Oryzias melastigma (Indian medaka): 112153426
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Entry
112153426 CDS
T07439
Symbol
frmpd3
Name
(RefSeq) FERM and PDZ domain-containing protein 3 isoform X1
KO
K23959
FERM and PDZ domain-containing protein 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112153426 (frmpd3)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Other domain-containing proteins
FERM domain-containing proteins
112153426 (frmpd3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
RA_2
PDZ
FERM_C_FAK1
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
112153426
NCBI-ProteinID:
XP_024139407
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All DBs
Position
LG10:17132833..17232689
Genome browser
AA seq
1727 aa
AA seq
DB search
MAKVQDGHTNGCDSTAMLEESQDGMDCGTLSPASARQVTIQRHPTQGFGFIAGSQRPVIV
RSVFADGPSFGKLLPGDQILAINEETVSDAPRERVIDLVRHCKDTIVLTVLQPHQSPKSA
FISAAKKARLRTNPPKVRFSEQVSISDPDSTMLKDDSLLLIPNVLKVFLENGQIKSFTFD
SRTTVRDVISSLQDRLSLRYIEHFALVLEAGGLDQNQKLNLLQENQPLTHVVHRTYFQGM
KCLFRICYFPKDPADLLRRDPAAFEYLYIQSRNDVIKERFGMDWKSDVTLRLAALHIYIT
VSSARPNQKISLKHVEKEWGLEPFLPLTLLPTVKEKNVCKTLSQLLKTYQHPPPSGNKVP
PLQGKLQYMRVLNDLPPFGGILFHTVGLDEKQPATTLLVGPRHGISHVIDLKNNLTTVLA
EFCRVSKIQLYRESQGVARVEVTIHEAKPLVLLMEWPDASNFACLISGYYKLFVDPKRTI
YFRNPGQSQLTKADYRSSHHPHPRSVASGLQSGGRRGDEREVSHRESGCSRPTVPAESQH
LGLCHVHLREQQQFQEIQTQPDTELDINENFISPEPPGRPRTKSDPTQESTEETAVVLEC
PVVENKEFRTRAQTMNQSQKATRYFCDSCKAKLRAEGLSNAVKSGSSGKHCSSACASRDA
GAVDLTALPPPGNEEEEEEVDGGGAKLQPPPPAIAAPPPGFRDNSSDEEDPKRGRKARSS
ASVGLASGKPVHANEDVPVTLIDNVATRTVRDHAQELDDALVSTLQALEALAASEDYPHH
SQQPTQTAGLIVLAAITPESSLDSGHETNSSELTDVSEMVSAMKQNQNQAYLLAHHINKE
RILCRRDFPLAIPGCTAKTIGTGAFSVGQIRAGCPPKQVILSKTVPFKVSPSQDSAILSV
LADQGGNPSMTQTEQKAELKAISESDNANAAEHSSKPAEEVKVCDSLLTAQVSAEQKLPI
SHRETLSEYPPNGTKEKTDASFDKDPISKALPIILPVNRTASAKISPTNMCQDAKTASSE
TMKPSSSTELLPVDDLFCTCPVKQEPAPQTRLKDPQVQKIVVFQSSSPTDDERLRAKGLR
LANRENTARVGTDSSITKPSPQMQTKFSPHLPVKAERKEAEDSKTEAAQGKPKQELQKCP
IKSLPILDDLTTPNPSVDKVSTLPARDSKKHSSVKGKSQRSAPFLSFRNLISATFPARMR
RETDERRAQLQKVRQYELEFLEELLKPKSSQGEFLPQGSSPVPSGTPCACQLRTSPVLKA
PGISREQRRSCDCKRMCRGMRLPDTPVGTTTEAQNRGRERTVSKTPPAVSKTSHAQGATG
KAQTLEIKTTRIRSTSLESREPRGDQGSCLSTCTSHTDCKAAPQNKKLQRRYSIGELDNS
TSTPVYAEVKPKGKSLEKEMERVRATGMRLPTPVEPIHTQSHQAEGKGKKTVFFIQGEEL
VCEGKEGKVSTGEVLLSLPSEDSDDKDKCCSFCFCYRKCEAADESSEKDELSYSIPLQIL
PGMDVDSRTFPVVSKTLQVLNAEDCSGEEEEVEEEEPQTQDIDLRSCGTLEGSLARVKAL
QGKTFSLPDGFLNAQLDANELLAILRQCANSPQAEGEARLQSSRIAEYKQELAVRFKEFR
ASCRRVASVEKSPTRMLAAVSASFQVLCELTQTFIKLVRGVRSEAQRLQLLRKVEEVAIN
YTLLLRAAEESMGHSSSLPTKTMSPEVPSNTNNMSSLTRPIKTLPAQ
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggtccaggatggacacacaaatggatgtgacagcactgccatgttagaggag
