Oryzias melastigma (Indian medaka): 112153887
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Entry
112153887 CDS
T07439
Symbol
top2a
Name
(RefSeq) DNA topoisomerase 2-alpha
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oml03032
]
112153887 (top2a)
03036 Chromosome and associated proteins [BR:
oml03036
]
112153887 (top2a)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
112153887 (top2a)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Topoisomerases
112153887 (top2a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
112153887 (top2a)
Centrosome formation proteins
Centriole proteins
112153887 (top2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
112153887
NCBI-ProteinID:
XP_024140112
Ensembl:
ENSOMEG00000005005
LinkDB
All DBs
Position
LG19:complement(3801259..3821402)
Genome browser
AA seq
1564 aa
AA seq
DB search
MAEPLKALFENKPLEKTKKDPKRLSVERIYQKKTQLEHILLRPDSYIGSVEPVTQQMWVY
DENVGLNCRDVTFVPGLYKIFDEILVNAADNKQRDKTMSCIKVNIDVENNTISVWNNGKG
IPVVEHKVEKVYVPALIFGQLLTSSNYDDEQKKVTGGRNGYGAKLCNIFSTKFTVETSCK
ESKKTFKQTWYDNMGRTGDPSIKGFDGEEYTCITFKPDLRKFKMSILDKDTVALMTRRAY
DVAGSSKGVKVFFNGKKLPITGFRSYVDMYVKDKVDELGGPLTVIHEVVNERWEVCLTMS
EKGFQQVSFVNSIATTKGGRHIDYVADQVVGRLIEVVKRKNKAGVTVKPFQVKNHMWLFV
NCLVENPTFDSQTKENMTLQQKSFGSTCPLSDKFFKQATSCGIVESIMNWVKFKAQTQLN
KKCSAVKHTKIKGVPKLDDANDAGGKNSIGCTLILTEGDSAKTLAVSGLGVVGRDRYGVF
PLRGKMLNVREASHKQIMENAEINNVIKILGLQYKKNYSDPESLKSLRYGKIMIMTDQDQ
DGSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKASNKKTSLSFYSIPEFNAWKETQTN
HKSWKIKYYKGLGTSTSQEAKEYFSDMDRHRIPFKYSGPEDDEAISLAFSKKKVEERKEW
LTNFMVNRRQRREHNLPEDYLYGQATKSLSYNDFINKELVLFSNSDNERSIPCLVDGFKP
GQRKVMFCCFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQNFVGSNNLNML
QPLGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPVDDNLLKYNYDDNQRVEPEWYIPI
IPTVLVNGSEGIGTGWASKIPNYDIREIISIIHRMLNGEEPLPMLPNYKGFRGTIEHVMN
NQYMISGEVAIIDSTTIEISELPVKTWTQAYKENVLEPMLNGTDKVPALITDYKDYHTDT
TVRFVVKMTEEKLMEAEAAGLHKVFKLQSPLTCNSMVLFDHTGSLKKYESVQDILKEFFE
LRMKYYVLRKEWLTGMLGAESSKLSNQARFILEKIQGTLVIENKPKKVLIKMLQQMGYDS
DPVKAWKEAQKKDEEEVEAEEQQEEEEKEDQSSGPDYNYLLSMPMWFLTKEKKEELCKQR
DAKMTELNTLKGKNPSDLWREDLAAFSEELERLEQQEKEDAAVPVKRPAKGKRPVKVKQE
TLPTPQGRRVVPRVTSTMKAEAHKKADLKKGEGKRGKKAKGDVVVKMEFGEDSENLEQIE
QTGLAARLDKKTKTQTKKALSSKGKQTTLQFSSVSKKPKKNPWSDEESGAESEDEPAVPR
ERVSRAAKAPVTYTLSDSEDEFDDVGKNRTSKRKAVVSDDDDISFAVETGVVSDSDAASP
APAPKAPAAKKVTKKKTVEEPKVSSSSPSDDPAPSKAAAASKTKGTAAKKAAPSKKPAAS
KKKAADTKQPSILDVLSKPKAAAKKATALISSDSENEAKAAKKKPKPVLKRKQSSSDDDS
DSDSGDLMARLKSRASVGTKKTKKWSEDESLHVSEEEEVAPRDKAPRARKPFTFKLDSES
