Oryzias melastigma (Indian medaka): 112153297
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Entry
112153297 CDS
T07439
Symbol
tcirg1b
Name
(RefSeq) V-type proton ATPase 116 kDa subunit a3 isoform X1
KO
K02154
V-type H+-transporting ATPase subunit a
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00190
Oxidative phosphorylation
oml01100
Metabolic pathways
oml04142
Lysosome
oml04145
Phagosome
Module
oml_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
112153297 (tcirg1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112153297 (tcirg1b)
04142 Lysosome
112153297 (tcirg1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112153297 (tcirg1b)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112153297 (tcirg1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V_ATPase_I
Takusan
APG6_N
Motif
Other DBs
NCBI-GeneID:
112153297
NCBI-ProteinID:
XP_024139157
Ensembl:
ENSOMEG00000004371
UniProt:
A0A3B3BEH9
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Position
LG10:complement(15128693..15135885)
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AA seq
829 aa
AA seq
DB search
MGSMFRSEEVCLVQLFLQSGSAYNCVSELGELGLVEFRDLNPNVNAFQRKFVGEVRRCEE
LEKTFTFLEQEISRSLSPPLQGPLPLPCPMPSAPQPRELITIEEESERLARELKEVSRNR
DSLRAQLTQLCQYKGVLNKTHSITASHAPPPALENHGLFDNRQDVRLSFVAGVVHPWKVP
SFERLLWRACRGYIIVDFREMDQRLEHPDTGEMVQWTVFLISFWGDQIGQKVKKICDCFH
TQTFAYPESPAEREEILQGLNTRIEDIKSVLSQTESFLQQLLLRAVAILPQWKVRVQKCK
AIQMVLNLCSPSVTDKCLIAEAWCPTAKLPELQSALREGGRKSGSGVDSFYNRLPTSTPP
PTLFPLNSFTAGFQNIVDAYGVAGYREVNPAVYTIITFPFLFAVMFGDVGHGILMSLAAL
WMVLEEKDPKLKNSNNEIWKMMFGGRYLILLMGLFSIYTGAIYNECFSRSLSTFASGWHV
GPMFDKNIWNTSVLEGNKFLSMDPAVSGVFTSPYPFGIDPVWGMANNKLTFLNSYKMKMS
IIIGVIHMTFGVCLSFFNYWHFKKISSVFFILIPELFFMLCLFGYLVFMVVFKWIAYTPD
QSKIAPSILIHFINMFLFIDNPDNPQLYKGQLVVQKVLVVLALCSVPVLLLGKPIWQYVT
FKRRRQHLQHQDEDRRPLVTEDGSVNTRQGEVEGGAPAEEEEFDVADVFMHQAIHTIEYC
LGCISNTASYLRLWALSLAHAQLSEVLWTMVMHMALRWPGYVGSAVLVLIFVFFAVLTVS
ILLVMEGLSAFLHALRLHWVEFQNKFYSGDGYKLMPFSFTSLIHASAAI
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgggttccatgtttcgtagtgaagaggtgtgcctggtgcaactcttcctccagtccgga
tcggcctacaactgcgtcagtgagctgggagagcttggtctggtggagttcagagattta
aatcccaacgtgaatgctttccagaggaagtttgtgggtgaggtcagacgatgtgaggaa
cttgagaagacgtttaccttcctggagcaggagatcagtcgctccttgtctccgcccctt
cagggtcctcttcctcttccctgcccgatgccctctgccccgcaaccacgtgagctcatc
accatagaggaggagagtgagaggttggccagggagctcaaggaggtttctaggaataga
gacagccttcgggcccagctgacccaactctgtcaatacaaaggagttctgaacaaaact
cactcaatcacagcctcacatgctccgccccctgcactcgaaaaccacgggctgtttgac
aaccgccaagatgtccgtctcagttttgtggcgggagtggtgcacccatggaaggtgccc
tcgtttgagcgcctgctttggcgagcgtgtcgtggctacatcatcgtggattttagagag
atggaccaacggctggaacacccagacaccggagaaatggtgcaatggactgtgttcctc
atttctttctggggcgaccagattgggcaaaaagtgaagaagatatgtgattgtttccac
acacagacatttgcatatcccgagagcccagctgaaagagaggaaattcttcagggcctt
aataccagaattgaagacattaaatcagtgctgtctcagactgaatccttcctgcagcag
ctgttgttgcgagcggttgccattctcccccagtggaaggtgcgagtccagaagtgcaaa
gcaattcagatggtgttgaatctctgcagcccgtctgtcacggacaaatgcctgattgca
gaggcctggtgtcccactgccaagctgcccgagctgcagagcgccctcagagagggaggg
aggaaaagcggcagcggggttgactccttctacaaccgcctgcccacttccactccacct
ccaactctgtttcccctcaactctttcacagctggcttccagaacattgttgatgcctac
ggagtcgccggataccgcgaggtcaacccagcggtgtacaccataattacattccccttc
ctgttcgccgtcatgtttggggatgtgggtcatgggattctcatgtctctggctgctctc
tggatggtccttgaggagaaggaccccaaactcaagaacagtaataatgagatctggaag
atgatgtttggaggacggtatctgattctcctgatgggattgttctccatctacaccggt
gccatttacaatgagtgctttagcagaagtctgagtaccttcgcttcaggatggcatgtt
ggccccatgtttgacaagaacatctggaatacatccgttttagaggggaacaagttcttg
tccatggatcctgctgtgtctggcgttttcaccagcccgtacccatttggaattgaccca
gtttggggcatggctaacaacaaactaaccttcttaaactcctacaagatgaagatgtcc
atcatcatcggcgtcatacacatgacttttggagtctgcttatcgttcttcaactactgg
cactttaagaagatcagcagcgtgttcttcattctgatcccagagcttttcttcatgctg
tgtctgttcggatacctggtgttcatggtggtctttaagtggattgcctacacccctgat
cagtccaaaattgctcctagtattttaatccactttataaatatgttcctcttcatcgac
aacccagacaacccgcagctttacaagggacagctggtggtgcagaaggtcctggtggtg
ctggctctctgctccgtcccggtcctgctgctggggaagcccatctggcaatacgtcaca
ttcaagagaagacgacaacacctgcagcaccaggacgaagacagacgcccgctggtgacg
gaggacggctctgtcaacactcgccagggggaggtggagggtggagctccagcagaggag
gaagagtttgatgtcgcagatgtgttcatgcatcaagccatccacactatagaatactgc
ctgggctgcatctccaacacggcgtcgtacctgcgactctgggccctcagtttggctcat
gcacagctgtcagaggtgctgtggacgatggtcatgcatatggctctgagatggccgggc
tatgtggggtctgccgttctagtcctcatttttgtcttttttgctgtgctaacggtttcc
atcctcctggttatggaaggcctctcagctttcctgcatgctctccgtcttcactgggtg
gagtttcagaataagttctacagtggagacggctacaaactcatgcctttctccttcacg
tctttaatccacgcctctgcagcgatatga
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