Oryzias melastigma (Indian medaka): 112153473
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Entry
112153473 CDS
T07439
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112153473 (lingo2)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112153473 (lingo2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
Ig_2
V-set
LRR_9
LRR_EndoS
Ig_6
C2-set_2
LRR_Zer-1
Sp38
Ig_5
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
112153473
NCBI-ProteinID:
XP_024139489
Ensembl:
ENSOMEG00000011496
LinkDB
All DBs
Position
LG10:1838403..2141251
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AA seq
613 aa
AA seq
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MVDCMSKAMPHTVVSCWQPFLGLALVAVFVSSTLGCPSRCECSAQSKAVVCHRKRMPTIP
DGIPTETRVLDLSKNKLTMINPDDFIAFPGLEELDLSGNLISYVEPGAFNALFNMHSLSL
KSNRIKLIPLGVFTALTNLTRLDISDNKIVILLDYMFQDLHNLKFLEVGDNDLVYISHRA
FSGLLSLETLTLERCNLTVVPTEALSHLHSVVSLHLRYLSISTLHPYSFKKLFKLRHLEI
DNWPSLDHVPANALHGLNLTTLFITNTNLSSFPYQALKHLYYLTHLNLSYNRIKHIEGGM
LMELIRLQELHLVGAQLNVIEPYAFQGLRNLKVLNVSHNHLDTLEKGVFQSPETLKVLLI
DNNPLVCDCRLMWILQKRQSLFFGDSQPECSNPESSRGQPFKEFKETLLSYYVTCTKPKI
RENKTQTVTVDEGQQAMLRCSAEGTPRPSVSWLSPRRRVLTNRNHGRVMVHNNGTLEIKS
AEMQDSGVYLCLASNSAGNDTLMTSLAVKSLGSLYANRTQYYTDPNNTTANGTTSVTLGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDVEYVPRSKSNGTNVDSDE
GQAGPRRFNMKMM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtggactgtatgagcaaagccatgccgcacacggtcgtctcatgctggcagccattc
ctgggactggcccttgtggccgtctttgtgagctctaccttgggatgtccctcccgctgt
gagtgttcagcacagagcaaagcagttgtgtgtcaccgcaagcgcatgcccactataccg
gatggcattccaaccgagaccagagtcctggacctgagcaaaaacaaactgacaatgatc
aacccagatgactttattgcatttcctgggcttgaggagttggacctaagtggaaatctt
atcagctatgttgagcctggagcttttaatgccctatttaacatgcactcactcagcctt
aagagcaatcgtatcaagctcattcctttgggcgtcttcacagctctaacaaatcttacc
cgactggatataagtgataacaagatagtaatcctgctggactatatgtttcaggatttg
cataacctaaagtttctggaagtgggtgacaacgacctggtttatatttctcaccgtgca
ttcagtggacttttaagcctggagacactcaccctggaaaggtgcaacctgaccgttgtt
cccactgaggccctctcccacttgcacagtgtggtcagcctccatttacgttacctcagc
attagcactttgcatccatactcattcaaaaagttgttcaagctgaggcacttagaaatt
gacaactggccctctcttgaccatgttccagctaatgctttgcacggtctgaacctgaca
acactctttataaccaacaccaacttgtcatctttcccctatcaagctcttaagcatctg
tactacctgacacacctgaacttgtcttacaaccgcattaagcacattgaaggaggcatg
ctgatggagctaatccgcctgcaagagttgcatttggttggtgctcaattgaacgtcatt
gagccatacgctttccaaggcctacgaaatctaaaagtcctcaacgtctctcacaaccac
ctggatactttagaaaagggagtgtttcagtctccggaaactctgaaagttcttctgatt
gacaacaatccgctggtgtgcgattgtcgtctcatgtggatcttacaaaaaaggcaatct
ctattttttggggattcgcagccagaatgcagcaacccagagagtagtcgtggacagcct
ttcaaggaatttaaagaaacccttctgtcgtattatgtgacctgcaccaagccaaaaatt
cgagagaacaaaacccaaacagttactgtggatgagggccaacaggcaatgttgagatgc
agtgctgaaggaacgcccaggccgagtgtgtcttggttgtccccacgtcgacgagtgttg
acaaatcgtaaccacggaagagtgatggtccacaacaatggcacacttgaaataaaatca
gcagaaatgcaagatagtggagtttacctgtgtctggcctccaacagtgctggaaacgac
accctgatgacatccctggcagtcaagagcctgggatccctgtatgccaacaggacccag
tactacacagatcccaacaacacaactgccaacggaacaaccagtgtgaccctcggtttg
gatcttaagactatcttagtgtcgacagctatggggtgtttcactttcttgggcgtggtt
ttgttttgcttcctgcttctttttgtttggagcagagggaagggaaaacataaaaacaac
atagatgttgagtatgtgcctcgatcaaagtccaatggcacaaatgttgattcagatgag
ggacaagccggtcctcgccgttttaacatgaaaatgatgtga
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