Oryzias melastigma (Indian medaka): 112153252
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Entry
112153252 CDS
T07439
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112153252 (aff2)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112153252 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
112153252
NCBI-ProteinID:
XP_024139079
Ensembl:
ENSOMEG00000017218
LinkDB
All DBs
Position
LG10:complement(23090087..23289408)
Genome browser
AA seq
1507 aa
AA seq
DB search
MDLFEFDFFRDWELEQPCHLESDRSALKRREWERRTQEVQQDEDLFSTGFNLFGEPYKTN
KGDALASRVQNTLGSYEEMKDLLTSHSNQSHLVGIPKGSTANNLPQTPSFSERPAVDSQL
FNEALRGDVSGGGAEGRGEKRTGSVPSSSSSCSAPMQPPAVASSATLTHQSLKKTRNSMD
WSRGCHGQSTQATGLVLGSGQNRQGQLSSGATGSRGKVTTIEEQQIQRHEELFSSLKDVL
GLKDDSSPSSSSSSSSSSSSSRRQSSHSSKTQSLPDGGSFRSSTTDGCHFKSSSNIENGG
SFKSSPYENETGSQLSLNSSPLASTSILTTPTPGLTTPTSGLTTPTFPPGALSGKPIAVQ
QKPTAYVRPMDGQDQTPMDSPQLKPPLVAAEGFNNGQPFSGTSGNAKNKLPKLSLSHTEE
VSLPNDSSCVEEILREMTHSWPPPLTAIHTPGKADQTKFPIPNKEAQHVTSSYNTQKRCP
VSANKPAAKAPTAPQKSMLEDDLKISSDEEEVEQVSDKNKARGTTASGGSGSSSESESSS
ESDTDESESSSSDSEYNQASRTNTPEPEPPSTNKWQLDSWLNKVQAQTKPLPPPQQEHRG
TGSSSQDSQPFSPRSEAAGAGTAAKSKPSGSSSVPVPAAPVVEHKDTRATFCSSGREKAK
AKINQKASGESQRSKIRLSPGLLSGQEVTTPRRTTTGKKQPVGRVERSASGEDNQNQTWS
RSNQHSPASRDKDLLPPPPLEHQNPPRPRSKPPSGKTAPRKEPRSATNPNNNATTPPAAL
QPSAAPAPAVTVNQDKKKHRGPSTRITPKSREFIETDSSSSSSECQSDAEEAVKIPALPA
QTTRSAINTQTLSSTHMHTALLPCPGSANTVGTFGRTGFRVKDGSSLTTNGSSSVSSSSS
SLSISTISSSFGISVPDPGGTGGQSKAEPLSPSNVGQEVAPSPLREYHEIQSLWVKIDLS
LLSRVPGQGVGERSRVGIAERDESEGRDRERLKPNKGEGQVEENERLVLLREGQADRDDR
DRFGFAERDRTRDREKICQGLGILDNPSAQEHGNPRPSGRGEAAEGGAKNRRQSTANTPL
PVEKHASKSKRKHKLDHGESSVRGSKKARLDKDCLLLPPCISPIHNHKNSSTDSFNRKQT
RRHDDKMLPPLLSPLSDEPPRKTTCDSSAPISQEGGAPGRLPCSSAPTSSSCHRHKRGEG
KASSHMRNGIEMNSHGDKLCGEGHHANSQSGSEVWLEPTMDSTEPRRPKLSFTDTVRGAD
YYMQEAKRLKHKADALMDKFGKAVNYADGALSFIECGNAMERDPLEAKSPYTMYSETVEL
IRYAMRLKNFTSHSATVLEKRLAVLCNRCQSLLYLRMFHLKKDHAVKYSRSLMEYFKNSA
KSSHQAPSPWRTNGKVNGTPSPLSLSPSPASSGGATGGGGGASGSSGSVAIPQRIHHMAA
SHVNITNNILRSYEHWETADRLATDSHDFFQELDAVMEPLSQQSSMTELVRYVRQGLHWL
RIEAHLL
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggacctctttgaattcgactttttccgggactgggagctggaacaaccctgtcatctg
gagtcggatcgcagcgccttgaagaggagggagtgggagaggaggacccaggaggtccag
caggatgaagacctcttctcaacgggatttaacctgttcggagagccctataaaactaat
