Oryzias melastigma (Indian medaka): 112153829
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Entry
112153829 CDS
T07439
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112153829 (mms19)
03400 DNA repair and recombination proteins [BR:
oml03400
]
112153829 (mms19)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112153829 (mms19)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
112153829 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
API5
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
112153829
NCBI-ProteinID:
XP_024140015
Ensembl:
ENSOMEG00000009691
LinkDB
All DBs
Position
LG19:complement(83938..109115)
Genome browser
AA seq
1019 aa
AA seq
DB search
MAADSALLLSLVEEFVSGLQDSKAQDAAKGVRDGHFTVLQLVEALGLSLTSSEPQTRARG
VQLLSDVLQEDSAALSQREVEVLIAFYENRLKDNYVVTPPVLRGLLALTRCAALPPGSAV
SMLRSLFQDVHVQSLMIAERACVYNMLINLMDTREAELKSLGADFVFGFVQSMDGERDPR
NLLLAFQIARNIVVRGYDLGKFTEELFEVTSCYFPIDFTPPPNDPHGITKEELVQALRAV
LAGTPKFAEFLFPLLIEKLDSDVQSAKLDALQTLNAFLSRCEHTDTAEFLQGLWSSLRRE
VFQTSSEKIESAALAALTALTSCLSRSVLSSDSEDVLGHFLEVVLKDCEHHLREPDLKLV
WPSAKLLQACSGASYRASRVIAASVLPALTEQYSSKTQCSQRRTLLEVLQRFVQSVKSSR
STEDDDGVLSAHRADLCGVAFAALSESNASLQVTAAALLASLARQTGLLLEADVRLAVDH
LTRLLLTEDDDRVSAAVVECAGVLAELHPAAFATRLIPRLKEEVFSDASQQHSHHAVRRR
CLSALAAVSTQPSVVQESTPVLLQVLKSALTGGVSLEEAVLACRSLQRIAARVQDTEEAG
TCFHDVIIPRLLSLALQAALQEEDSSGRGGALVQEDFLSAVVPVISTSCSRLQPTLAART
ASRAVSLFLDGDVSCLPENSFPPRLQLLQAEEVSWRRSQLVCLLMGCVCALPRGVELPRT
DELLSRLEEMSCTCRHPLSYTAAAKCFAGLVNKSAEGGALDGVIQRVRARICRELDSSSS
PLRTQAFTLLVWVSKALLLRYHPLSTGLTDQLFSLLDDAHLGAAAADGFLLLMSDSPDVL
NRGCHADVRIMYRQRFFSENSAKLVQGFNAAPQEKKPNYLKALSNIVNTLPQQVQVTELP
ALLSLLLEALTCPDQGVQLSTLSCLEPVIASPPPVLLQQLEAVVGRLLALVCSPAMNVRM
SSLRCVRALSLLPAHQVLPFRARVLRALAPPLDDRKRLVRQEAVQARGEWFLIGSPGGR
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggacagtgccttgctgctgtcgctggtggaggaattcgtctccggattgcag
gacagcaaagcacaggacgccgctaaaggtgtcagagatggacacttcactgtgctgcag
ttagtggaggcgctggggctgagcctgaccagctcggagccgcagactcgcgcccgaggc
gtccagctgctgtccgacgtcctgcaggaagactctgccgcgctctcgcagagagaagtg
gaggtgctcatcgcgttctacgagaaccgcctcaaagacaactacgtggtcacgccgccc
gtcttacggggactgctggctctgaccaggtgtgcggcgctgcctccaggctcggccgtg
tccatgctgaggtcgctgtttcaggacgttcacgtccagtcgctgatgattgcagagaga
gcgtgtgtctacaacatgctcatcaacctgatggacaccagagaagctgagctgaagagt
ttgggagcagactttgtcttcggtttcgtccaatccatggacggcgagagagatcctcgc
aacctgctgctagccttccagatcgccaggaacatcgtggtccgaggatacgacctgggt
aaattcactgaggagctctttgaagtgacttcctgctatttccccatcgacttcacgccg
