Oryzias melastigma (Indian medaka): 112153693
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Entry
112153693 CDS
T07439
Name
(RefSeq) integrin alpha-6
KO
K06485
integrin alpha 6
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04382
Cornified envelope formation
oml04510
Focal adhesion
oml04512
ECM-receptor interaction
oml04514
Cell adhesion molecule (CAM) interaction
oml04518
Integrin signaling
oml04810
Regulation of actin cytoskeleton
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112153693
04514 Cell adhesion molecule (CAM) interaction
112153693
04518 Integrin signaling
112153693
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112153693
09142 Cell motility
04820 Cytoskeleton in muscle cells
112153693
04810 Regulation of actin cytoskeleton
112153693
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112153693
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112153693
04515 Cell adhesion molecules [BR:
oml04515
]
112153693
04090 CD molecules [BR:
oml04090
]
112153693
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112153693
Exosomal proteins of breast milk
112153693
Cell adhesion molecules [BR:
oml04515
]
Integrins
Integrin alpha subunits
112153693
CD molecules [BR:
oml04090
]
Proteins
112153693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
DUF11
MFS_Mycoplasma
Motif
Other DBs
NCBI-GeneID:
112153693
NCBI-ProteinID:
XP_036069704
LinkDB
All DBs
Position
LG10:complement(7999029..8012798)
Genome browser
AA seq
1043 aa
AA seq
DB search
MRSMLKLCLTVTLWIILHFQLFNVAAFNLDTQNIMQKKGDPGTLFGFSVSFHEQLSPTRK
KLLLVGAPRAKHQDHVNVTGVVYMCDLSTTSERCQPIQFDHKEFLSSKGTNNQWMGIKVT
SQGAGKNVMACAHRYQHPKPYSPNLLTGQCYLLGDQLQVGSEERSWRRVVCDNGHLANRR
NNHEWFAYCQQGHGASFAKDNTSVLFGAPGAYEWKGIVRMEVLDNLDYTNENSRETGFTD
RFDHERIPLQPNSYLGFSVDSGMSLIRKGELTIVSGAPRGGFSGQVAFLKADPVAETNLL
VEQVLSGPGLASSFGYDLTVVDLNADGWEDLAVGAPQFYLKNEDIGGAVFIYINRKGKDW
DNIVPVPLYGQRESMFGLAVENIGDINQDGYGDIAVGAPYEGSGRVYIYCGSAEGVHKEP
SQVISPELKTVNLFGYSLSCNMDVDDNQYPDLAVGSLSDSVFVFRARPVVSVRTNMKITP
SHVNIIKQRCDEQTCAFSGQACFAYAAKPASYNPKLTLNYIFEADSERKTSRSRVELLFS
SQGKLVLPEQGKQKCTDIRLRLVRDIRDKLSSIPVSVTVSLWSSEEGTGANADESRITPV
LNFYQQKTTVSEIIIINDGCGDDNICQSNLQIQYNFCSKKTKNGQVVFTSLVRQDGIAVI
TPSDEDIALEITVTNRNGDDAHQSRVIITLPDTLRYSSVVHGEKEFSCSANENGTLIECE
LGNPFHRDAAITYYIILTTTGISLSTRVVNATLQLQTTSVQNLQPVEVLAKVVFELELKM
YGVVRPSQVSLGDILKGESAIHSLDEIGPSVQFDFKIINSGRPLKSFTNASLNIYWPKET
SVGKWLLYLTHISSEGVRPVPCSPANELNPLKHVKGWNVPSRQKRDATLEALSSEGLTFL
LKKRKHKTLSCSDGLTCVEIRCPLLELDSTAMVVLHSRLWNATLEEDYSHLSFLDIMVDV
TLSLNNAPENIGLKSETNATQVKLTVFFERKTEFLTKVAWWIILLTVITLVLLLGFLCYT
LWKYKCVDRLTHKKKASDDPVKG
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcatgttaaagctctgcctcacggtgactctgtggattattttgcactttcaa
cttttcaatgttgctgctttcaacctggacacacaaaatatcatgcagaaaaaaggagat
ccagggactctttttggattttctgtttcctttcacgagcagctgagtcctaccagaaag
aaactattacttgtgggagcaccacgtgcgaaacaccaggatcacgtgaatgttacagga
gttgtttacatgtgtgacttgagcacaacatctgagcgttgtcagcccatccagtttgac
