KEGG   Oryzias melastigma (Indian medaka): 112153437
Entry
112153437         CDS       T07439                                 
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112153437 (rlim)
Enzymes [BR:oml01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112153437 (rlim)
Ubiquitin system [BR:oml04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112153437 (rlim)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING_16 zf-RING_4
Other DBs
NCBI-GeneID: 112153437
NCBI-ProteinID: XP_024139422
Ensembl: ENSOMEG00000007604
LinkDB
Position
LG10:17008017..17014975
AA seq 651 aa
MEGSDGVEQGGSDQPESQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGNPGEVT
EDELISRLQQIKGGPEQQSNNPPPESNEEPVEQPESSEDPPGGESLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEAEQEPPEQSAEGQEVSA
EPEAQVPMEAEVVEEPVVEELAVLVEPEPEVDAVVSHQIIEEPISPPTPPPPPPPPVQPP
PCSSPRRGQRRARSRSPEPRRTRARLARSRSPLSLDQLDGIPIPRHDYSSQSSSSSSNTP
SVPPVEGSSRTRQHVLSRQNFADGDVWPPRAAAESVPESPNVGSQEGETAGGDGGETGEG
GAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSR
SERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDS
NRAASTPADLETLNNPDVNNTDSADADEQPVAAGLRGRTVEADADEGLTAGQPASGVRPR
PRPPISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVC
ITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq 1956 nt   +upstreamnt  +downstreamnt
atggaagggtctgacggtgttgaacagggtggcagcgaccagcctgagtcacagcgcagg
aggcagctggatcgcctggacagagaggaggccttctaccagtttgtcaacaacctcagt
gaggaagactatcggctgatgagagacaacaatcttttgggcaatccaggagaagtcaca
gaggatgagctgattagtcggcttcagcagatcaaaggtggtccggagcagcagagtaac
aaccctcctcctgagagtaatgaagaaccagttgaacaaccagaaagctctgaggatcct
cctggtggagaaagccttcttgactggctgaacacagtccgacgcacaggcaacacaacc
agaaccggtcaccgtgggaaccagtcatggagagctgtgagccagaccaatccaaacagt
ggcgattttcgttttagcctggaaattagtgtgaaccgtaatctggctgagcagcaggcg
gctgctgaagcggagcaagagcccccagaacagtctgcggaaggtcaagaggtgtccgcc
gaacctgaagcacaggttcccatggaagcagaagtggtggaagaaccagttgttgaggaa
ttagccgtccttgtggagccagagccggaagtggatgcagtagtttcacatcagattata
gaggagcctatcagtccaccaacaccgccgccgccaccacctcctccagttcaaccccct
ccttgttcttctccacgtagaggacagagaagagcccgcagccgcagcccagaaccacgc
agaactcgtgcccgccttgccagaagccggtcccctctcagcttggatcaacttgatggc
attcctatcccgagacatgattacagttctcaaagttctagttcttcctcaaatactccc
tctgtgcctccagttgagggtagttctcggactcgacagcatgttctttcccggcagaac
tttgccgatggggacgtttggccacccagagctgccgctgaatccgtcccggagtcccca
aatgttggatctcaggaaggagaaactgctgggggtgatggcggcgaaacaggtgaaggt
ggcgcagcagggcggcgtcctcccaccataatgctggatctgcaggtgcgtcgcgtgcgc
ccgggcgagtatcgtcaaagggacagcatcgccagccgcacccgctcacgctcgcagaac
tccaacaacacgtttctttacgagagcgagcgcggcgggtttcgcaggactttctcgcgc
tcggagcgcgccggcgtgaggacgtatgtcagcaccattcgaatccccatccggagaatc
tctgacgcaggtttgggagaagcaacctcaatggctcttcagtctatgattcggcagatc
atgacgggcttcggcgagctcggctacctcatggattcagactctgactcctcagattct
aaccgtgctgccagcacgcctgcagacttggaaaccctcaataatccagatgtgaataac
actgactctgctgatgcggacgaacagccggttgctgctggacttagaggaaggacagtg
gaggccgatgcggacgagggcctcactgccggtcaaccggcatccggcgtccggcctcga
ccacggccacccatcagcttagaggagcccagttccctgcccttcctgcgacttgctcac
ttctttctattgaatgacgacgatgaggaccagcctcaggggctgaccaaagaacagatc
gacaacctttctatgcgcaacttcggggagagcgacgctttgaagacctgtagtgtctgc
atcacggaatacgcagagggcaacaagctgcgcaagctcccttgttctcatgaatatcac
gtgcactgcatagatcgctggctctctgagaactccacctgccccatctgccgccgggcc
gtcctggtgtcagccaaccgagaaagtgtggtgtaa

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