ccccccaacgacccccacggcatcaccaaagaggagctggttcaggctctgagggccgtc
ctcgccggaacgccaaagttcgctgagtttctgttcccgctcctcatcgagaagctggac
tcggacgttcagagcgccaagctggacgcgctgcagacgctgaacgcgtttctgtctcgc
tgcgagcacacggacacggctgagttcctgcagggcttgtggtcgtcgctgcgccgagag
gtgtttcagacttccagcgagaagatagaatctgcagccctcgccgccctcaccgcactc
acttcctgtctgtctcgctcggtgctcagctccgactcggaggacgtcctgggtcacttc
ctggaagtcgttctgaaagactgtgagcatcacctgcgtgagccggacctgaagctggtg
tggcccagcgccaagctgctccaggcgtgctccggcgcctcctacagggcgagccgcgtc
atagcggcgtccgtgctgcccgccctgacggagcagtacagcagcaaaacgcagtgctct
cagaggcggacgctgctggaggtgctgcagcgcttcgtccagtcggtgaaaagcagccgc
tccacggaggacgacgatggcgtgctttccgcccaccgagccgatctgtgcggcgtggcg
tttgccgctctctccgagagcaacgccagcctgcaggtcaccgccgcggccctgctcgcc
tcgctggctcggcaaacgggtctgctgctggaggcggacgtccggctggccgtggatcac
ctgacccgcctgctgctgacggaggacgacgaccgagtcagcgcggctgtggtggagtgt
gcgggcgtcctggcggagctgcaccctgcagccttcgccacgcggctgatccccagactg
aaggaggaggtgttctctgacgcttcacagcagcattcccatcatgcagtgcgtcggcgg
tgtctgtcggctctggcagccgtttccacgcagcccagtgtcgtccaggagagcacgccc
gtcctccttcaggtcctcaagtcggcgctcacaggcggggtttccctggaggaggcggtg
ctggcgtgccgcagtctgcagcggatcgccgcgcgggttcaggacacggaggaggcgggg
acctgcttccatgatgtcatcatcccacgtctgctgtcgctggcgctgcaggcggcgctg
caggaggaggactcctccgggcgggggggcgctctggtgcaggaggacttcctgtcggcc
gtggttcctgtcatcagcacttcctgctccagactccagcccacgctggcggcgaggacg
gcgtccagggcggtctcgctcttcctggatggcgacgtgtcgtgtctgccggagaactct
ttcccgccgcgcctccagctgctccaggctgaggaggtttcatggcggcgctctcagctg
gtctgtctgctcatgggctgcgtctgcgcgctgccccgcggcgtggagcttcctcgcaca
gacgagctgctgtcccgcctggaggagatgagctgcacctgccgccacccgctgtcctac
acggccgccgccaaatgcttcgccggcctggtcaacaagagcgccgagggcggcgctctg
gacggcgtgatccagagggtgagggctaggatctgcagggagctggactcctcctcctcg
ccgctgcggacgcaggccttcacgctcctcgtctgggtttccaaagcgctgctgctgcgg
taccaccctctgtccaccggcctgacggaccagctcttctctctgctggacgacgcccac
ctgggggcggcggcggcggacggcttcctgctgctcatgagcgactccccagacgtcctg
aaccgcggttgccatgccgacgtgcgcatcatgtaccgccagcgcttcttcagcgagaac
tccgccaagctggtgcagggcttcaacgccgctccacaagagaagaaaccaaactacctg
aaggcgctgtccaacatcgtgaacacgctgccccagcaggtccaggtcaccgagctgccg
gcgctgctgtcgctgctgctggaggcgctgacgtgtcccgatcagggcgtgcagctgtcc
acgctgtcctgtctggagcccgtcatcgccagcccccccccggtcctgctgcagcagctg
gaggccgtggtcggccgtctgctcgccctcgtctgcagccccgccatgaatgtccggatg
tcgtcgctgcgctgcgtccgcgctctctcgctcctccccgctcaccaggtgttgccgttt
cgggcgcgggtgctgcgggcgctggctccgcccctggatgacaggaagcggctggtgagg
caggaagcggttcaggcgcgaggagagtggttcctcataggaagtcctggaggaaggtga
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