Oryzias melastigma (Indian medaka): 112153727
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Entry
112153727 CDS
T07439
Symbol
npas4a
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112153727 (npas4a)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112153727 (npas4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
PAS
Motif
Other DBs
NCBI-GeneID:
112153727
NCBI-ProteinID:
XP_024139869
Ensembl:
ENSOMEG00000017616
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All DBs
Position
LG10:complement(11057497..11063065)
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AA seq
930 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKDLLPISEADKARLSYLHIMSLACMYTRKSVFFTQEM
GTAASPEESETFLSFHELSELMQALPGFLMLLTGEGKLLYLSDSVSEHLGHSMVDLVSQG
DSVYDIIDASDHLIMRNNLSASTSLEMDRLFRCRFNTTKSVRRQSAGNKLVLIRARCLSP
PSSSPATGSYWTSNPVWVCFCTPLEPQPTRSGSGAERESTSTPPLTDTNLFLACFHSQHG
RDMRLQSAQNSVSTFLGFDVAELRSRSWYSLLHPQDLSHASAQHRSLLREGGEGRAEMVV
RVQAEDQSWVWLYMVLQLQPGDVPISSSNYIVSDSEAWSVRQQLSSEQTQLTLVLSVGGS
QQESLSLQSPDTLSSPDQVFTPGSSGLSAQSFDFSTAGCSVGSSDEPGSSVTEAMQVEGD
PRSSISSLEEESFFQQHITETPSAASSPTPVTVETVADLDFLTQNILLPPSFQLDPPLPA
LPLPLPPVPSSQAQQTKEFVCTPPYTPQVGGASFPFNEPLFSFDPTGTTTPPPSATTATS
TTSLAPSAPSTAPPTTAPSPTPPTTLSTKMPLALPISSTDLLFPGELCSGSMYEKLPPTP
DSPGDGDCTVMTLPEVRGPLYVDVPLGPLQCPPEGLLTPEASPGKQPCISFFSLEREKER
AEISLLAQHISSLAEGFYLDPLLSKLSPPSLSPSSSPPSPFLSPVIESADSVHMLREFYP
IKAWRSLDIPILLDDDDSLFEESILESLLQDDCAPLQTSGLSPPPLSTSPMPNSSSPSSP
QTPVCWRQTSQFEGVGHICSVQSAQCNSLAGCGATVAAEVMAEGEGLAEEAMEVEMVSSP
MSSCSSIPASPPLVVTASPRPATSTPIASPTPAVSCTQSLLEELAVLEPMFGAGASIAPG
LGQQPELYQLQCHPSPQCFHKDGSGSVPPF
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctcaaccaaaggagcgtcgaaggctcgccgggaccagatcaacgccgagatc
cgaaacctcaaagacctgctgcccatctctgaggctgacaaagcgcggctctcatacctg
cacatcatgtcgctggcgtgcatgtacacccggaaatccgtgttcttcactcaagaaatg
ggaactgccgctagtccagaggagagcgaaacgtttctgtctttccacgagctgtcggag
ttgatgcaggcgctgccaggcttcttgatgctgctgactggagaggggaagctcctctac
ctgtcagacagcgtgtctgagcacctcggacactccatggtggatcttgtgtcgcaaggg
gacagtgtttacgacatcatcgacgcctcagaccacctgatcatgaggaacaacctgtct
gcttctacatcgcttgaaatggaccgtctcttccgctgtcgttttaacaccactaagtcg
gtgcggaggcagagcgctgggaacaagctggttctgatccgagcacgctgcctctctcct
ccctcctcctcccccgcaaccgggtcatactggacttccaacccagtgtgggtgtgcttc
tgcactcctctggagccgcagcccacccgctccggttccggagccgagagggagtccacc
tccactcctcctctgactgacaccaacttattcctggcttgcttccactcccagcatgga
cgtgacatgaggctacagtcagcacagaatagcgtgagcacctttctgggctttgatgtg
gcagagttgcgctcccgttcttggtacagcctcctccacccgcaagatctgtcacacgcc
tctgctcagcaccgcagtctattgagggaaggaggagaaggcagagcagaaatggtggtg
cgtgtccaggctgaggaccagtcttgggtttggctctacatggtgcttcaactgcagcct
ggagacgttcccatcagcagcagcaactacattgttagcgactctgaggcttggtctgtg
cgtcagcagctgagctcagagcagacccagctgaccctggttctgagtgttggtggctct
caacaggaaagcctcagccttcagtctccagacaccctctccagcccagaccaggtcttc
acaccaggcagcagtggcctgtctgcccagtcatttgacttcagcactgctggctgcagt
gtgggctcctcagatgaacctgggagctccgtcacggaggccatgcaggtggagggggac
ccccgctccagtatctcctctctggaggaggagagcttctttcagcagcacatcacagaa
accccctctgctgcctcttcccccacccctgttactgtcgaaacagtagcagacctagac
tttttgacccagaacattctcctgcctccgtctttccagctagaccccccactgccagct
ctccccctgcctctcccccccgtgcccagctcacaagcccaacaaaccaaagagtttgtg
tgcactcccccttacaccccccaagtgggtggggccagcttcccgttcaatgagcccctc
ttcagttttgacccaacaggcaccaccactcctccaccttctgccacaactgccacctcc
accacctctttggccccctccgccccttccacggctccgccaacaacagctcccagcccc
actcctcccaccaccctctccaccaagatgccactggcattgcccatctcctctactgac
ttgctcttccccggtgagctctgcagtggctccatgtatgaaaaactcccccctacaccc
gacagtcctggagacggggactgtacggtgatgacccttcctgaggtgaggggtccacta
tatgtagatgttccactgggacctctacagtgcccccctgaaggcctcctcaccccggag
gcctcacccggcaagcagccctgcatttccttcttctccctggaaagggagaaggagaga
gcagaaatatcccttttagctcaacacatcagctctttggctgagggattctatctcgat
ccactgctgtccaagctttcccccccttctttgtcaccttcatcctcccctccctcccca
ttcctgtctccagtcattgaatctgctgactccgtccacatgctgagggagttttatccc
atcaaagcatggagaagtctggacatccccatcctcctggatgatgatgactctctgttt
gaagagagcatcctagagtccctcctgcaagatgactgtgctcctcttcagacatccggt
ctctccccccctcccctctccacctctcctatgcccaattcctcaagcccaagctctcct
cagaccccagtgtgctggcgccaaacttcccagtttgagggagtgggccacatctgtagc
gtccaatcggcgcaatgtaactccttggcagggtgcggggcgactgtggctgctgaggtc
atggcagaaggggaggggctggcggaggaagcaatggaggtcgagatggtgtcatctcca
atgtcctcctgctcctccatcccagcttctcctcccctcgtcgtcactgcctccccgagg
cccgccacctccacgcccatcgcctcgcccacgcccgccgtgtcttgcactcagtccctc
ctggaggaactggccgtcctggaacccatgtttggggcaggtgcctcgatcgcccctggc
ttagggcaacaacctgagttgtatcaactccaatgtcatccatcgccgcagtgcttccac
aaagatgggagtggaagtgttcctccgttctaa
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