Oryzias melastigma (Indian medaka): 112153394
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Entry
112153394 CDS
T07439
Symbol
cyfip2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04810
Regulation of actin cytoskeleton
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112153394 (cyfip2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112153394 (cyfip2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112153394 (cyfip2)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112153394 (cyfip2)
Factors involved in mRNA localization
Other mRNA localization factors
112153394 (cyfip2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
112153394
NCBI-ProteinID:
XP_024139357
Ensembl:
ENSOMEG00000000713
UniProt:
A0A3B3C0T8
LinkDB
All DBs
Position
LG10:20097692..20119478
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTVCDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVQAIEDFHKQSFFF
THLLNFSEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDH
AISRFESEDLTSIVELEWLLEINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALVSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSFLQDAVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIP
VGTHEFTAEQCFGDGLNWAGCAIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcacgtgaccctggaggatgctctgtccaatgtggacctgctggaggagctg
ccgctgcccgaccagcagccatgcatcgagccgccgccctcctccatcatgtaccaggcc
aactttgacaccaacttcgaagacaggaatgcgtttgtgactggcatcgctcgctacatc
gagcaagccaccgtccactccagcatgaatgagatgctggaagaaggacatgagtacgct
gtgatgctttacacctggaggagctgctccagagccattcctcaggtgaaatgcaacgag
cagcccaacagagtggagatctacgagaaaacggtggaggttctggagcctgaagtgacc
aagctcatgaagttcatgtacttccagaggaaagctatagaacgcttctgcagcgaggtg
aagcgactgtgccacgctgagagaaggaaagatttcgtgtccgaggcgtatctgctcacc
ctgggaaaattcatcaacatgtttgcagtactggatgagctcaagaacatgaagtgcagc
gtgaagaacgaccactctgcctacaaacgagccgctcagttcttgaggaagatggccgac
cctcagtccatccaggaatcccaaaatctttccatgtttttagcaaaccataacaggatc
actcagtgcctgcaccagcagctggaggtgattccaggatatgaagaacttttggccgat
atcgtcaacatctgcgttgactattatgagaacaaaatgtatttgacgccaagtgagaaa
cacatgctgctaaaggttatgggctttggtctgtacctgatggatggaaatgtaagtaat
atctacaaactagatgctaagaagaggatcaacttgagcaagattgacaaattcttcaag
cttcaagtcgtaccactttttggagacatgcagattgagttgtcacgctacattgagaca
agtgctcactacgaggagaacaagtccaagtggacgtgcactcagagcagcatctcaccg
cagtacaacctgtgtgagcagatggtgcagatcagggacgaccacattcgcttcatctca
gaactggcgcgctacagcaacagcgaagtggtgacgggctccgggttggacagccagaag
tcggacgaggagtacagggagctgtttgatctggctctgagggggctgcagctgttgtca
aagtggagcacccacgtcatggaagtgtactcgtggaagttggtacatcccacagataaa
ttctgtaacaaggactgtccaggtacagcagaagagtatgaacgcgccacaaggtacaac
tacaccagtgaggagaagtttgccctggtggaggtcattgctatgattaaaggactgcag
gtgctcatgggtcgcatggagtcggtgttcaatcaggctatcaggaacacaatctatgca
gccctgcaagactttgcccaaatgaccctcagagagccgctgcgccaagcggtgcgcaag
aagaagaatgtcctcattagtgttctccaggcaattcgaaagaccgtctgtgactgggaa
ggagcaagagagcctccgaatgacccctgtctgaggggggagaaggatccaaaaggcggg
tttgacatcaaggtgcctcgtagagctgtgggaccctccagcacacagttgtacatggtc
cgcaccatgctggaatccctgattgcagacaaaagtggatcgaagaagactctgcgcagc
agtctggatggacccatagtgcaggccattgaagacttccataagcagtccttcttcttc
acacacttactcaactttagtgaggctcttcagcagtgctgtgacctatcccagctctgg
ttcagggagttcttcctggagctgaccatgggccgcagaatccagttccccattgaaatg
tccatgccgtggatccttactgaccacattctggagacgaaggagccttccatgatggag
tatgtgctgtatcccttagatttgtacaacgacagtgcctactacgctcttacgaagttt
aaaaagcagttcctctacgatgaaattgaggctgaggtaaacctgtgctttgaccagttt
gtctacaagttggcagatcagatctttgcctattataaagcaatggctggaagtgttctg
ctagacaagcgtttcagggcagagtgtaaaaactacggggtcatcatcccgtatcctcca
tcaaaccgctacgagacgctgctcaagcagagacacgtacagctgctgggtcgctcgatt
gacctgaaccgcctgatcacccagagaatctcggctgcgatgtacaaatccttggatcat
gccattagccgttttgagagtgaagacctcacctccatagtggagttggagtggctcctg
gagatcaacaggctaacccacaggcttctgtccaaacacatgacgctggacagctttgat
gccatgttccgtgaggccaaccacaacgtctctgctccctacggacgaatcacgctccac
gttttctgggaactcaacttcgattttctgccaaactactgctacaacggatcaacgaac
cgcttcgtgcgaaccgctattcccttcacccaggagcctcaaagagacaagccagccaac
gtgcagccttattacttgtacggatccaagcctctgaacattgcctactcccacatatac
agctcctatagaaacttcgtcggcccacctcacttcaagaccatctgccgcctgcttggt
taccaaggcatcgccgttgtgatggaagagctgctcaaaattgtcaagagcctgttacag
ggcaccatactgcaatatgtgaaaactctgatagaagtcatgcccaagatctgccgtcta
ccgcgccacgagtatggttcccccgggatcctggagttctttcatcatcagctcaaggat
atcattgaatacgctgagctgaagacagatgtctttcagagcttaagggaggtgggaaat
gctatcctcttctgcctgctcatcgaacaagctctggtgtcccaggaggaagtgtgcgac
ctgcttcacgctgcccccttccagaatattctgcctagagtctacatcaaagagggagag
cgtttggaggtgaggatgaagaggctggaagcaaagtacgccccgcttcaccttgtgcct
ctaatcgagaggctgggaaccccgcagcaaatagccatcgcgcgagagggcgacctgttg
accaaagagcgcctgtgctgcggcctctccatgttcgaggtcattttgacgcgcatccgc
agcttcctgcaggacgcggtgtggcgtgggcccccgcccaccaacggggtgatgcatgtg
gatgagtgcatggagttccaccgcctgtggagtgccatgcagtttgtctactgcattcct
gtgggcactcacgagttcacagcagaacagtgctttggtgatgggcttaactgggcaggc
tgtgccatcattgttctgctgggacaacagcgacgcttcgatctatttgacttttgctac
catctgctaaaagtccaaaggcaggacggcaaggatgagatcatcaagaatgtacccctg
aagaagatggcagaccgcatcaggaagtaccagatcctcaataatgagattttcgccatc
ctgaacaagtacatgaaggcagtagaaacagacagttccaccgtggagcatgttcgctgt
ttccagcctcctatacaccaatccctggccaccacctgctga
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