aaaggtgacgccttggccagccgtgtccagaacacgttgggttcctatgaagaaatgaag
gacctgctaaccagccactccaaccagagtcacttggtggggattcctaaaggtagcacc
gccaacaacctgccacaaacgccgagcttttctgaaagacccgccgtggactcccagctt
ttcaacgaggccctaagaggagacgtgagtggaggaggagcagagggaagaggagagaag
aggacaggaagcgtgccatcttcatcatcgtcatgctcagctcccatgcagccaccggct
gtggcgagctcagcaacactcacacatcagagtttgaaaaagacgaggaactccatggac
tggtcaaggggttgccatggacagagcacccaggcgacaggcctcgttttggggtcgggg
cagaacagacaggggcagctttcgtcaggagccaccggcagcagagggaaagtcactacg
atagaggagcagcaaatacagagacacgaggagctgtttagttcacttaaagatgtactg
ggcctgaaagatgattcaagcccctcttcctcctcgtcatcctcttcttcctcatcttcc
tctagaaggcagtcttctcactcatctaaaacacagtccctcccagatggaggaagtttc
cgctcgtccaccacagacggttgccacttcaagtcttcctccaatatcgaaaacggcgga
tctttcaaatcgtcaccttatgaaaatgaaactggttctcagctttcgctaaactcctcc
ccattggcctccacctccattctgaccactcccactcccggcctaaccactcccacgtca
ggactgaccacgcccactttccctcctggtgctctgtcagggaagccgattgctgtgcaa
cagaaacccacagcgtacgttcgaccaatggatggccaggaccagacaccgatggactct
ccgcagcttaaaccccccctagtggctgcagaggggtttaacaacggccagcctttcagc
gggacttcaggaaatgcgaagaataaactgccaaagctgagtctcagtcacacggaggag
gtcagccttccaaatgactccagctgtgtggaagagatcttgcgggagatgacccactcc
tggccccctcctctcacagccatacacactcccggaaaagcggatcaaaccaagtttccc
atcccaaacaaggaggcgcagcatgtgacgtcaagctacaacactcagaagagatgccct
gtatcagctaacaagcctgctgctaaagcaccaacggctccacagaagtcgatgctggag
gatgacctgaagatcagcagtgatgaagaagaggttgaacaggtgtctgacaagaacaaa
gccagaggcacaacggcgagtggcggatcggggagcagcagcgaatcagagagcagctca
gagtccgacaccgacgagtcagagagcagctccagcgacagcgagtacaatcaggcgtcc
cgcacaaacaccccagagcctgagcccccttccacaaacaaatggcagcttgacagctgg
ttgaacaaagtccaagctcaaaccaaacctctgcccccccctcagcaggaacaccgtggc
acaggctccagcagccaggactcgcagcctttctctcccaggagcgaagcagcaggagcg
ggaaccgctgccaagtccaaacccagcggctccagcagcgtgccagttcctgctgctcct
gtggtggagcacaaagataccagggcgaccttctgcagctctggcagggagaaagccaaa
gcaaagatcaaccagaaggcctcaggggagagccagagatccaagatccggctgtcgccg
ggcctgctgtcgggccaggaggtcacaaccccgcggaggaccaccactgggaagaagcag
ccggtcgggcgggtggagcggtccgccagcggcgaggataatcagaaccagacgtggagc
agatcaaaccagcacagccccgcttctcgagacaaggacctgttgcctccccctcccctg
gagcatcagaaccccccgaggccgcggagcaaacctcccagtgggaaaacggccccgagg
aaggaacctcgcagcgcaaccaacccaaacaacaacgcgaccactccaccagcagctctg
cagccgagcgccgctccggcaccggctgtcactgtaaaccaggacaaaaagaaacaccga