cacaaagagttcctcagtagtaaaggaacaaataaccaatggatgggaattaaagtcaca
agccaaggtgctggtaaaaatgtaatggcatgcgctcatcgatatcagcacccgaaacct
tacagccctaacttgttgacgggtcagtgttacctgctaggagaccagctgcaggtcggg
agcgaggagagatcatggcggagggtggtttgtgataatggacacttggccaatcggcgg
aacaaccacgagtggtttgcatactgccaacagggacacggagcatcgtttgccaaggat
aatacttctgtactttttggagctccaggagcttatgaatggaaaggaattgtgcgtatg
gaagttctggataacttggactatacaaatgaaaattctcgagaaactggatttacagat
cgctttgatcatgagcgcattcctcttcaaccaaacagctacctgggattctctgtagac
tctggaatgtctctaatcaggaagggggagctgacgattgtgtcaggagccccccgagga
ggcttcagcggccaggtggccttcctgaaggcagaccccgtggctgagacaaacttgctg
gtggagcaggttctctctggaccgggcctggcctcctcctttggctatgatttaacagtc
gtcgatctcaatgctgatgggtgggaagacctcgctgttggagcccctcagttctacttg
aaaaatgaggatattggaggagccgtcttcatctatattaacaggaaggggaaagactgg
gataatattgttccagttccgctctatggacaaagggagtccatgtttggtttggctgtg
gaaaacataggagacatcaatcaagatggctatggagatattgctgttggagctccatat
gaaggctccggtcgagtgtacatttactgtggctcagcagagggggtccacaaagaacca
tcccaggtgatctctcccgaattaaagacggtgaatctctttggatattcgctgtcttgt
aacatggacgtggacgacaatcaataccctgatctggcagttggatctctctcagactct
gtttttgttttcagagcacggccggtggtcagtgtcagaactaacatgaaaataacgcca
agtcatgtaaacatcattaagcaacggtgtgatgaacaaacatgtgctttttcaggtcag
gcatgctttgcttatgcagcaaaacccgcatcgtataacccaaaactgacactaaactac
atttttgaggctgattccgaaagaaagacatccagatcaagagtggaacttctgttttcc
tctcaaggaaaactggtgcttcctgaacaaggaaaacaaaagtgtactgacatcagactt
cgacttgtgcgggacattagagacaagctgagcagcatccccgtctctgtcactgtgtcc
ctatggagctctgaggaggggaccggagcgaatgctgatgagtccagaatcactcctgtc
ctcaacttttaccagcagaaaaccactgtatcagagattataatcataaatgatggctgt
ggagatgataatatctgtcagagtaacctacaaattcagtacaatttttgttccaagaag
actaaaaatggacaagttgtttttacatcactagtccgacaggatggcatcgcagtcatc
actccgtctgatgaagacatagccttggagatcactgtgaccaacagaaatggcgatgat
gcacatcagagtcgcgtcatcattaccctcccagatactctgaggtactcgtctgttgtt
cacggagaaaaagagtttagctgctccgccaatgagaatggcacactgatagaatgtgag
ctgggaaacccgttccatagagacgctgcaattacatattacatcattctaacaactact
ggcatctcattgagcacaagagtcgtgaatgcaactctgcagcttcaaacgacaagtgtg
cagaatctacagccagttgaggttttggccaaggtggtttttgagttggagctgaaaatg
tatggagtcgtcagaccttctcaagtttctctcggtgacattttgaagggtgagagtgcc
atccattcactggacgaaataggaccatcagtccagtttgattttaagataataaactca
ggcagacccctgaagtctttcacgaatgcgtctctgaacatctactggccaaaggagact
tctgtggggaaatggctcctgtacttgactcacatcagcagtgagggtgtccggcctgtg
ccatgctcacctgcaaacgaactgaatccactgaaacatgtcaagggctggaatgttcca
tcaagacaaaaacgtgacgccacattagaagctctctccagtgaagggttaacatttctt
cttaagaagagaaagcataaaaccttgagttgttctgatggactgacatgtgtggagata
cggtgccccctgctggaactggacagtactgctatggtggttctccattctcgtctctgg
aatgcaactttggaagaggattacagccatttaagcttccttgacattatggtggatgtc
actctcagcctcaacaacgctccagaaaatattggattgaaatcagaaacaaatgcgact
caggttaagctgacggtattctttgaaagaaaaacagaatttctgactaaagttgcgtgg
tggataatcctcctgacagtcatcactttagtgctgctgttgggctttctgtgctacact
ctgtggaagtataaatgtgttgaccgcctcactcacaagaagaaggcctcagacgatcca
gtgaaaggctga
DBGET
integrated database retrieval system