Oryzias melastigma (Indian medaka): 112153238
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Entry
112153238 CDS
T07439
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00061
Fatty acid biosynthesis
oml00071
Fatty acid degradation
oml01100
Metabolic pathways
oml01212
Fatty acid metabolism
oml03320
PPAR signaling pathway
oml04146
Peroxisome
oml04216
Ferroptosis
oml04920
Adipocytokine signaling pathway
Module
oml_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112153238
00071 Fatty acid degradation
112153238
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112153238
09143 Cell growth and death
04216 Ferroptosis
112153238
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112153238
03320 PPAR signaling pathway
112153238
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
oml01004
]
112153238
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112153238
Enzymes [BR:
oml01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112153238
Lipid biosynthesis proteins [BR:
oml01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112153238
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of breast milk
112153238
Exosomal proteins of breast cancer cells
112153238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112153238
NCBI-ProteinID:
XP_024139047
Ensembl:
ENSOMEG00000019529
LinkDB
All DBs
Position
LG10:24395243..24410659
Genome browser
AA seq
733 aa
AA seq
DB search
MISWESTITPGYCLVQGSRKTKGRQQIPIYSSISIMVGQDFLRRLNVPDLEEISHCIKNA
SAPLLVSVGAIAAATTYYLATRPKALAPLCDLHRQSVEVEGEGLARRSVFADDGSFLTHI
YEDAKTMYESFLRGIKVSQNGPCLGSRKPKQPYEWISYGEVKQRSENLGSAFLHKGHSKS
VDPHIGIFSQNRPEWTMTELACHTYSLVSVPLYDTLGTEAISYVINKASISTVVCDVKDK
VNLILDCFKDSKHSLKTIVLMEEPNESLVERAREAGIQILSLAAMEALGKANHQQPIPPQ
PEDMAVICFTSGTTGNPKGAMLTHGNIMSNCSSFVKLTEFCCPIDHTDVHISYLPLAHMF
ERVVQGSMLLHGARIGFFQGDIRWLFDDLHTLKPTFFPGVPRLLNRIYDKVYGQANSSLK
RWLLQFAYNRKEAELRRGIVRKDSIWDQLIFKKVQASLGGRVRLMLTGAAPISPAVLTFL
RVAMGCQFYEGYGQTECTAGCTITLPGDFSEGHVGPPLPCNIIKLMDVPEMNYYAVNGEG
EVCVKGSNVFKGYLRDPEKTAETIDADGWVHTGDIGKWLPNGTLKIVDRKKHIFKLAQGE
YIAPEKIENIYTRSDAVAQVFVHGDSLQAFLVAVVVPDPEFLSGWAERKLNLQGSYKELC
GKEKVKAAILEDMLRLGKEGGLKSFEQVKAIYVHTELFSIENGLLTPTLKSKRNEMRQYF
RSQIDELYQDIKM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgatcagctgggagtcgactatcacaccaggttattgtctggtgcagggcagcaggaag
actaaaggacgacagcagatccccatttacagcagcatcagcatcatggtcggtcaggat
tttttacggaggctgaacgtccccgatctggaggaaatcagccattgcatcaagaatgcc
tccgcccccttgctggtcagcgtgggcgccatagctgccgcaacaacctactacctggca
acccggcccaaggccctggcgccactgtgtgaccttcacaggcagtcagttgaagtggag
ggggaaggtttggcgcggcgctctgtttttgcagacgacggtagtttcctgactcacatt
tatgaagacgccaaaacgatgtacgagtccttcctcagagggattaaagtctcccaaaac
ggtccatgtttgggctccaggaaaccgaagcagccgtacgagtggatttcctacggggag
gtcaaacaaagaagcgagaacctgggctcagcttttctccataaaggacattcaaagagt
gtggatcctcacatcggtatcttctcccagaacaggcctgagtggaccatgactgagttg
gcgtgtcacacatactcactggtgtcggttcctctgtacgacacgctgggaacggaggcc
atctcttacgtcataaacaaagcatccatctccaccgtggtgtgtgacgtgaaggataaa
gtcaacctcatccttgactgtttcaaggactcaaagcattcgttaaaaaccatagtttta
atggaggagccgaatgaaagcctggtggagagggcgcgggaagctggaatccagatcctg
agcctggcggcgatggaggctttagggaaggccaaccatcagcagccaattcccccacaa
cccgaagacatggcagtgatttgcttcaccagcgggacaacaggaaaccctaaaggagcc
atgctgactcatgggaatatcatgtcgaactgctcgtcttttgttaaactgacagagttc
tgctgtcccatagatcacacagacgtccacatttcctacctgcctctggctcatatgttt
gagagagtagtccagggatccatgctgttgcacggagcccgaatcggcttcttccagggg
gacattcggtggctgtttgacgatctgcacaccttgaaacccacttttttcccaggcgtt
cctcgactcctcaacagaatttacgacaaggtctacgggcaggcaaactcctcgttgaag
cgctggctgctgcagttcgcctacaataggaaggaggcggaactgaggagaggtatcgtg
aggaaagacagcatctgggatcagctcatcttcaagaaggtccaggccagcctcgggggc
cgtgtgcgtctcatgctgactggagctgctcccatctcccccgccgtcctcaccttcctc
agagttgcaatgggctgtcagttctatgaaggatacggacagacagaatgcacagctgga
tgcaccattaccctacctggagacttcagtgaaggtcatgttggacctcctttaccctgt
aacatcattaaactgatggatgtgccggagatgaactactacgctgtaaatggagaagga
gaggtgtgcgtcaaaggttcaaacgtgtttaaaggctacctgagagacccggaaaagacg
gcagagactattgacgcagacggatgggttcacactggagatattggcaaatggcttcca
aacggcacgctgaagatcgtggacaggaaaaagcacatcttcaagctggctcagggggag
tacatcgcgcctgagaagatagagaacatctacaccaggagtgacgcggtggcgcaggtc
tttgttcatggagacagccttcaggcatttttggtagctgtggtggtgcctgatccggag
tttctgtccggctgggcagagagaaagctgaacctgcagggcagttataaagagctgtgt
ggcaaagagaaagtaaaggcggccattttggaggacatgcttcggttggggaaagaagga
ggtttgaagtcctttgagcaggttaaagccatctatgttcacaccgagctcttctccatt
gagaacggcctgctcactccaacgctgaagagcaagaggaacgaaatgcgtcaatacttc
cgatctcagatagatgagctttaccaagatatcaaaatgtag
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