agccaggatggtatggactgtggaaccctaagtcctgcctcagctcgacaggtcactatc
caacggcacccaactcaaggctttggcttcatcgcaggcagccagaggcctgtcattgtg
cgctccgtctttgctgacggcccgtcttttggcaaacttctccccggagaccagatcttg
gccattaacgaagagacggtgagcgacgcgccacgagagagagtcatagaccttgtaaga
cactgtaaagacactatagttctcactgtgctgcagccccatcagtcacccaagtctgcc
ttcataagtgcagccaaaaaagcccgcctgcgaaccaacccgcctaaagtgcgcttttca
gagcaagtgtccatcagcgacccagactcaacgatgctcaaggacgactccttgctactt
ataccaaatgtgctgaaggtgttcttggagaatgggcagattaaatcttttacttttgac
agccgcaccactgtaagggatgtgatctcatccttgcaagaccgcctctcgctgcgctac
attgagcacttcgccttggtgctggaggcaggcggtctagaccagaatcagaagctgaat
ctactgcaggagaaccagccactgacacatgtggttcacagaacttatttccaaggaatg
aaatgcctgttccgcatatgctacttccccaaggaccccgcagacttgttaaggagagac
cctgctgcattcgagtacctttatatacagagtcgcaatgatgtcatcaaagagcgcttc
gggatggactggaaatccgacgtcacgttacgactcgccgcgctccacatttacatcaca
gtgtcttccgcgaggcccaatcagaagatttccctcaagcacgttgaaaaggaatgggga
ctcgaacctttccttccactgactctgctccccacagtgaaggagaagaacgtgtgcaaa
accctgtctcagctgctgaagacttaccaacacccgccaccatcaggcaacaaggtccct
ccactccaaggaaagctgcagtacatgcgagtactcaacgacctcccgccatttggtgga
attctgtttcacaccgttggactggatgagaaacagccagcgacgacactactggtgggg
cctcgacatggcatcagccatgtgattgacctgaaaaataacctgactacagttctggct
gagttctgcagggtttccaaaatccagctctatcgggaaagtcaaggagtggcccgagtg
gaagtgacaattcacgaggcaaagcctctggtcctgttaatggaatggcctgatgccagc
aactttgcatgcctcatctctggctactacaagctgtttgtggaccctaaacgcaccatt
tactttaggaaccccggtcagtcacagctgaccaaggcagattacagaagctcccaccat
ccccacccgcgctctgttgcatctggattacaaagtggagggcggcgaggagacgagagg
gaagtttcacacagggaatcagggtgctcaagacctacggtacctgcggagtcccagcat
ctcggactgtgtcatgtccaccttcgagagcagcaacagtttcaggagatccaaacgcag
cctgatacagagttggacatcaatgagaactttatttccccagaaccccccgggcggcct
cgtaccaagtccgatcccacgcaggagagcacagaagaaacagctgtggttttagagtgt
ccagtagtggagaacaaggagtttcgaaccagagctcaaacgatgaatcagtcccaaaaa
gctacaagatacttctgtgactcctgcaaagccaagctgagggcagagggcctgtctaat
gcagtaaaaagcggcagttcggggaagcattgctccagtgcttgtgcttcccgagatgca
ggtgctgttgatctcacagcccttccaccccctgggaatgaagaagaggaggaggaggta
gatggaggaggagcaaagctccaaccaccaccacccgctattgctgctccaccgcctggc
tttagggataacagctctgacgaggaggatccaaagagggggaggaaagctcggtccagc
gccagcgttggacttgcctctgggaaacctgtccatgccaatgaagacgttcctgtgaca
ctgattgataacgttgcaacaagaacagtccgagatcatgcccaggagcttgacgatgct
ctggtttccaccctacaggcccttgaagctttggcagcctctgaagactacccgcatcac
tctcagcaaccaacacagactgcagggttgattgtcttagcggccattactcctgagtca
tcactggattcaggtcatgagaccaactcctctgaattgacagatgtttctgagatggtg
tcagcaatgaagcaaaaccagaatcaagcctacttgctggctcatcacatcaacaaggaa
cgtattctttgtcgccgggactttcctctggccattcctggctgcacagcaaagaccatc
gggactggggccttttctgtgggtcagattcgagctggctgtccgcccaagcaagtaatc
cttagcaagactgttccctttaaagttagtcccagtcaagattcagcaatactcagtgtt
