Oryzias melastigma (Indian medaka): 112153562
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Entry
112153562 CDS
T07439
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112153562
04082 Neuroactive ligand signaling
112153562
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112153562
Ion channels [BR:
oml04040
]
Ligand-gated channels
GABA-A
112153562
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF7205
Motif
Other DBs
NCBI-GeneID:
112153562
NCBI-ProteinID:
XP_024139645
Ensembl:
ENSOMEG00000016579
LinkDB
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Position
LG10:complement(22790033..22836978)
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AA seq
455 aa
AA seq
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MWIKEGAPSLLICLLALTTLWKTRSVNADATSDAFKTNITLFTRILDRLLDGYDNRLRPG
LGDRVTEVKTNIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLTFHGPMNILPLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTMRLTVHAECPMHLEDFPMDFHSC
PLKFGSYAYTISEVTYAWTRNASDSVVVEGESSRLNQYDLLGQTVGQETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVSEKKKERASV
MKKNNAYAVAVANYAPNIAKDSSTLPTIAKGGAADPSKPKLEGKAQDSKKTFNSVSRIDR
MSRIMFPVLFGTFNLVYWATYLNREPVIKDMVPSN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcaaggaaggcgctccttcactcctcatctgcctgctggcactcacaactctc
tggaaaaccagatcggtgaatgctgatgccacatcggatgcctttaaaaccaacatcacc
ctgttcacgcgcatcttggacagactgttggatggctatgacaaccgtctgcggcctggt
cttggagacagggtaactgaggtgaagaccaacatctacgtcaccagctttggacccgtt
tcagacacagacatggagtacacgatagacgttttcttccggcaaagctggaaagacgag
aggttgacatttcacggaccaatgaacattctgcctctcaacaacctcatggcgagtaag
atctggaccccagacaccttctttcacaacgggaaaaagtctgtggctcacaacatgacc
atgccaaacaaactcctgaggatcaaagacgacgggactctgctgtacaccatgaggtta
actgtgcatgctgagtgccccatgcatctggaggatttccccatggacttccattcctgt
ccactaaaatttggcagctatgcgtacacaatctcagaagtcacttacgcgtggacccga
aacgcttctgactcagtcgtggttgagggggagagctctcgcctgaaccagtatgacctt
cttgggcaaactgtcggtcaagaaaccatcaaatccagcacaggtgaatacaccgtgatg
acggctcatttccatttaaagaggaagatcggttactttgtcatccagacgtacctgccg
tgcatcatgaccgtcatcctttcccaggtctctttctggttgaacagagaatctgtgcct
gctaggactgtgtttggtgtgaccactgttctgacaatgacaactctgagcatcagtgcg
aggaactcgctgccgaaagttgcgtacgccactgccatggactggttcatcgctgtctgc
tacgccttcgtcttctccgctttgattgagtttgccaccgtcaattacttcacaaagcga
ggctgggcttgggatggaaagagtgtcgtgagcgagaagaaaaaggagagggcatctgtc
atgaagaagaacaatgcctacgctgtagcagtcgccaactacgcaccaaacattgccaag
gactccagcacccttcccaccattgccaaaggtggcgctgcagatccaagcaagcccaaa
ttggagggtaaagcccaagacagcaagaagacatttaacagcgtcagcagaatcgacagg
atgtcccggattatgtttcccgtcctctttgggacattcaacctggtctactgggccaca
tacctaaacagagaacccgttataaaggatatggtcccctccaattag
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