Oryzias melastigma (Indian medaka): 112153540
Help
Entry
112153540 CDS
T07439
Symbol
gpc3
Name
(RefSeq) glypican-3 isoform X1
KO
K08109
glypican 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oml00535
]
112153540 (gpc3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
112153540 (gpc3)
Proteoglycans [BR:
oml00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
112153540 (gpc3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
Others
112153540 (gpc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
Motif
Other DBs
NCBI-GeneID:
112153540
NCBI-ProteinID:
XP_024139612
Ensembl:
ENSOMEG00000015742
UniProt:
A0A3B3DMF2
LinkDB
All DBs
Position
LG10:22188341..22328647
Genome browser
AA seq
598 aa
AA seq
DB search
MLLKFTVRSPSRPPAMVKVCSSARGALLLCAFLQLFPLPGGQVPNCQEVRAVFHSLHPGS
KWVPETPVSGADLQICQTKGPTCCSKKMEDRYQVAARSNMESGLQVVSSQLKRLIIQNAA
IFQEAFDLVLRHGRNSTLTMLKSEFPGLGSGAQGSVVQLFRDMSLYTLGSDSTVDNMVSV
FLSKLFPLTHRRLLGGSAASVKEECLRGAWKDSGAFGSYPKLIMTRLSRSLLATRVFLQA
LNLGIEVVNTTHHLRPSRDCSRALLRLWYCPHCQGVLGPPPCRGFCQAVMQSCLGGAAEV
QPHWRRYIDGLGKLAGGMRGEQDMEAVVLRLPAMIKLALKHAVSTRSHLSTLVSGICGHA
PQRAARSIDPPPPPLHQPPAATAARGAQPSDSDETLAGLRREFMTSLKGFSTFYSGLGEA
LCSREPTSANHSLCWNGQEMTDRFSGPGLKRLQVESKSNKPLEPIISQIIDKLKHINQLL
QMVAVSEKRWRAQSRGGGADGWGDEDEEGFQSGDCDDEDECMGVSGLGPPLRRKRLRIFA
DLSDNLAMDDFAFQEQLLTPRLATGGVGGVSSPAASLKRSCLVSVHSVMVALLLVCHH
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaagtttaccgttcgttcgccctcacgtccgcctgccatggttaaggtttgc
tcgtcagcgcgcggagcgctcctcctgtgcgccttcctccagcttttcccgctccccggc
ggacaggtgccaaactgccaggaggtccgcgcagtcttccactccctgcaccccggctcc
aagtgggtccccgaaaccccggtgtcaggtgccgatctgcagatctgccaaaccaaaggc
ccgacctgctgctccaagaagatggaggaccgctatcaggtggctgcacgcagcaacatg
gagtctggtctgcaggtcgtcagctcgcagctcaaacgtctcatcatccagaacgctgcc
atcttccaggaggccttcgacctggtgctgcgtcacggccgcaactccaccttgaccatg
ctgaagtcggagttcccgggtttgggaagcggagcccagggctcagtggtgcagctcttc
cgggatatgtccctttacaccctgggctcggactccacggtggacaacatggtctccgtg
ttcctcagcaaactgtttcccctcacgcaccgccgcctcctcgggggaagcgccgcctct
gtgaaggaggagtgtctgcggggagcctggaaggactcgggagcttttggctcctatcct
aaattgataatgacacgtttgtctcgctccctcctggccacacgagtctttctgcaggcg
ctgaaccttggcatcgaggtagtcaacaccacgcaccatctgcgacccagcagagactgc
agccgggccctgctccggctgtggtactgcccgcactgccagggcgtgctgggcccgccg
ccgtgccggggcttctgtcaggccgtgatgcagagctgcctggggggagcggcggaggtg
cagccccattggaggagatacatagacgggctggggaagctggctggtggcatgaggggg
gagcaggacatggaggcggtggtgctccgactgcctgccatgattaaactggctctcaag
catgctgtgagcacgcgcagccacctcagcaccctggtgagcgggatctgcggacacgct
cctcaaagggccgcgcgctccatcgaccctcctcctcctcctcttcatcagccccccgcc
gccaccgcagcccgcggcgctcagccctcggactctgacgagactttggcgggcctccgc
agggagttcatgaccagcttgaaaggcttcagcaccttctacagcggtctaggggaggcg
ttgtgcagccgagagcccacgtcggcaaaccactccctctgctggaacgggcaggaaatg
acagacaggttttctggtcctggtctgaagcgccttcaagtcgagtccaagagcaacaag
cctctggagccgatcatcagccagatcatcgacaaactcaaacacatcaaccagctgctt
cagatggtggcagtgtcggagaaacgctggcgagcccagtcacgtggaggtggagcagac
ggctggggcgacgaggacgaggagggcttccagagcggagactgtgacgatgaagacgag
tgcatgggggtgtctgggctgggcccgccactcaggcgcaagcggttgcgcatttttgca
gacctttctgataacctggccatggacgacttcgccttccaggagcaactgttgacccct
cgacttgcgaccggtggagtcggaggcgtgtcctcgccggcggcttcgctcaagaggagc
tgcttggtctctgttcactctgtgatggtcgccctgcttctggtttgtcaccactga
DBGET
integrated database retrieval system