ggccccagcaccagaatcacaccaaagtcccgggaattcatcgaaacagattcctcctcc
tcctcgtcggaatgccagtcggacgcagaggaagcagtcaaaatccccgccctgccggct
cagaccacacgctccgccatcaacacacagactctgtccagcacacacatgcacacggcc
ctcctgccgtgccccggctccgccaacactgtgggaacgtttgggaggacgggattccgg
gtcaaagacggtagcagcctgacgactaatggtagcagcagcgttagcagtagcagtagc
tctctgagcatcagtactatcagcagttcttttggcatctcagttcctgatcctgggggg
acaggcgggcagagcaaagcggagcccctgtcaccttctaatgtggggcaggaggtggcg
ccgtcgcccctgagggagtaccacgagatccagagtttgtgggtgaaaattgacttgagt
ttgctcagcagggtgccaggtcagggtgtgggggaaagatccagagtgggaattgccgaa
agagatgagagcgaagggcgagacagagaaagactgaagcccaacaaaggggagggacag
gtggaggaaaacgagagattagtgctgctcagagaagggcaggccgacagagacgacagg
gaccgcttcggctttgcagaaagagacagaacaagagacagggagaagatttgccaaggt
ctggggatcctggacaacccctctgcgcaggaacacggtaatcccaggccgtctggaaga
ggagaggcggcggagggcggagcaaaaaacagaagacaatccaccgcaaacacgccgctt
ccagtcgaaaaacacgccagcaagagcaaaaggaaacacaagctggatcacggagaatct
tcagtacggggcagtaagaaggctcgcctggacaaagactgtctgctgctgccgccctgc
atctccccaatccacaaccacaagaacagctccacagactctttcaatcgaaagcagact
cgacggcacgacgataagatgctcccgccactgctgtcccccctttccgatgagcctccc
aggaaaacgacctgtgacagcagtgctcccatcagccaggagggcggcgcccccgggagg
ctgccctgctcctctgcccccacctcatcctcctgtcacagacacaagaggggggaagga
aaggcttcctcacacatgagaaacggcattgaaatgaactcccatggcgataaactgtgt
ggagaaggtcaccatgccaacagtcagtcgggctcagaggtttggttggaaccgacgatg
gactcaactgaacctcgcaggccaaagctgtcatttactgacacggtccgcggtgcagac
tactacatgcaggaagcaaagagactgaagcacaaggccgacgctctgatggacaaattt
gggaaagcggtgaactacgcagatggtgccctctccttcatcgagtgtggaaacgccatg
gagcgagacccgctggaggccaaatcgccatacaccatgtactccgagactgtggagcta
atcaggtacgccatgaggttgaagaacttcaccagccattcagccacggtcttggagaag
agactagctgtgctgtgtaaccgctgtcagtctctgctgtatctgaggatgttccatctg
aagaaagaccacgctgtcaagtactcacggtcgctcatggagtactttaagaattcagcc
aagagttcccaccaagcgccctctccctggaggaccaatggaaaggtcaacgggaccccg
tcgcctctttctctcagcccgtctccagccagcagcggaggagcaacaggaggaggagga
ggagcatcggggtcatcgggaagtgtggcaatcccccagaggatccaccacatggctgcc
agtcacgtcaacatcaccaacaacatcctgaggagctatgaacactgggagacggcggac
agactggccaccgacagccacgacttcttccaggagctggacgccgtcatggagcctttg
agtcagcagagcagcatgaccgagctggttcgttacgtcaggcagggactgcactggctc
cgcatcgaggctcacctcttgtaa
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integrated database retrieval system
