Oryzias melastigma (Indian medaka): 112153247
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Entry
112153247 CDS
T07439
Symbol
rnf44
Name
(RefSeq) RING finger protein 44 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112153247 (rnf44)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112153247 (rnf44)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112153247 (rnf44)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
MJ0401
VPS18_RING_C
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
112153247
NCBI-ProteinID:
XP_024139068
Ensembl:
ENSOMEG00000011064
LinkDB
All DBs
Position
LG10:19258027..19266292
Genome browser
AA seq
440 aa
AA seq
DB search
MRPWEIAVNRLPPTAPLNPRRFLGEPCNAPVHLRRSPPVRRQWGRRDRPVLHASPVQDEN
FHHLLFSQHHQQVPLDESRQYSHTSTAPRMLHPAAHLPQQSPIMVDLHDQMHQGSVPISY
TVTTVTTHGFPIHTGQPLPGCNTQQLPACSVMFSGQLSLLCCLPPPLIQACTMQHIPVSY
QAFPPLLSSEHFVLHPTPSAPPHQPPHLTPLSQFVPLQPQHPRMPLQRVENEVDLRGDQH
SVGTFSYPPSHHPPALPPSLPLQYLPQEPLHQELPFGVPYPHVLPRRVNGQRYRLQQPLP
APPPPPSYYPGFLPYFLSMLPVPPTAVGPAISLDLDVDDVEMENYEALLNLAERLGEAKP
RGLTKADIEQLPSYRFNSENHLSEQTLCVVCFSDFECRQLLRVLPCNHEFHAKCVDKWLK
TNRTCPICRADASDVHREVE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatgggaaatagcagtaaataggctgccaccaacagcccccttgaacccgagg
agattccttggagaaccttgcaacgcccccgtgcacctcaggagaagcccaccagtgaga
cgccagtgggggagaagagacaggcctgtgctgcacgcttccccggtccaggatgagaac
ttccatcatctgcttttctcacagcatcaccaacaggttcctttagatgagtcccgccag
tacagccacaccagcacagcaccacgcatgcttcaccctgctgctcacctgccacagcag
agccccatcatggttgatttacatgaccagatgcaccagggatctgttccaatatcatat
actgttacaacggtgacaacccatgggtttcccatccacaccgggcagccccttccaggg
tgcaacactcagcagctcccagcatgctcggtaatgttcagcggacagctctctctgctc
tgctgccttcctcctcctcttatacaggcatgtaccatgcagcatatacctgtgtcttat
caagcctttccgcccctgctctccagcgaacattttgtattacacccaaccccatctgca
cctcctcaccagccaccgcaccttactcctttgagccagtttgtccctttacagccacag
cacccgcgcatgcctctgcagagggttgagaatgaagttgacctaagaggggaccagcac
tccgtcggcacattctcatatcctccctctcaccatccaccagcgctgcctccttcactg
cccctacagtatcttcctcaagagcctctacatcaggagcttccctttggagtgccatat
cctcatgtgctgccacggcgagtaaatggacagagatatcgactgcagcaacctctcccc
gctcctcctccccctccgtcttactacccaggcttcctcccttacttcctgtcaatgctt
cccgtgcctccaacggctgtgggcccggccatcagcctcgacctggatgtggatgacgtg
gagatggagaactatgaagcgttgttgaatttggctgaacggttgggtgaagcgaaacct
cgaggtctcacaaaagcagatatagagcaacttccgtcctacagattcaactcagaaaat
cacctttctgaacaaacgctgtgtgttgtgtgctttagtgactttgagtgtaggcagcta
cttcgggtattaccttgtaaccacgaattccacgccaagtgtgtggataaatggttaaag
accaatcgcacttgtcctatctgccgagccgatgcgtcggacgtacaccgggaggtggag
tga
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