Oryzias melastigma (Indian medaka): 112153408
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Entry
112153408 CDS
T07439
Symbol
rbmx
Name
(RefSeq) RNA-binding motif protein, X chromosome isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112153408 (rbmx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112153408 (rbmx)
Spliceosome [BR:
oml03041
]
Common components
Common spliceosomal components
hnRNP proteins
112153408 (rbmx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
RRM_PARP14_3
PHM7_cyt
Nup35_RRM_2
RRM_5
RRM_occluded
DUF7373
Motif
Other DBs
NCBI-GeneID:
112153408
NCBI-ProteinID:
XP_024139380
Ensembl:
ENSOMEG00000016787
UniProt:
A0A3B3DQW6
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All DBs
Position
LG10:10480820..10485901
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AA seq
389 aa
AA seq
DB search
MAEADRPGKLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFENPA
DAKDAAREMNGKSLDGKPIKVEQATKPQFESAGRRGPPPNYSRSRGPPRGPRGSRGGPGG
MRGPPRDYYDSPGSGEPFFKGMSSRGPPPLKRGPPLRNGGPPPKRPAPSGPMGRRESPMS
RDRDPYGPPPRRDSMMSRRDDYPSPRDDHYKDSYSSRDYNSRDSRDYGPPPRDYSYRDYS
SSRDDYGSMSRGYSDRDGYGGGRDPRGYMDRPSGGSYRDSYDGYGNSRSAPPSRGPPPSY
GGSSGSSRYDDYGGSSRDGYGSRDSYPSSRSDQYPPNRGERMGRQDRGPAPPGDRGYPPR
DSYGSSSRGGPRGGRGGSRVDRGLARSRY
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcagaccggccaggaaagcttttcatcggagggttgaacactgagaccacc
gagaaggccttggagcaatacttcagcaaatatggcagaattgttgaagttattttgatg
aaagatcgcgaaacaaacaagtcaagaggatttgcatttgttaccttcgaaaatcctgct
gatgccaaggatgcagctcgtgagatgaatggaaagtctcttgatggcaagccaatcaaa
gtggagcaggctacaaagcctcagtttgagagtgctggtagacgcggacccccacccaat
tactctcgcagtcgtggtccaccaagaggtcctcgtggttccaggggtggtcctggtggc
atgaggggaccccccagggactactatgacagtcccggaagtggggaacccttcttcaaa
gggatgtcatcaaggggcccccctccactgaaacgaggccctccacttcgtaatggcggc
ccaccacccaagagacctgcaccgtctggccccatgggcagacgtgagtctcctatgtca
agggacagagatccctatggtcctccaccccgaagagactccatgatgtccaggagggac
gattatccgtcaccgagggatgaccactacaaagacagctattccagtcgggattataat
tcaagagactcgagggactacggacctcctccaagagactactcctacagagattactct
agttcccgggatgattacggctccatgtccagaggatacagtgaccgtgatggttatgga
ggtggacgagatccaagaggctacatggatcgtcccagcgggggttcctacagagattca
tacgatggttacggtaactctcgcagtgcccctccctcaaggggccccccaccatcctat
ggtggaagcagtggaagcagtcgttatgatgactatggcggcagctctcgggacggctat
ggaagtcgagacagttatcccagcagtcggagtgaccagtatccccctaaccgtggcgag
cggatgggaaggcaggataggggccccgccccccctggggatagaggctacccccctcgt
gactcgtatggcagttcaagccgtggagggccacgtggaggccgtggtggcagtcgagtt
gacaggggattggctcgcagcagatactaa
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