRVYSYIVSRPQPRGLLGWSYYLIMLPFRFTYYTLLDIFRFALRF
IRPDPRGRVTDPVGDVVSFIQSFEEKYGRSHPVFYQGTYSQALNDAKRELRYLLVYLHGD
DHQDTDEFCRSTLCTEEVITFLNTQMLFWACSTSKPEGYRVSQALRENTYPFLAMIMLKD
RRMTVVGRLEGLIQPEDFINQLTFIMDANQTYLMSERLEREERNQTQVLRQQQDEAYLVS
LRADQEKERKKREELEQRRQEEEKVRQSALAEERRRRNLEEEKERKSECLPLEPPADDPE
SVKIVFKLPNDTRVERRFLFGQSLTVIHDFLFSLKETPEKFQIVTNFPRRVLPCLPTEEQ
PNPPTLKEAGLSRSEVLFVQDLTDD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccagaggagccagaattatcccaggcgcagaccgaaaaactccttcaattt
caggatttaacgggtttggaatcaatggaccaatgtcgtcgaacattagagcagcataat
tggaacatagaggctgcagtgcaagacagactcaatgagcaagaaggagttcctagtgtg
ttcaatcctcctccatccagaccacttcaggttaatacagcagaccatagagtttatagt
tacatcgtttcacggcctcaacccaggggattactaggatggagttactacttgataatg
ctacccttcagatttacatattacacactcctggacatattcaggtttgccctacggttc
attaggccagatcctcgtggtcgcgtcacagaccctgttggagatgtcgtttcttttatt
caaagttttgaagagaagtatggccggtcacatcctgtgttttaccaggggacatacagc
caggcactgaatgatgccaaacgggaacttcgctacctgttggtgtatcttcatggagat
gaccatcaagacacagacgagttctgccgttcgacgttatgtacagaagaagtcataacc
ttcctcaacacacaaatgctgttttgggcatgttcaaccagcaagcctgaaggctacaga
gtgtcccaagctctgcgggagaacacctatccattcctggccatgatcatgctcaaggac
cgccggatgactgtggtgggccgactggagggtctcatccagccagaagacttcatcaat
cagctcaccttcatcatggatgccaaccagacatatctgatgtcagagcgccttgaacgt
gaagagagaaaccagacccaagttctgaggcagcagcaggacgaagcctatctcgtctcc
ctgcgtgccgaccaggaaaaggagagaaagaaaagggaggagctggagcaacgaaggcaa
gaggaggagaaggtccggcagagtgctcttgctgaggagcggagacgaaggaatctggaa
gaagagaaggagaggaagtcggaatgtcttccattggagcctcctgcagatgatccagaa
agtgtcaaaatagtgttcaagctgcccaacgacacgcgggtggaaaggcgattcctgttt
ggccaatctctgacggtaatacacgacttccttttctctttgaaagaaacgccagagaag
tttcagatagtcacaaacttccctcgccgagtcttgccctgccttcccactgaggaacaa
cccaacccccccacactaaaagaggctgggctcagccgctcggaggtcctttttgttcaa
gacctcacggacgattga
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