Oryzias melastigma (Indian medaka): 112153306
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Entry
112153306 CDS
T07439
Symbol
csf1ra
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112153306 (csf1ra)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112153306 (csf1ra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oml01001
]
112153306 (csf1ra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oml04090
]
112153306 (csf1ra)
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
112153306 (csf1ra)
Protein kinases [BR:
oml01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
112153306 (csf1ra)
CD molecules [BR:
oml04090
]
Proteins
112153306 (csf1ra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
C2-set_2
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
112153306
NCBI-ProteinID:
XP_024139173
Ensembl:
ENSOMEG00000004681
UniProt:
A0A3B3D2V9
LinkDB
All DBs
Position
LG10:15329896..15339715
Genome browser
AA seq
983 aa
AA seq
DB search
MRPYLTLLLLMVAPTTSVERRRPVIKLSSRLVGSSEVVIKTGSILDLRCEGDEPVNWQPR
LAKHRRYVSRGGGTVRTFKVDRATAEFTGTYKCFYTARSQSPNLTSWIHVYVKDPNRVFW
TSSTSLRVVKKEGEDYLLPCLLTDPSATELGLRMDNGTSVPPGMNFTIYRHQGILIHSLH
PNFNADYVCTARVNGVEKTSKAFSINVIQRLRFPPYVFLEQEEYIRIAGEEIRIPCTTHN
PNFYYNVTWKYTTKSNPKIEEKVRSNGENRLDIESILSIAAVDLADTGNISCIGTNEAGV
NSSTTYLLVVDKPYIRLSPQLSPKLAHKGLSVEVNEGEDLELSVLIEAYPRITEHRWHTP
TSPNTYTQEHKFIRYNNRYHATLQLKRMNIHEQGEYTFNVRSELANASITFQVQMYQRPV
AVVRWENVTTLTCTSFGYPAPRIIWYQCLGIRPTCNENTTGLQLAIPLQAPTVEVQREEY
GAVEVESILTVGPSSQRMTVECVAFNVVGVSSDTFAMEVSDKLFTSTLTGAAGVLAIFLI
LLVVLLYKYKQKPRYEIRWRIIEARDGNNYTFIDPTQMPYNEKWEFPRDKLKLGKILGAG
AFGKVVEATAYGLGKDDNVMRVAVKMLKTSAHSDEREALMSELKILSHLGHHKNIVNLLG
ACTYGGPVLVITEYCSLGDLLNFLRLKAETFANFVLNVPDMEESSSDYKNVCSQKQFIRS
DSGISSSASSSYLEMRPCVLPNADSSQEPCPESECEESGEWPLDMDDLLRFSYQVAQGLQ
FLAEKNCIHRDVAARNVLLTSHREAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI
FDCIYTVQSDVWSYGILLWEIFSLGKSPYPSMAVDSRFYKMVKRGYQMPQPDFAPPEMYG
IMKMCWNLEPTERPTFSKISQMIEQQLGGQLEPSQVIYQNMQQQVTEGEECDELKCYNVP
CDQSCDNEEEEQLLMKTNNYQFC
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcggccctacctcacactgttgctgctgatggtggcgcccaccacttcagtggaacgg
aggcgtcctgtgatcaaactgagttctcggttggtggggagctctgaggtggtgataaaa
actggtagcattctagatttgagatgtgaaggtgatgagccagtgaactggcagcccaga
ctggccaaacacagacgctacgtgtcccggggcggcgggactgtccgcacctttaaggtg
gatcgagccacagcagagttcactggaacgtacaagtgcttctatactgccaggtcacaa
tcccccaacctgacctcctggatacatgtctatgtaaaagatccaaaccgggtgttctgg
accagcagcacatctctgagagtggtgaagaaggagggtgaagattacctgctgccctgt
ctgctcactgacccctcagccacagagctgggcctcaggatggacaacggcaccagcgtc
cccccaggaatgaactttaccatctataggcaccaaggcatcctcatccacagcctccac