DEDF
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccactgaaggccctttttgaaaacaagcctttggaaaagacaaagaaagac
ccaaagcgtctttcagtggagaggatctaccagaaaaagacccagttggagcacattttg
ctcagacctgattcttacattggctctgttgagcctgtgacccagcaaatgtgggtgtac
gatgagaatgttgggctgaactgccgggatgtgacgtttgtgcctggactttacaagatt
tttgatgagattcttgtaaacgcagctgacaacaagcagcgggacaagaccatgtcatgc
atcaaagtcaacattgatgttgaaaacaacaccatcagtgtgtggaataacgggaaaggg
attcctgtggtggagcacaaagtggagaaggtctacgttcctgctctcatctttggacag
ctcctaacttccagcaactatgatgatgagcagaagaaagtcactggtggacgaaatggt
tacggagccaagctgtgcaacatcttcagtaccaagtttactgttgagacctcctgtaaa
gagtccaagaaaactttcaaacagacttggtatgacaacatggggagaacaggagatccg
agcatcaaaggctttgatggagaggagtacacgtgcatcaccttcaagccagacctgcgc
aagttcaagatgagcatcctggacaaagatacggtggctctgatgaccaggagggcttat
gatgtcgctggatcctccaaaggagtcaaagtgttcttcaatgggaagaagctgcctatt
acaggctttcgtagctatgtggacatgtacgtgaaggacaaggtggatgagctgggcggc
cccctcacggtgatccacgaggtggtcaatgagcgctgggaggtctgcctcaccatgagc
gagaagggcttccagcaagtcagctttgtgaacagcatcgccaccacgaagggaggcaga
cacatcgactatgtggctgaccaggtagttggtcgcctgatcgaagtggtgaaaaggaaa
aacaaagccggtgtgaccgtcaagcctttccaggtgaagaaccacatgtggctgtttgtg
aactgcctggtggagaacccgacctttgactctcagaccaaagagaacatgacgctgcag
cagaagagcttcggctccacttgtcctctcagtgacaagttcttcaaacaggctacgtct
tgtggcattgttgaaagcatcatgaactgggtgaagttcaaggctcagactcagctcaac
aagaaatgttcagccgtcaaacacaccaaaatcaagggtgtgccaaagctggacgatgct
aacgatgcaggagggaagaactccatcggctgcacgctgatcctaacggagggagactca
gccaagacgctggctgtgtccgggctgggagtggtcggaagagaccgctacggagttttc
cctctccggggaaaaatgctgaacgttcgggaggcctcgcacaaacagattatggaaaac
gcggaaatcaacaatgtcatcaagatcctcggcctccagtacaagaagaactacagcgac
ccagaatccctcaagagtctgcgttacggcaagattatgatcatgacagatcaggatcaa
gatggctcccacattaaaggtttgctcatcaacttcatccaccataactggccgtcgctg
ctccgccataacttcctggaggagttcatcacccccatcatcaaggcatcaaacaagaaa
accagtctgtccttctacagcatcccagaattcaacgcttggaaagagactcaaactaac
cacaaatcctggaagataaaatactacaaaggtttgggaaccagcacatcgcaggaggcc
aaggagtacttctccgacatggacagacaccggatcccgttcaagtactcggggcctgaa
gacgacgaagcgatcagcctggcctttagcaaaaagaaagtggaggagcggaaagagtgg
ctcaccaactttatggttaacaggcgtcagcgccgagaacacaacctccccgaggattac
ctctatggtcaggccaccaagtccctgtcctacaacgacttcatcaacaaggagctcgtg
cttttctccaactctgacaacgagaggtccatcccctgcctggtggacggtttcaaaccg
ggtcagaggaaggtgatgttctgttgcttcaagaggaacgacaagcgggaggtgaaggtg
gctcagctggctggttctgtcgccgagatgtcggcgtaccaccatggagaggtctccctg
atgatgaccatcgtcggtttagcccagaactttgtgggaagcaacaacctgaacatgctg