ttggcagatcagggcggcaatccaagtatgactcagactgaacaaaaagcagagttgaaa
gctatttctgagtctgacaacgcaaacgcagctgagcactcttccaaaccagccgaggaa
gttaaagtgtgtgatagtttgctgacagctcaagtcagtgctgaacaaaagctacccatt
tctcatagagaaacattaagtgaatatccccccaatggtacaaaagaaaaaacagacgca
tcttttgataaagaccccataagcaaagccttaccgatcatcttgcctgtgaacagaact
gcctctgccaagatttctcccactaatatgtgccaagatgccaagactgcctccagtgag
accatgaagccttcaagctctacagaactcctgccagttgatgatcttttttgcacgtgt
ccagtgaagcaagagcctgcacctcaaacaaggctaaaggacccacaggttcagaagata
gtggtgtttcaatcctcctccccaactgatgatgaacgtcttagagcaaaaggacttcga
ttggccaatagggagaacactgctagggtaggcactgattctagcataacaaaaccaagc
ccacaaatgcaaaccaagttctcccctcatttacctgtaaaagcagaaagaaaggaagca
gaggacagcaaaactgaggcggcccaggggaaacccaaacaggagctgcagaaatgccct
ataaaatccttgcctattttagatgatctaacaaccccaaacccatctgtagacaaagtc
tccactctcccagctagagactcaaagaagcacagcagtgtcaaagggaagtctcagcgc
agtgcccctttcttaagctttagaaatcttatttccgcaacatttccagcaagaatgaga
agagagacagatgaacgaagggcccagctgcagaaagtccgtcagtacgagttagagttc
ttagaagagctgctgaagcccaaatcatcacaaggagaatttctaccacaagggtcctct
cctgttccctctgggaccccttgtgcctgccagctgcgcaccagtccagttctcaaggct
ccagggatctcgagggagcagcgacgcagttgcgactgtaagcgaatgtgcagggggatg
cgactacctgacacaccggtcggcaccacaacagaggcacaaaacagaggcagggagaga
acagtctcaaagactcctccagcagtttccaaaacctctcatgctcaaggcgccacaggg
aaagctcagactttagagatcaagaccacaagaatacggtcaacaagtcttgagtcaaga
gaacccaggggggatcagggttcctgcttgtccacctgtacttctcacactgattgcaag
gcagctccacagaacaagaagctccagaggagatacagcatcggagagctggataacagc
actagcacaccagtgtatgctgaggtgaagccaaaaggcaaaagtctagagaaagaaatg
gagagagtgagggccacagggatgagactccccactccagtagagccaatccacactcag
tctcaccaggcggaggggaaagggaaaaaaactgtgtttttcattcagggagaggagctg
gtgtgtgaaggcaaagaaggcaaagtatcgactggggaggtgttgctgtcactgcccagt
gaagacagtgacgacaaagacaaatgctgctcgttctgtttctgctacagaaagtgtgag
gcagcagatgaaagcagtgagaaagatgaactctcttattccataccgcttcaaatcctc
ccgggcatggatgtggattcacgcacctttcctgttgtgagcaaaacactccaggttctc
aatgctgaagactgcagtggagaagaggaagaagtcgaagaggaagaaccccagacgcaa
gacattgacctgcgatcctgtggaacgcttgagggaagcctagcacgggtgaaggccctg
caagggaaaactttcagcttgccggatggtttcctaaatgcccagcttgatgccaatgag
ttgctagctatcctacgacagtgtgccaacagcccacaagcagagggcgaggctcgtctt
cagtcttcacggatcgcagagtacaaacaggagctggcggtgcgcttcaaagaattccga
gcctcatgtcggagggtggcaagcgtggaaaaaagccccactcgaatgcttgccgcggtc
tcagccagctttcaggtgctgtgtgaactaactcagaccttcatcaaattggtccgaggg
gttcgttcagaagcccaaaggctccagctgttgaggaaagttgaggaggtagctataaat
tacacattgcttctgcgcgccgcagaggagtccatgggacactcgagcagcttgccaaca
aagacaatgagccctgaagtcccctctaacaccaacaacatgagctcactcacacggccc
atcaaaactctacctgctcaataa
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integrated database retrieval system
