Oryzias melastigma (Indian medaka): 112153538
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Entry
112153538 CDS
T07439
Symbol
rmnd5b
Name
(RefSeq) E3 ubiquitin-protein transferase RMND5B
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112153538 (rmnd5b)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112153538 (rmnd5b)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
112153538 (rmnd5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
Rtf2
zf-RING_2
GRAS
Motif
Other DBs
NCBI-GeneID:
112153538
NCBI-ProteinID:
XP_024139610
Ensembl:
ENSOMEG00000010009
LinkDB
All DBs
Position
LG10:18605104..18612019
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AA seq
391 aa
AA seq
DB search
MEQCLCVERELEKVLHRFVTYGHQSEERLDELLRSVCDIRAQLVAFGVQDADLSVLSQTM
AQCCKNIKETVQMLASRHKDIHGSVSKVGKAIDRNFDAEISAVVAETVWDTPERQKYLSE
TIVEHLYRQGMLSVAEDLCQESGVVIDMSMKQPFLELNRILEALRMQDLRPALEWAVTNR
QRLLDLNSSLEFKLHRLYFISLLSGGIGNQMQALQYARHFQPFASQHQRDIQILMGSLVY
LRHGIENSPYRSLLETNQWAEICNIFTRDACALLGLSVESPLSVSFASGCMALPVLMNIK
QVIEQRQCSGVWTHKDELPIEIDLGKKCWYHSVFACPILRQQTSESNPPMKLICGHVISR
DALNKLTNAGKLKCPYCPMEQNPSHAKQIYF
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtgtctctgtgtggagcgggaactggagaaggtgctgcatcgcttcgtgaca
tacggccaccagtctgaggagaggctagatgaactactgcgcagcgtctgtgacatacga
gctcaactagttgcttttggagttcaagatgcagacctatcagtcctatcccagactatg
gcccagtgttgtaaaaatatcaaggaaacggtgcagatgctagcctctcgacataaagac
atccatggcagtgtgtcgaaagttggcaaagccatcgacaggaattttgatgcagaaatc
agtgcagtggtggcagaaacagtgtgggacaccccagaaagacagaaatacctgagcgag
accattgtggagcatctgtacagacaaggcatgctcagcgttgcagaggacctttgtcag
gagtctggtgtagttattgacatgagtatgaagcaaccttttctggaactaaacaggatc
cttgaagctctgcgaatgcaggacctcaggccagcattagaatgggccgttacaaatcgc
cagcgccttctggacctcaacagcagtttagagttcaagttgcaccgcttgtacttcata
agtctgctcagtggaggaatcggtaaccaaatgcaggctctgcagtatgccagacacttc
caaccctttgcttctcagcaccagagagatatccagatcttgatgggtagtttggtttat
ttgcgtcatggtatcgagaactcaccgtatcgcagtttgcttgagacaaatcagtgggcc
gagatctgcaacatctttaccagagatgcctgcgctttactgggcctctctgtagagtct
cccctaagtgttagttttgcatcagggtgcatggccttgccagtgttgatgaacatcaaa
caggtgattgagcagcgacagtgcagtggagtctggacccacaaagacgagctgccgatt
gaaatcgacttggggaagaaatgctggtaccactctgtgttcgcctgcccgattcttcga
cagcagacctcggaaagcaacccgcccatgaagctcatctgtggccacgtcatctccaga
gatgccctcaacaaactcaccaatgcggggaagttgaaatgcccgtactgtcccatggag
cagaatccgtcacacgccaagcagatttacttttga
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