Oryzias melastigma (Indian medaka): 112153707
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Entry
112153707 CDS
T07439
Symbol
slu7
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112153707 (slu7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112153707 (slu7)
Spliceosome [BR:
oml03041
]
Complex C
Other components
Step II factors
112153707 (slu7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
TAF4
zf-CCHC_4
CdiI_N
Motif
Other DBs
NCBI-GeneID:
112153707
NCBI-ProteinID:
XP_024139844
Ensembl:
ENSOMEG00000006235
LinkDB
All DBs
Position
LG10:complement(16504293..16508534)
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AA seq
568 aa
AA seq
DB search
MTEQVTEQASASTEGIVNMDEPKKMTREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHI
PQYISSVPWYIDPSKRPTLKHQRPQDENQQQFSAIGEWYKRGVQENTVVTKFRKGACENC
GAMTHKKKDCLERPRKVGAKFTGTDIAPDEHSQVQLMLDYDGKRDRWNGYDPEEHQRIVE
EYAKVDLAKRTLKAHKLQDELASGKLDQNEYEHDSEDEDEDKYADDIDMPGQNFDSKRRI
TVRNLRIREDTAKYLRNLDPNSAYYDPKTRAMRENPYSNTGMNPDEVGYAGDNFARYSGD
TIGMAQTQLFAWEAYERGSEVHLQADPTKLELLHRSFKVKKEDFKEEQRETILEKYGGQE
HLDAPPRELLLAQTEDYVEYSRHGAVLKGLEKAVARSKYEEDVLINNHTCIWGSYWKDGF
WGYKCCHSMIKQSYCTGDTGIKTNISDCVPFEDGLIEEQEEEIPKTLLEMHQDKMKEKKK
KKKNKKNKKRASDSSDSEDEEKKKEKLKKALDAEDKRVKQVDAVMQLDERKRPYNSLYEI
KAPTEEEMEAFRMKRRRPDDPMASFLDQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcaggtgacggagcaggcgagtgccagtacagagggcatcgtgaacatggat
gagcccaagaagatgaccagggaggactggaggaagaagaaggagctggaggagcagagg
aagctgggaaatgctccagctgaggtggacgaggagggaaaggacattaacccccacatt
ccacaatacatttcatcagtcccatggtacatcgacccatcgaaaagaccaacactaaaa
catcagaggccacaggatgaaaaccagcaacagttctcggccattggcgaatggtacaag
agaggagtccaggagaacacagtcgtcaccaaattccgaaaaggtgcttgtgaaaactgc
ggtgccatgacacacaagaagaaagactgtttggagcgacccaggaaagttggtgcaaag
ttcacaggaacagacattgctccagatgaacacagtcaggttcagctgatgttggattat
gatggaaagcgtgatcgctggaatggatatgaccctgaggagcatcagcgcatagttgaa
gagtacgctaaagtcgatttggctaaaaggactctgaaggcacataaacttcaggatgag
ttggcatcaggcaaattggaccaaaatgagtatgaacacgacagcgaggacgaggatgaa
gacaagtatgcagatgacatcgacatgcccggtcagaactttgactccaagagacgaatc
accgtcaggaatctgcgtatcagagaagacacagctaaatacctaagaaatttggatcca
aattcagcgtactacgatccaaaaacccgagccatgcgagagaacccctactccaacact
ggcatgaaccctgatgaagttggatatgctggagacaactttgctcgctactctggggac
acaatcggcatggctcaaacacagctgtttgcctgggaggcttatgagagaggttctgag
gtccaccttcaggcggaccccacaaagctggagctgcttcaccgctcctttaaagtgaag
aaggaagacttcaaagaggagcagagggagaccatcctggagaagtatggaggacaagag
cacttggacgcgcccccacgggaactgctgttagcccaaactgaggactacgtggaatat
tctcgtcacggcgccgttttgaaaggtcttgaaaaggcagtcgcccgctccaagtacgag
gaggacgtcctcatcaacaaccacacatgtatttgggggtcgtactggaaagatggcttc
tggggatacaaatgttgccactcaatgattaaacagagctactgcactggagacactggg
attaaaacaaacatttccgactgtgttccgtttgaagacgggctgatcgaagagcaagag
gaggaaattcccaagactctcctggaaatgcatcaagataaaatgaaagagaagaagaag
aaaaagaagaataagaagaacaagaagcgtgcctcagacagcagtgactccgaggatgaa
gaaaagaagaaggagaagttgaagaaggctctggacgcagaggacaagcgggtgaagcag
gtggatgcagtcatgcagctggatgagaggaagaggccctacaacagcctgtatgaaatc
aaggcgcccaccgaggaagagatggaagccttccgcatgaagcgcagacgaccagacgat
cccatggcatccttcctggatcagtga
DBGET
integrated database retrieval system