Oryzias melastigma (Indian medaka): 112153243
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Entry
112153243 CDS
T07439
Symbol
atl3
Name
(RefSeq) atlastin-3
KO
K17339
atlastin [EC:3.6.5.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112153243 (atl3)
Membrane trafficking [BR:
oml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112153243 (atl3)
Autophagy
ER-phagy
ER-phagy recepters
112153243 (atl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
DUF2207_C
Oleosin
Motif
Other DBs
NCBI-GeneID:
112153243
NCBI-ProteinID:
XP_024139062
Ensembl:
ENSOMEG00000017826
LinkDB
All DBs
Position
LG10:11129950..11140851
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AA seq
511 aa
AA seq
DB search
MGIEPGPVQIISVSKDDHSFELNTEALAQILLAPEVRNKHVVVLSVAGAFRKGKSFLLDF
MIRYMHRKEDKNWLGRDDEPLTGFSWRGGSEPETTGIQLWSEVFVVQKSDGSEVAVVLMD
TQGAFDDQSTVRDCATIFALSTMTSSVQIYNLSQNVQEDDLQQLQLFTEYGRLALDEIFL
KPFQSLMFLVRDWSFPYEYEYGFKGGNDFLDKRLQVKEAQHEELQTVREHIHSCFTNISC
FLLPHPGLKVATSPGFKGQLCDVSPEFKEQLQSLIPKLLHPDRLTEKEINGNKVTCRGLL
EFFKAYIKIYQGEDLPQPKTMLMATAEANNLAAVAAAKDQYQKNMEKVCGGDLPYVAPES
LQEKHIFFSGEALHTFSSTKKMGGQEFCDRYRAQLEKELEEMWQSLSKHNESKNLFSAFR
TPAVLFVLVCLLYVLSGVLLFVGLSTFAMVCDCSLGLIMIAMLTWAFIRYSGQYRTVGGA
IDQAAGVVLEQATVMLNKSRGANATTLKKSN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcgaacccggtccagtccaaatcatcagtgtatccaaggatgatcactccttt
gagttgaacacagaagctctggcccagattctgctggctccagaggtcaggaacaaacat
gtggtggttctgtcagtggctggagctttcaggaagggcaaaagcttcctacttgatttc
atgattcgctacatgcacagaaaggaggacaagaactggctgggtcgggatgatgagcct
ctgactggtttttcatggagagggggttcagaaccagaaacgacaggcattcagctctgg
agtgaagtctttgtggtccaaaagagtgatggatcagaggtggctgttgtcctgatggat
actcagggagcattcgatgaccagtctaccgtgagggactgtgccaccatctttgccctc
agcaccatgaccagctccgtacagatctacaatctctcacagaatgttcaggaggacgac
ttgcagcagctgcagcttttcacagagtatggacgtctcgccttggacgagatatttctg
aaacccttccagtccttgatgtttctggtgagagactggagttttccctacgaatacgag
tacggcttcaagggtggaaatgatttcctggataagcgactacaggtgaaggaggcccaa
cacgaggagctgcagacagtcagggagcacatccactcctgcttcaccaacatctcctgc
tttttgctgcctcatccggggttgaaggttgccaccagtcctggttttaagggacaactt
tgtgatgtgtccccagaatttaaagagcagctgcagagtctgattcctaaactgctgcat
ccagaccggctgactgagaaagagattaacggaaacaaagtcacgtgtcgaggcctgctc
gagttcttcaaggcgtacataaagatctatcagggagaagaccttccccagccaaaaact
atgcttatggctacagcagaggccaacaacctggcagcagtggcagctgctaaagatcag
tatcagaagaacatggagaaggtgtgtgggggcgacctcccttacgtggctcctgagtcg
ctccaggagaaacatatcttcttctctggagaggctcttcacaccttttcatccacgaaa
aagatgggcgggcaggagttttgcgaccgttaccgagcgcagctggaaaaagagctggaa
gaaatgtggcagtctttgagcaagcacaatgagtctaaaaacctcttcagcgccttccgg
actcccgccgtgctcttcgtcctggtctgcctcctctacgtgctgtcaggcgtcttgctc
tttgtcggcctgtccactttcgccatggtgtgtgactgcagtctgggcttgatcatgatc
gccatgctgacgtgggccttcatccgctattccggccagtaccggactgtgggcggagcc
atcgaccaagctgcaggtgttgttctggagcaggccactgtgatgttgaacaagtcgaga
ggagcaaacgcaacaaccctgaagaaatccaactag
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