Oryzias melastigma (Indian medaka): 112153525
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Entry
112153525 CDS
T07439
Symbol
stx5a
Name
(RefSeq) syntaxin-5a isoform X1
KO
K08490
syntaxin 5
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112153525 (stx5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112153525 (stx5a)
Membrane trafficking [BR:
oml04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
112153525 (stx5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
BOS1_GOSR2_MEM11-like_N
Apolipoprotein
ATG17_like
SEO_N
HrpB7
Syntaxin
DUF16
ABC-2_memb_rel
DUF2207_C
DUF3130
MCPsignal
DUF6746
Prominin
Motif
Other DBs
NCBI-GeneID:
112153525
NCBI-ProteinID:
XP_024139585
Ensembl:
ENSOMEG00000018210
UniProt:
A0A3B3CGV1
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All DBs
Position
LG10:11295625..11300607
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AA seq
329 aa
AA seq
DB search
MTCRDRTLEFQSACKSLQGRQNGAQPSKPALLALRQRSDFTVMAKRIGKDLSNTFAKLEK
LTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRGAPGGRHIQSHSNT
IVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSQPPVSSSPMMANNFRSRKKGAQ
EPHADREPRYDYQGYTTTNLKESSVLMQDESRSLGDVAINMESQSNPLQLQLIDEQDSYI
QSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDANVEDTQLNVEAAHTEILKYF
QSVSSNRWLMIKIFLVLVVFFIIFVVFFA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgccgtgatcggactctggagttccagtccgcctgtaaatctctgcagggaaga
caaaatggagcccagccgagtaaaccagctcttctcgctctcaggcagcgcagcgacttc
acagtcatggcaaagagaattgggaaagacttgagcaacacatttgccaaactggagaag
ctcactattttggcaaaaaggaaatccctatttgatgacaaagcagtggagattgaggag
ctgacgtacatcattaaacaagacataaacagtctaaacaaacagatagcacagctacag
gacttggtgagatcgcgtggagctccgggtggccgacacatccagtctcattctaacact
atagtggtgtcactacagtccaaactggcttccatgtcaaatgatttcaagtcggttctt
gaggtcagaacagagaacctgaagcagcagcgcagcaggagagaacagttctcccagcct
cccgtctcgtcttctcccatgatggcaaacaacttcaggagccgcaaaaaaggggcccag
gagccgcacgcagatcgtgaaccgcgctatgactaccagggctatacaaccacaaattta
aaagagagttcggtcctgatgcaggatgagtcgcgcagtttgggagacgtggccataaat
atggagtctcagagcaaccctctgcagctccagctcattgatgaacaggattcgtacatc
cagagccgtgcagacaccatgcagaacattgagagcaccattgtggagctgggttctata
ttccagcagctggcacacatggtcaaggagcaagaggagaccatccagagaatcgatgcc
aacgtcgaggacacccaactgaacgtggaggctgcacacacggaaatcctcaaatatttc
cagtcggtctcttctaatcggtggctgatgatcaaaatcttccttgttctcgtcgtcttc
ttcatcatctttgtggtgttcttcgcctga
DBGET
integrated database retrieval system