Oryzias melastigma (Indian medaka): 112153366
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Entry
112153366 CDS
T07439
Symbol
cntn1b
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112153366 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112153366 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
112153366 (cntn1b)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
Contactins
112153366 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
Others
112153366 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_4
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
112153366
NCBI-ProteinID:
XP_024139315
Ensembl:
ENSOMEG00000012070
UniProt:
A0A3B3BYL7
LinkDB
All DBs
Position
LG23:10136804..10155447
Genome browser
AA seq
1042 aa
AA seq
DB search
MTFTALLLLLVSSSVPAAVAVLFNEPRIFGEDATGYGPIFEEEPVDVVYTEDSPDKRISM
NCRARANPPASYRWRRDNWEIKLMEQPDEHYSLVGGNLVITNPIHKKHAGTYVCVARNIY
GTVISKEARVKFGFVEEFPDEEREPVRVKEGQGVVLLCVPPKAWPEEVTYRWIYNEFPVF
LHTDRRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPIIGKSVYSKFTTLIPLPPDDGEER
KYPADISVKFGDTTAMLASNITLECFALGNPIPHIVWRKVDSTDLPANHEISESGAVLHL
YNVQYEDVGGYECEAINTKGKDWHKAWLYVESAPEWAETINNTQVDIGSEHTMRCVASGK
PFPFIRWYKDGYMYGKGELKFSSLTFDDSGMYQCIAENYWGIKYANAELRVIACAPTFEF
NPVKKQLLGAKDGRVLIECKPRAAPRPRFIWKKGDELLFNSTRISVMIDGTLEIRNATKN
DEGLYTCFAENDRGKANNSGYLTITEATSITIAPEDSEVKVGDEVILRCSASFDPMLDIT
FVWAIDFRVIDFDSEWQHYERVMNQDGTGDLRIKNAQIWHEGRYTCTAQTVVDSDTAYAD
LKVVGVPGPPGVIRVEEIGDTWVKLLWTKGAEHNSPILYYTVQTRHFWALNEDDWKNAST
SPTILDGTMERAEVTDLYPWLEYQFRIFATNEYGSGEASIPSLKIKTWDAPPVVSPTDVA
GYGGRNGEIVITWTPVQPWFFSGKKFGYIVAFKPHDAYDWWYETISDPETRRYAHKDTYF
VPTEEDFQVREFQVKIKSFNVKGDGPYSLTKVIYYPRDVPTESPTDIYARPVSSTEAVVW
WLPVVDTGTGLQQYVEGYQVKYWRKYDDPEPGANRIFVPATANQTRLENMLPDAHYLIEV
RAFNGAGLGPPGEHCEMFTKRPPPPEPPRMWRYVSWTGKWLYVWWDHIQYDWFGNISFPL
YYKVMFRKTGYYYGKVYITGWHFMDFPMPQVGDFELMVRGRYEGGDGPIRKIRIKGAAPT
MTPALSMVSMVLLALCTAGLQI
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgacttttactgctctgctgctgctgctcgtctcctcctctgttcctgctgcagtggcg
gtgttgttcaatgagcccaggatttttggagaggatgccacgggctacgggcccatattt
gaagaggagccggtggatgtggtctacacggaggactccccagataagaggatttccatg
aactgccgggcacgtgccaacccaccggcgtcctacaggtggcggcgcgataactgggag
atcaagctgatggagcagccggacgagcattacagtctggttggggggaacctggtcatc
accaaccccatccacaagaaacacgccgggacgtatgtgtgcgtggccaggaacatctac
ggcaccgtcatcagcaaagaggccagagtcaagtttggatttgtggaggagttccctgat
gaggaaagggagccggtccgtgtgaaggagggacagggggtggtcctcctgtgtgttccc
ccaaaagcctggcctgaggaggtgacctaccgatggatttacaacgagttccccgtgttc
ctgcacacggatcgccgccgctttgtctcccagaaaacagggaatctttacatctccaag
gtggaagctcaagacgcaggaaattactcctgcttcgtctccagccccatcattgggaag
