KEGG   Oryzias melastigma (Indian medaka): 112153366
Entry
112153366         CDS       T07439                                 
Symbol
cntn1b
Name
(RefSeq) contactin 1b
  KO
K06759  contactin 1
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112153366 (cntn1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oml04515]
    112153366 (cntn1b)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:oml00537]
    112153366 (cntn1b)
Cell adhesion molecules [BR:oml04515]
 Immunoglobulin superfamily
  Contactins
   112153366 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:oml00537]
 Others
  112153366 (cntn1b)
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig fn3 V-set Ig_DSCAM-DSCAML_C C2-set_2 Ig_4 Pur_ac_phosph_N
Other DBs
NCBI-GeneID: 112153366
NCBI-ProteinID: XP_024139315
Ensembl: ENSOMEG00000012070
UniProt: A0A3B3BYL7
LinkDB
Position
LG23:10136804..10155447
AA seq 1042 aa
MTFTALLLLLVSSSVPAAVAVLFNEPRIFGEDATGYGPIFEEEPVDVVYTEDSPDKRISM
NCRARANPPASYRWRRDNWEIKLMEQPDEHYSLVGGNLVITNPIHKKHAGTYVCVARNIY
GTVISKEARVKFGFVEEFPDEEREPVRVKEGQGVVLLCVPPKAWPEEVTYRWIYNEFPVF
LHTDRRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPIIGKSVYSKFTTLIPLPPDDGEER
KYPADISVKFGDTTAMLASNITLECFALGNPIPHIVWRKVDSTDLPANHEISESGAVLHL
YNVQYEDVGGYECEAINTKGKDWHKAWLYVESAPEWAETINNTQVDIGSEHTMRCVASGK
PFPFIRWYKDGYMYGKGELKFSSLTFDDSGMYQCIAENYWGIKYANAELRVIACAPTFEF
NPVKKQLLGAKDGRVLIECKPRAAPRPRFIWKKGDELLFNSTRISVMIDGTLEIRNATKN
DEGLYTCFAENDRGKANNSGYLTITEATSITIAPEDSEVKVGDEVILRCSASFDPMLDIT
FVWAIDFRVIDFDSEWQHYERVMNQDGTGDLRIKNAQIWHEGRYTCTAQTVVDSDTAYAD
LKVVGVPGPPGVIRVEEIGDTWVKLLWTKGAEHNSPILYYTVQTRHFWALNEDDWKNAST
SPTILDGTMERAEVTDLYPWLEYQFRIFATNEYGSGEASIPSLKIKTWDAPPVVSPTDVA
GYGGRNGEIVITWTPVQPWFFSGKKFGYIVAFKPHDAYDWWYETISDPETRRYAHKDTYF
VPTEEDFQVREFQVKIKSFNVKGDGPYSLTKVIYYPRDVPTESPTDIYARPVSSTEAVVW
WLPVVDTGTGLQQYVEGYQVKYWRKYDDPEPGANRIFVPATANQTRLENMLPDAHYLIEV
RAFNGAGLGPPGEHCEMFTKRPPPPEPPRMWRYVSWTGKWLYVWWDHIQYDWFGNISFPL
YYKVMFRKTGYYYGKVYITGWHFMDFPMPQVGDFELMVRGRYEGGDGPIRKIRIKGAAPT
MTPALSMVSMVLLALCTAGLQI
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgacttttactgctctgctgctgctgctcgtctcctcctctgttcctgctgcagtggcg
gtgttgttcaatgagcccaggatttttggagaggatgccacgggctacgggcccatattt
gaagaggagccggtggatgtggtctacacggaggactccccagataagaggatttccatg
aactgccgggcacgtgccaacccaccggcgtcctacaggtggcggcgcgataactgggag
atcaagctgatggagcagccggacgagcattacagtctggttggggggaacctggtcatc
accaaccccatccacaagaaacacgccgggacgtatgtgtgcgtggccaggaacatctac
ggcaccgtcatcagcaaagaggccagagtcaagtttggatttgtggaggagttccctgat
gaggaaagggagccggtccgtgtgaaggagggacagggggtggtcctcctgtgtgttccc
ccaaaagcctggcctgaggaggtgacctaccgatggatttacaacgagttccccgtgttc
ctgcacacggatcgccgccgctttgtctcccagaaaacagggaatctttacatctccaag
