Oryzias melastigma (Indian medaka): 112153437
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Entry
112153437 CDS
T07439
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112153437 (rlim)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112153437 (rlim)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112153437 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
112153437
NCBI-ProteinID:
XP_024139422
Ensembl:
ENSOMEG00000007604
LinkDB
All DBs
Position
LG10:17008017..17014975
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AA seq
651 aa
AA seq
DB search
MEGSDGVEQGGSDQPESQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGNPGEVT
EDELISRLQQIKGGPEQQSNNPPPESNEEPVEQPESSEDPPGGESLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEAEQEPPEQSAEGQEVSA
EPEAQVPMEAEVVEEPVVEELAVLVEPEPEVDAVVSHQIIEEPISPPTPPPPPPPPVQPP
PCSSPRRGQRRARSRSPEPRRTRARLARSRSPLSLDQLDGIPIPRHDYSSQSSSSSSNTP
SVPPVEGSSRTRQHVLSRQNFADGDVWPPRAAAESVPESPNVGSQEGETAGGDGGETGEG
GAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSR
SERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDS
NRAASTPADLETLNNPDVNNTDSADADEQPVAAGLRGRTVEADADEGLTAGQPASGVRPR
PRPPISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVC
ITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacggtgttgaacagggtggcagcgaccagcctgagtcacagcgcagg
aggcagctggatcgcctggacagagaggaggccttctaccagtttgtcaacaacctcagt
gaggaagactatcggctgatgagagacaacaatcttttgggcaatccaggagaagtcaca
gaggatgagctgattagtcggcttcagcagatcaaaggtggtccggagcagcagagtaac
aaccctcctcctgagagtaatgaagaaccagttgaacaaccagaaagctctgaggatcct
cctggtggagaaagccttcttgactggctgaacacagtccgacgcacaggcaacacaacc
agaaccggtcaccgtgggaaccagtcatggagagctgtgagccagaccaatccaaacagt
ggcgattttcgttttagcctggaaattagtgtgaaccgtaatctggctgagcagcaggcg
gctgctgaagcggagcaagagcccccagaacagtctgcggaaggtcaagaggtgtccgcc
gaacctgaagcacaggttcccatggaagcagaagtggtggaagaaccagttgttgaggaa
ttagccgtccttgtggagccagagccggaagtggatgcagtagtttcacatcagattata
gaggagcctatcagtccaccaacaccgccgccgccaccacctcctccagttcaaccccct
ccttgttcttctccacgtagaggacagagaagagcccgcagccgcagcccagaaccacgc
agaactcgtgcccgccttgccagaagccggtcccctctcagcttggatcaacttgatggc
attcctatcccgagacatgattacagttctcaaagttctagttcttcctcaaatactccc
tctgtgcctccagttgagggtagttctcggactcgacagcatgttctttcccggcagaac
tttgccgatggggacgtttggccacccagagctgccgctgaatccgtcccggagtcccca
aatgttggatctcaggaaggagaaactgctgggggtgatggcggcgaaacaggtgaaggt
ggcgcagcagggcggcgtcctcccaccataatgctggatctgcaggtgcgtcgcgtgcgc
ccgggcgagtatcgtcaaagggacagcatcgccagccgcacccgctcacgctcgcagaac
tccaacaacacgtttctttacgagagcgagcgcggcgggtttcgcaggactttctcgcgc
tcggagcgcgccggcgtgaggacgtatgtcagcaccattcgaatccccatccggagaatc
tctgacgcaggtttgggagaagcaacctcaatggctcttcagtctatgattcggcagatc
atgacgggcttcggcgagctcggctacctcatggattcagactctgactcctcagattct
aaccgtgctgccagcacgcctgcagacttggaaaccctcaataatccagatgtgaataac
actgactctgctgatgcggacgaacagccggttgctgctggacttagaggaaggacagtg
gaggccgatgcggacgagggcctcactgccggtcaaccggcatccggcgtccggcctcga
ccacggccacccatcagcttagaggagcccagttccctgcccttcctgcgacttgctcac
ttctttctattgaatgacgacgatgaggaccagcctcaggggctgaccaaagaacagatc
gacaacctttctatgcgcaacttcggggagagcgacgctttgaagacctgtagtgtctgc
atcacggaatacgcagagggcaacaagctgcgcaagctcccttgttctcatgaatatcac
gtgcactgcatagatcgctggctctctgagaactccacctgccccatctgccgccgggcc
gtcctggtgtcagccaaccgagaaagtgtggtgtaa
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