agtgtgtactcaaagttcaccactctcatcccgttacctccagacgacggtgaggagaga
aaatatcctgcagacatcagtgtcaagtttggcgacaccacagccatgctggcctccaac
atcacccttgagtgctttgctctcggaaatccgatcccccatatcgtttggaggaaagtg
gattcgacggatctcccagcaaaccacgaaattagcgaatcaggagccgtgcttcacctg
tacaacgtgcagtatgaagacgtgggcgggtacgagtgtgaggcgatcaacaccaaaggg
aaggactggcacaaggcctggctctatgtggagtcggctccagagtgggcagagactatc
aacaacacccaggtggacattgggtcggaacatacaatgcgatgtgtggcatcagggaaa
cctttccctttcatccggtggtacaaagacggatacatgtatggtaaaggtgagctcaag
ttctccagtctcaccttcgacgactccggcatgtaccagtgcatcgcggaaaactactgg
ggcatcaaatacgccaacgccgagctccgcgtcatcgcctgtgcaccaacgtttgagttc
aacccggtgaagaagcagctcctcggcgccaaagacgggcgagtgctgatcgagtgcaaa
cccagggcagccccgcgaccccgcttcatctggaagaaaggcgacgagctcctctttaac
agcacacgaatttctgtcatgattgacgggactctggagattcgcaacgccaccaagaac
gatgagggtttgtacacctgcttcgctgagaatgacagagggaaggcaaacaactctggt
tatctcaccatcactgaggctaccagcatcacaatagcacctgaagacagtgaggtgaag
gtgggagatgaggtcatcctcaggtgcagtgcttcattcgaccccatgctggacatcacg
ttcgtctgggctattgacttccgcgtcatcgactttgattctgagtggcaacattatgaa
cgagttatgaaccaagacgggactggcgacctacgaataaaaaatgcccagatttggcat
gaggggcgctacacctgtacagcccaaaccgtggtggacagtgacacagcatatgctgac
ctcaaagttgtaggtgtccccgggcctcctggcgttattcgcgtggaggagattggagac
acgtgggtgaagctgctgtggaccaaaggagcagagcacaacagccccattctctactac
actgttcagacgaggcacttctgggctttgaatgaagacgactggaaaaatgctagtacc
tctccaaccatcctggatggaactatggagagggcagaggtcacagacctgtacccctgg
ctggaataccagttcagaatatttgccaccaacgagtatggatctggagaggccagcatc
ccttccctcaagatcaaaacctgggatgcccctcctgtggtttctcccactgacgtggct
ggatatggaggaaggaacggcgaaatcgtcatcacgtggactcctgtgcagccatggttt
ttctctggcaaaaaatttggctacatcgtggctttcaagccccacgatgcttacgactgg
tggtatgagaccatctccgatccggagacgaggcgatacgctcacaaagacacctacttc
gttccaactgaggaggacttccaggttcgagagttccaagtgaagataaagtctttcaat
gtgaaaggagacggaccctacagcctcaccaaagtcatctactatccaagagatgttcca
acagagtctcccacagacatctatgcccggccagtgtcctccaccgaggctgtggtttgg
tggctgccggtggtggacacaggaacaggcctgcagcagtacgttgaaggataccaggtt
aagtactggaggaagtatgacgacccagaaccaggagccaatcgcatattcgtcccagca
accgccaaccagaccaggctggagaacatgctgccggacgcgcactacctcattgaggtc
cgggccttcaacggggccggcctcgggcctcccggagagcactgcgagatgttcacaaag
agaccaccaccaccagaaccccccaggatgtggcgctacgtcagctggacaggaaagtgg
ttgtatgtgtggtgggaccacatccagtacgactggtttggtaacatctccttccctctg
tactataaggtcatgttcagaaaaacaggctactactacgggaaggtctacatcaccggt
tggcactttatggacttccccatgcctcaggttggagactttgagctgatggtgcgcggc
cgatacgaagggggggatggcccaatcaggaagattcggattaagggtgcagctcccacg
atgacgcccgctctcagcatggtgtcgatggtgctgctggcgctgtgcaccgcgggactt
caaatttag
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integrated database retrieval system