Oryzias melastigma (Indian medaka): 112153302
Help
Entry
112153302 CDS
T07439
Symbol
arhgef6
Name
(RefSeq) rho guanine nucleotide exchange factor 6 isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04518
Integrin signaling
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
112153302 (arhgef6)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112153302 (arhgef6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112153302 (arhgef6)
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112153302 (arhgef6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_1
SH3_9
RhoGEF67_u1
CH
PH
Mis12
ZapB
ENTR1
CENP-Q
Motif
Other DBs
NCBI-GeneID:
112153302
NCBI-ProteinID:
XP_024139163
Ensembl:
ENSOMEG00000016932
LinkDB
All DBs
Position
LG10:10489977..10524767
Genome browser
AA seq
767 aa
AA seq
DB search
MNPEEQTVTWLISLGVLSSPKKNIADPEEFLKASLKDGVVLCKLTERLVPDFTPKCFQEP
RTEAECISNIREFLKGCSSLKVEGFEPECLYTGENFGKVLTTLLAFNFATQDCAVERCPQ
SASSSPNQATSLHTQASIKSKGSLRRQSKSGEMSENGGGGQLLVKARFNFKQNNKDELSF
SKGEVILVTRQEEGGWWEGTLNGTTGWFPSNYVREVKPCEKPLSPKGTQLTKNYYMVVVQ
DILEHEREFVKELQTVLTCYLRPLQACDKLATADSATLCGNLEEILTFQQDLCSALEECT
KVPEGQQRVAACYLNLMPQIKNLYLTYCSSHPSAVCILTDHSEELVKFMENQGASSPGIL
NLTTSLSKPFMRLDKYPTLLQELERHVEEAHPDYPDILKATAAFRSLVAQCQELRKRKNL
ELQILSEPVRGWEGDSMRSLGPVAYMSQVHIRNGCSEEKEERYLMLFPNLLVILSASPRM
SGFIFQEKLSLAGTTVTRHVEEEAFDITGGMMERITVFCSSAQDLQEWLEHLQPFTKGGS
PASTITKTVDVKPASMVGTPTHMSHLGSFSAASRGPLEPPKMSKPWSLSCLRPAPPLKPS
AALGYKERMSYIMKDISKSPRPMKKFLPGNRKKERKPSDDEFQMRKSMAALEEDAQILRV
IEAYCTGVSLQTTTAVRKECIPQVLLPEEEKIIVEEMKSNGQTVTEEKSLVDAVYALKDE
VHELKKENKWMKQFLEEEQKSRKELERLVRKLSKQQKNDCAWEDGGH
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaggagcagacggtaacgtggttgatctcactgggggtgctcagctcgccc
aaaaagaacatagcggacccggaggagtttctgaaagcatccctgaaggatggggtcgtc
ctgtgcaagctcacggagcgactcgtacccgactttactcccaagtgttttcaagaacca
agaacagaggcggaatgcatctccaacatccgagaattcttaaaaggatgctcgtccttg
aaagtagagggctttgaaccagagtgtctatacactggagagaatttcggcaaagtcctg
actactttgctggcgttcaactttgctacccaagactgtgctgttgagagatgtccacag
tctgcttcgtcttctcctaaccaggcgacttctttacacactcaggcctccatcaaatcc
aaaggctctctaagaagacagtccaaatcaggggaaatgtcagagaacggcggtggcgga
cagctgctggtaaaggcccgctttaacttcaagcagaacaataaggacgagctgtccttc
agcaaaggtgaggtgatcctggtgacgcggcaggaggagggaggatggtgggagggcacg
ctcaacggcacgacaggctggtttccaagcaactacgtccgtgaggtcaaaccctgtgaa
aagccattgtctcctaaagggactcaactgaccaagaactattacatggtggtggtccag
gatatcttggaacacgagcgagaatttgtcaaagaattgcaaacagtcttgacgtgttac
ttgcgacccctgcaagcctgcgacaagctggccactgccgacagcgccaccctatgtgga
aatctagaagagattctcaccttccagcaggacctgtgctcagctttagaggaatgtaca
aaagtcccggaggggcagcagcgggtggcagcctgctatttgaacctcatgcctcaaatc
aagaacctttacctgacctactgctccagccacccctccgctgtctgcattctgacggac
cacagtgaggagctcgtcaagttcatggaaaaccagggggccagttctccgggaatcctg
aacctgaccaccagcctcagcaagcctttcatgaggctcgacaaataccccaccctgctg
caggagctggagaggcacgttgaggaagctcatccagactaccctgacattctaaaagcc
acggcagcattcaggagcctcgtggcgcagtgccaggaactacgaaagcgcaagaatcta
gagctgcagatcttgtcggagccggtgcgaggctgggagggagacagtatgaggagcctg
ggaccggtggcctacatgtcccaggtccatataagaaacggatgcagtgaggaaaaagag
gagcgatacctgatgctattcccaaatttgttggtaatactctctgctagtcctcggatg
agtggcttcatttttcaggaaaagctctcgctggcaggaaccacagttaccaggcatgtg
gaagaggaagcttttgacatcacaggaggcatgatggagcgcattacggtgttctgcagc
agtgcccaggacttgcaggaatggctagaacacttgcaacctttcaccaaaggaggaagt
cctgctagcaccatcacaaagactgttgatgtgaagccagcaagcatggtcggtaccccc
acccacatgtcccacctgggcagtttcagcgctgccagtcgcggacccctggagccgcca
aagatgagcaaaccctggtctctaagctgtctgcgcccggctcctcctctcaagccctcc
gctgccctcggctacaaggagaggatgtcttatatcatgaaggacatcagcaaaagccca
cgaccgatgaagaagttcctgcctggcaacaggaagaaagagcgcaagccatctgatgac
gaatttcagatgagaaaaagcatggctgctctggaggaggacgctcagatccttcgggtg
attgaggcctattgcacaggagtcagcctccagaccaccacagcagtgcggaaagagtgc
atccctcaggttcttctcccggaggaagagaaaatcatcgtggaggaaatgaaaagcaac
gggcagacggtcactgaggaaaagagcctggtggatgctgtgtacgctctaaaggacgag
gttcacgagctgaaaaaggagaataagtggatgaagcagttcctggaggaggagcagaag
tctcgcaaagagttggagagattagtccggaagctgtccaagcagcagaagaacgactgt
gcttgggaggacggcggccactaa
DBGET
integrated database retrieval system