cagcctctgggtcagttcggaaccaggctgcacggaggcaaagactctgccagccctcga
tacatcttcaccatgctcagtcccttggcccgcctccttttcccgcccgttgacgacaac
ttactcaagtacaactacgacgacaaccagcgcgtggagccggagtggtacatacccatc
atccccactgtgctggtgaacggttctgagggaatcggtaccggctgggccagcaagatt
cccaactacgacatcagggagatcatcagtatcatccaccgaatgctgaacggcgaggag
cctctgcccatgcttccaaactacaaaggcttcagaggaacaatcgagcatgttatgaac
aaccagtacatgatcagcggggaggtggcgatcatcgactccaccaccatcgagatctct
gagctgccggtgaaaacctggactcaggcgtacaaggagaacgtgctggaaccgatgctg
aacggcaccgacaaagtccccgccctgatcacggactacaaggactatcacaccgacacc
accgtgcgcttcgtggtcaagatgacggaggagaagctgatggaggcggaggctgccggc
ctgcacaaagtcttcaagctgcagagccccctcacctgcaactccatggtcctgttcgac
cacacgggcagcttgaagaagtacgagtcggtgcaggacatcctgaaggagttctttgag
ttgaggatgaagtactacgtgctgagaaaggagtggctgaccggcatgttgggggcggag
agttctaagctgtcaaaccaggcccgcttcatcctggagaagatccagggcactctggtc
atcgagaacaaacctaagaaggtgttgatcaagatgctgcagcagatgggctacgactcc
gaccccgtcaaagcgtggaaggaggcgcagaagaaggatgaagaagaagtggaggctgaa
gagcagcaggaggaggaagagaaggaggaccagagcagcgggccggactacaactacctg
ctcagcatgcccatgtggttcctgaccaaagagaagaaggaggagctctgcaaacagaga
gatgcgaagatgacagaactgaacaccctgaagggaaagaatccatcggatctgtggagg
gaagacctggctgcgttctctgaagaactggagcgcctggagcaacaggaaaaggaggac
gccgcggtgcccgtcaagcgtcccgccaaaggaaaaagaccggtgaaggtgaagcaggag
acgctgcccactcctcaaggccgccgcgtcgtcccgcgcgtcaccagcaccatgaaggcc
gaagcgcacaagaaggccgacctgaagaaaggagaaggcaagagggggaagaaagcaaag
ggggatgttgtggtgaagatggagttcggtgaagattcggagaacctggagcaaatcgag
caaaccggtttggctgcacgactggacaagaaaacaaaaacccagactaaaaaagctctt
tccagcaaagggaagcaaactactcttcagttctcgtcagtctccaagaagccgaagaag
aatccgtggtcggatgaggaatccggagcagaatcggaagacgaacccgccgtcccgagg
gagcgcgtaagccgggcagccaaagctccggtaacgtacactctatctgacagtgaagat
gagtttgatgatgtgggaaagaaccgcacttcgaagcggaaggccgttgtcagcgacgac
gacgacatcagcttcgctgtggagaccggcgtcgtctctgatagcgacgcggcctctcca
gctcccgcccctaaagctccagcggcgaaaaaagtgacaaagaagaagactgttgaagaa
cccaaagtcagctcgagctctccgtctgatgatccggcgccttctaaggctgcagctgca
agcaaaaccaaagggaccgcagcaaagaaggctgctccttccaagaaaccagctgcttca
aagaagaaggctgcagatacaaagcagccgtccatcttggatgtcctgtcaaagcctaaa
gctgcagccaagaaggctactgctctcatctccagtgactctgagaacgaagccaaagct
gccaaaaagaagcccaaacccgttctgaaacgcaaacagagcagcagcgacgatgactcc
gactctgactctggcgacctcatggcacgcctgaagagcagagcaagcgtcggcacaaag
aaaactaagaaatggagtgaagatgaaagcttacatgtctcagaggaggaagaagtggcg
ccacgagataaagccccacgagcgcgaaaacctttcaccttcaagctagactctgagtcg
gatgaagacttttaa
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integrated database retrieval system