KEGG   Oryzias melastigma (Indian medaka): 112153525
Entry
112153525         CDS       T07439                                 
Symbol
stx5a
Name
(RefSeq) syntaxin-5a isoform X1
  KO
K08490  syntaxin 5
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    112153525 (stx5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112153525 (stx5a)
Membrane trafficking [BR:oml04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    112153525 (stx5a)
SSDB
Motif
Pfam: SNARE Syntaxin-5_N BOS1_GOSR2_MEM11-like_N Apolipoprotein ATG17_like SEO_N HrpB7 Syntaxin DUF16 ABC-2_memb_rel DUF2207_C DUF3130 MCPsignal DUF6746 Prominin
Other DBs
NCBI-GeneID: 112153525
NCBI-ProteinID: XP_024139585
Ensembl: ENSOMEG00000018210
UniProt: A0A3B3CGV1
LinkDB
Position
LG10:11295625..11300607
AA seq 329 aa
MTCRDRTLEFQSACKSLQGRQNGAQPSKPALLALRQRSDFTVMAKRIGKDLSNTFAKLEK
LTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRGAPGGRHIQSHSNT
IVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSQPPVSSSPMMANNFRSRKKGAQ
EPHADREPRYDYQGYTTTNLKESSVLMQDESRSLGDVAINMESQSNPLQLQLIDEQDSYI
QSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDANVEDTQLNVEAAHTEILKYF
QSVSSNRWLMIKIFLVLVVFFIIFVVFFA
NT seq 990 nt   +upstreamnt  +downstreamnt
atgacgtgccgtgatcggactctggagttccagtccgcctgtaaatctctgcagggaaga
caaaatggagcccagccgagtaaaccagctcttctcgctctcaggcagcgcagcgacttc
acagtcatggcaaagagaattgggaaagacttgagcaacacatttgccaaactggagaag
ctcactattttggcaaaaaggaaatccctatttgatgacaaagcagtggagattgaggag
ctgacgtacatcattaaacaagacataaacagtctaaacaaacagatagcacagctacag
gacttggtgagatcgcgtggagctccgggtggccgacacatccagtctcattctaacact
atagtggtgtcactacagtccaaactggcttccatgtcaaatgatttcaagtcggttctt
gaggtcagaacagagaacctgaagcagcagcgcagcaggagagaacagttctcccagcct
cccgtctcgtcttctcccatgatggcaaacaacttcaggagccgcaaaaaaggggcccag
gagccgcacgcagatcgtgaaccgcgctatgactaccagggctatacaaccacaaattta
aaagagagttcggtcctgatgcaggatgagtcgcgcagtttgggagacgtggccataaat
atggagtctcagagcaaccctctgcagctccagctcattgatgaacaggattcgtacatc
cagagccgtgcagacaccatgcagaacattgagagcaccattgtggagctgggttctata
ttccagcagctggcacacatggtcaaggagcaagaggagaccatccagagaatcgatgcc
aacgtcgaggacacccaactgaacgtggaggctgcacacacggaaatcctcaaatatttc
cagtcggtctcttctaatcggtggctgatgatcaaaatcttccttgttctcgtcgtcttc
ttcatcatctttgtggtgttcttcgcctga

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