cccaactttaacgccgactatgtctgcacagccagggtcaacggggtggagaagacctcc
aaggccttttccatcaatgttattcagagacttcgattccctccatacgtcttcctagaa
caagaagaatacatacgaattgccggagaagaaattaggatcccctgcacgacacacaat
cccaacttctactacaatgtcacttggaagtacaccaccaaatcaaatccaaagatagaa
gagaaggtccgctccaatggggagaatcgcctggacatagagagcattctgagtattgct
gcagtggaccttgcagacacaggaaacatctcctgcattggtactaatgaagctggggtg
aacagttcaaccacatacctgttagttgtagacaaaccctacatcaggctgtcaccccag
ctgtcacctaaactggcacacaagggtctgtcagtggaggtgaatgaaggagaagatctg
gagctcagcgtgctcatcgaagcctatccacgcattacagagcacagatggcacacccct
acatctcccaacacatacacacaggaacacaagttcatccgatacaacaacagataccac
gctaccttgcagcttaagagaatgaacatacacgaacagggagagtacacctttaacgtc
cggagcgagttggccaacgcgtccatcacatttcaagtccagatgtaccagagacctgtt
gctgtggtgcgatgggaaaacgtaaccactctgacatgcacttcatttgggtacccggct
ccgaggatcatctggtatcagtgtttgggaataagacccacgtgcaatgaaaacaccaca
ggcttgcagttggcaatccccctccaggctcccactgtggaggtccagagggaagagtac
ggcgctgtggaggtggagagcatcctcactgtggggccatccagccagaggatgacagtt
gaatgcgtggcttttaacgttgtcggtgtgagcagtgacacatttgctatggaggtctct
gacaaactgtttacctccaccctgactggagcggcaggtgttctggcaatctttcttatt
ctgctggttgtattgctttacaaatacaagcagaaacccaggtatgagatacgttggagg
attattgaggccagagacggcaacaattacacctttattgacccgacacaaatgccctac
aatgaaaagtgggagttcccgagggacaaactcaaactagggaagatcctgggtgctgga
gcatttgggaaggttgttgaggccacagcttatggtctgggaaaggatgacaacgtgatg
cgtgtagctgtgaaaatgttaaaaaccagtgctcactcagatgaaagggaggccctaatg
tctgagctcaagatcctcagccaccttgggcatcacaagaacatagtcaacctcctcgga
gcctgcacctacggaggacctgttcttgtgataactgagtactgcagccttggcgacctc
ctgaactttcttcgcctgaaggcagagacatttgcaaattttgttttgaatgtccctgac
atggaggagagctccagcgactacaagaacgtctgcagtcagaagcagtttataagaagt
gacagtgggatatccagttcagcctccagcagttacttggagatgaggccctgcgtgctg
ccaaacgcggactcatcacaagaaccgtgtccagagtctgaatgtgaggaaagtggcgag
tggccgctggacatggatgacctgctgagattctcatatcaagttgctcaaggccttcag
tttttggctgaaaaaaattgcattcacagagatgtagctgcaagaaatgtcctcctgacc
agtcacagagaggcaaagatttgtgactttggcctggcgagggacatcatgaacgactcc
aactatgtggttaaaggcaacgcccgtctgccagtgaagtggatggctccagagagcatc
tttgactgcatctacactgtccagagtgacgtctggtcttacggcatcctcctgtgggag
atcttctctttaggcaaaagcccttatcctagcatggctgtggactccaggttctacaag
atggtaaagcgtggctaccagatgcctcaaccagactttgctccacctgaaatgtatggg
atcatgaagatgtgctggaacctggagccaacggagcgtcccacttttagcaaaatcagt
cagatgattgagcagcagcttggtggacagcttgagccaagtcaggtaatctaccagaat
atgcagcagcaggtcactgagggtgaggagtgtgatgagctcaagtgctacaacgtcccc
tgtgaccagtcttgtgacaacgaggaagaggagcagcttttaatgaagaccaacaattat
cagttttgctga
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integrated database retrieval system