gtggaagctcaagacgcaggaaattactcctgcttcgtctccagccccatcattgggaag
agtgtgtactcaaagttcaccactctcatcccgttacctccagacgacggtgaggagaga
aaatatcctgcagacatcagtgtcaagtttggcgacaccacagccatgctggcctccaac
atcacccttgagtgctttgctctcggaaatccgatcccccatatcgtttggaggaaagtg
gattcgacggatctcccagcaaaccacgaaattagcgaatcaggagccgtgcttcacctg
tacaacgtgcagtatgaagacgtgggcgggtacgagtgtgaggcgatcaacaccaaaggg
aaggactggcacaaggcctggctctatgtggagtcggctccagagtgggcagagactatc
aacaacacccaggtggacattgggtcggaacatacaatgcgatgtgtggcatcagggaaa
cctttccctttcatccggtggtacaaagacggatacatgtatggtaaaggtgagctcaag
ttctccagtctcaccttcgacgactccggcatgtaccagtgcatcgcggaaaactactgg
ggcatcaaatacgccaacgccgagctccgcgtcatcgcctgtgcaccaacgtttgagttc
aacccggtgaagaagcagctcctcggcgccaaagacgggcgagtgctgatcgagtgcaaa
cccagggcagccccgcgaccccgcttcatctggaagaaaggcgacgagctcctctttaac
agcacacgaatttctgtcatgattgacgggactctggagattcgcaacgccaccaagaac
gatgagggtttgtacacctgcttcgctgagaatgacagagggaaggcaaacaactctggt
tatctcaccatcactgaggctaccagcatcacaatagcacctgaagacagtgaggtgaag
gtgggagatgaggtcatcctcaggtgcagtgcttcattcgaccccatgctggacatcacg
ttcgtctgggctattgacttccgcgtcatcgactttgattctgagtggcaacattatgaa
cgagttatgaaccaagacgggactggcgacctacgaataaaaaatgcccagatttggcat
gaggggcgctacacctgtacagcccaaaccgtggtggacagtgacacagcatatgctgac
ctcaaagttgtaggtgtccccgggcctcctggcgttattcgcgtggaggagattggagac
acgtgggtgaagctgctgtggaccaaaggagcagagcacaacagccccattctctactac
actgttcagacgaggcacttctgggctttgaatgaagacgactggaaaaatgctagtacc
tctccaaccatcctggatggaactatggagagggcagaggtcacagacctgtacccctgg
ctggaataccagttcagaatatttgccaccaacgagtatggatctggagaggccagcatc
ccttccctcaagatcaaaacctgggatgcccctcctgtggtttctcccactgacgtggct
ggatatggaggaaggaacggcgaaatcgtcatcacgtggactcctgtgcagccatggttt
ttctctggcaaaaaatttggctacatcgtggctttcaagccccacgatgcttacgactgg
tggtatgagaccatctccgatccggagacgaggcgatacgctcacaaagacacctacttc
gttccaactgaggaggacttccaggttcgagagttccaagtgaagataaagtctttcaat
gtgaaaggagacggaccctacagcctcaccaaagtcatctactatccaagagatgttcca
acagagtctcccacagacatctatgcccggccagtgtcctccaccgaggctgtggtttgg
tggctgccggtggtggacacaggaacaggcctgcagcagtacgttgaaggataccaggtt
aagtactggaggaagtatgacgacccagaaccaggagccaatcgcatattcgtcccagca
accgccaaccagaccaggctggagaacatgctgccggacgcgcactacctcattgaggtc
cgggccttcaacggggccggcctcgggcctcccggagagcactgcgagatgttcacaaag
agaccaccaccaccagaaccccccaggatgtggcgctacgtcagctggacaggaaagtgg
ttgtatgtgtggtgggaccacatccagtacgactggtttggtaacatctccttccctctg
tactataaggtcatgttcagaaaaacaggctactactacgggaaggtctacatcaccggt
tggcactttatggacttccccatgcctcaggttggagactttgagctgatggtgcgcggc
cgatacgaagggggggatggcccaatcaggaagattcggattaagggtgcagctcccacg
atgacgcccgctctcagcatggtgtcgatggtgctgctggcgctgtgcaccgcgggactt
caaatttag

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