Oryzias melastigma (Indian medaka): 112153619
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Entry
112153619 CDS
T07439
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04080
Neuroactive ligand-receptor interaction
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112153619 (gabra4)
04082 Neuroactive ligand signaling
112153619 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112153619 (gabra4)
Ion channels [BR:
oml04040
]
Ligand-gated channels
GABA-A
112153619 (gabra4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Hmw_CFAP97
Motif
Other DBs
NCBI-GeneID:
112153619
NCBI-ProteinID:
XP_024139742
Ensembl:
ENSOMEG00000016611
UniProt:
A0A3B3CDB9
LinkDB
All DBs
Position
LG10:complement(22869592..22900914)
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AA seq
554 aa
AA seq
DB search
MVSAQKKEMVTATRPACIGTLVHFFFLATCVEEICGQTRRDEKTNPENFTRILDRLLDGY
DNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQMWIDRRLMYEGPMEILRL
NNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLVDF
PMDAHACPLKFGSYAYPKTEMIYTWTKGPQHSVEVPEESSSLVQYDLTGQTVSSETIKSI
TGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQIERAKKKPAKCP
PGPQTTPVKVKDTEEVLQQIPDSNGSLRKRMNNIALQESSSQQRAQSSTNISGLGRGRPL
RPLASGANGSSSTLSRTSPKSGSLLSVASSAQLVKSTPQAAASTPDIMAGTPCKPGTSST
SLQHLLGPKLERIQMMGNKLEPKQTPCSQPTTAGMGGTSKIDKYARILFPVSFGAFNMVY
WVVYLSKDSMVSKG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgcccagaagaaggagatggtgacagcgacgcgccccgcttgcatcgggacc
ctcgtccactttttctttttggcgacttgtgtggaggaaatctgtggacagacacggagg
gatgaaaagaccaacccggagaattttactcgaattttggaccgacttctggacggctat
gacaacaggctgcgacctggatttggaggtccggtgactgaagtcaagactgatatttat
gtgacgagttttgggcccgtctcagatgttgaaatggaatacacgatggacgtgtttttc
cgtcagatgtggatcgatcggcggctgatgtacgagggtccgatggagatcctgaggctg
aacaacctgatggtgactaaggtgtggacgcccgatacgttcttcaggaatggcaagagg
tcagttgctcacaacatgacggcgcccaacaagctgttccgcatcatgaagaacggcacc
atcctttacaccatgaggttaactatcagtgcagagtgtcccatgaagcttgtggatttc
cccatggatgcacatgcatgtcctctcaagtttgggagctatgcttatcccaaaaccgag
atgatctacacctggacaaaagggcctcaacattcggtggaggttcctgaagagtcctcc
agcctggttcagtatgatctcacaggccagacagtctccagtgagacaattaaatccatt
acaggtgaatacgtggtgatgacggtctacttccacttgaaacgtaaaatgggctacttc
atgattcagacatatatcccctgcataatgacagtaatcctctcccaagtgtccttctgg
ataaataaagaatccgtcccggcgcgcacggttttcggcatcacgaccgtcttgaccatg
acgaccctcagcatcagcgcccgccactcgctccccaaggtctcctacgccacggccatg
gactggttcatcgccgtttgcttcgccttcgtcttttctgccctcattgagtttgcggct
gtcaactatttcaccaacgcacagattgagcgggccaagaagaagccggccaaatgtccc
ccggggcctcagaccacgcctgtcaaggtgaaggacacagaagaagtgctgcagcaaatt
ccagattccaatggctccctgagaaagcggatgaataacatcgcactccaggagtcgagc
agtcagcagagagctcagtcctccaccaacatctcaggactcggaaggggaagaccttta
agacctctggccagcggggccaatggcagctcctccaccctctcccgcaccagcccgaag
tctgggagcctgctcagcgtggcctcctcggcacaactggtgaagagcacacctcaggca
gcagcttccacgccagatataatggcagggacgccgtgcaagccgggaaccagctccaca
tccctgcagcatctgctggggcccaaactggagcgtatccagatgatggggaacaaactg
gagccaaagcagacgccgtgctctcagccgaccactgctgggatgggtggaaccagcaaa
attgacaaatacgcacggatcctgttcccggtgtccttcggtgcgttcaacatggtttac
tgggtggtttacttatcgaaggactcaatggtgagcaaagggtag
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