Oryzias melastigma (Indian medaka): 112153537
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Entry
112153537 CDS
T07439
Symbol
gabrp
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112153537 (gabrp)
04082 Neuroactive ligand signaling
112153537 (gabrp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112153537 (gabrp)
Ion channels [BR:
oml04040
]
Ligand-gated channels
GABA-A
112153537 (gabrp)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112153537
NCBI-ProteinID:
XP_024139608
Ensembl:
ENSOMEG00000012177
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All DBs
Position
LG10:complement(19775968..19784100)
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AA seq
450 aa
AA seq
DB search
MSAQLHQVLLLCLTITKGWCMFPNNHWGEWNDSQLLPTIQKLMKGYNRYLRPNFNEGPVE
IGMSLDIASIDAISEINMDYTATIFLRQRWRDSRLVFPGNESVSVDGRLVSLLWIPDTFI
PDSKRSFLHDVTVENRLIRIFSNGTVLYALRITATIACNMDLTKYPMDKQECTLQLESWG
YNIQDVVFYWTRGNDSVKGLDTLRLAQYSVESYYTSVSEAVYETGHYPKLVLHFALRRNV
LFFILETYVPSILLVVLSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFTFIFGALLEYACAHFYTMQHQTLEDLHRELLREFCEWNGNGSIPIVGP
SQPNQSAEIGSTAEEATEQSVNSDIKNPPAAKEKVQSRGCGLSSVKDASRRAASVFIVEN
PHNIDSHARTVFPTAFLVVNILYWLYYLFL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccagcttcaccaggttcttctcctctgtctgaccatcacaaaaggatggtgc
atgttccccaacaaccattggggtgaatggaatgactctcagcttctaccgacaattcag
aagcttatgaagggatacaatcgatacctccggcctaattttaatgagggtcccgtggaa
attggaatgagcctcgacattgccagcatcgacgccatttctgaaatcaatatggactac
acggcaactatcttcctccgtcagcgctggagggattccaggttggtgtttcccgggaat
gagagtgtgagcgtcgacgggcgtctggtgtccctgctctggatccctgacaccttcatc
ccagactccaagcgctccttcctgcatgacgtcactgtggaaaaccgcctcattcggatc
tttagcaatggaacagtcctctatgccttgcgtatcactgctactattgcctgtaacatg
gatctgaccaaatatcccatggacaaacaggagtgcacgctgcagctggagagctggggc
tataacatacaggatgttgtgttctactggaccagagggaatgattcagtgaagggtttg
gacacgctgcggctggctcagtacagcgtcgagagctactatacatcagtgtcagaggcc
gtgtacgagacaggacattaccccaagctggtcctgcattttgcactgcgtcgaaacgtc
ttgttcttcatcctggagacgtatgttccctccattctgctggtggttctgtcctgggtc
tctttctggatcagccagtcctctgtaccggctcggacctgcattggagtgacaacagtc
ctgacgatgactactctgatgatgggcgcccgcacctccctgcccaacgccaactgcttc
ataaaggccatagacgtttatttgggcatctgtttcaccttcatctttggcgctctcctg
gagtacgcctgtgctcatttttacaccatgcagcaccaaaccctggaagatctccacagg
gagcttctgagggagttctgcgagtggaacggaaacggctcgatccccatcgtcgggccg
agccagccgaaccagtcagcagagatcggctccaccgcagaggaggccactgagcagtca
gtgaacagtgacattaagaatcctccagcagcaaaagagaaagtgcagagtcggggctgc
ggtctgtcgtctgtgaaggatgcgtcacgcagagccgcttctgtcttcatcgtggaaaat
ccgcacaatatcgatagtcacgcccgcaccgtttttcccacagctttcctggttgtcaat
atcctttactggctttattatctctttctctga
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