Oryzias melastigma (Indian medaka): 112153906
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Entry
112153906 CDS
T07439
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oml04054
]
112153906 (nlrc3)
Pattern recognition receptors [BR:
oml04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
112153906 (nlrc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
Ferritin_2
AAA_33
LRR_12
Motif
Other DBs
NCBI-GeneID:
112153906
NCBI-ProteinID:
XP_024140135
Ensembl:
ENSOMEG00000016416
LinkDB
All DBs
Position
LG19:9936690..9948779
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AA seq
1133 aa
AA seq
DB search
MERKHYDSILDRSKRIVWQDDCYIDLQSTSSSAALQARSEDLGWVQKYQNQLQRFLTKTF
LEDILTHLKKVDVLTLAEEAIIKEAGQLKDQATMLTTVLAGKESHGSDALQGFITSSSAP
VSQLILNYDSMVKKHKEVLLQQYEHYRERDSVSCSKLNTCSRTLLLIDGLSDLQQKEHDL
MQVGVTRGRKLNHLRQLGLAKLFEPLTRVSLPPRVSLTIGVSGIGKTTWVRHFIRQWSQG
AVCSDFHFVLPFTFSELNALEKLSADKLVKMAFPYLSDPSLVLSSPCRTLLIFDGLDEFR
CRLNFSDAVPCNDPKKEVSIDDLITNIIRGNLLPDVAVWVTSRPGVASLIPGGLVDRVSE
IPGFGPDDIQTFLNYHFSEKDFASKIWAHLQAHKILMVMCYIPCICWMTADTLLYILQSG
APESLPRTCTGLYAHFCCMKAELGEPRGREPIKTEQIHGNNRKLLGNIGRLAFYGLLKHK
YTFSEQDLKAYGIDLQLTQGSLGTGVLIRLESTIHTTYRFTHLALQEFLAATFYHVSSKR
AIFDLFSESTMSWPKIGFQNHFRSAFQHSQQAEDGHLDVFVRFLTGLLCPTAMKPVAGLL
AAGKDDGNQKVWAAGFLQGLMSSGEAVVSLRTVNLAYCLHELQQTELLRSVEEDLRQESL
AGKLTRPHCVVLGFLLHVSPECSDQTNLTGSLNYSTVKSLLPQLLYCSHLRLENNSFKDD
VMELLGSLLSAKDCHIQKISLADNAISNKGAKALSRALLVNRTLTCLNLRNNNIGSKGAK
FLAEALKMNQVLTSINFQNNSIEEEGAQALAEVLQCNRKLVSLNVRKNKIGAEGAKRIAD
ALKTNRTLTKLILCSNQLGDKGTVALAEALKLNQTLLSLQLQSNSISNRGMTALTKALRF
NHGLVTLNLRENSIGIEGAKNMAQALQENNSLQNLDLTANLLHDEGVQAISAAIKFNRGL
TSLHLQWNFIKSTAAKVLANALMTNATIKLLDLQENAIGNEGVIFLAEALKVNTSLQTLC
LQGVSAGTGGGVALAEALMKNQTLQTLDLRGNSVGMEGAKALANALKSNRSLKSLNLQEN
SLGMDGAIFIATALKGNHQLAYINLQGNGIGESGAKVISDAIRATALSCVVDI
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaaacattatgattctattctggaccgaagcaagcgaattgtctggcaagac
gactgctacattgacctgcagtccacgtcctcttctgccgctttacaagcaagatcggag
gatctgggctgggtccaaaaataccaaaaccagctgcagagatttctcaccaagactttt
ctggaggacatattgactcacctgaagaaggtggatgtgctgaccttagccgaagaggcc
atcatcaaggaagcgggccagttaaaggaccaggctaccatgctcacgactgttctcgcc
ggtaaggaaagccatggatctgatgcacttcaagggtttatcacgagctccagtgctccg
gtttcccagctcatcttaaactatgattccatggttaagaaacacaaggaggttttgttg
caacagtacgaacattacagagaaagagattcagtcagctgctccaaactgaacacgtgt
tcacgaaccctgctgctgattgatggactttcagacctccaacaaaaggagcatgacctg
atgcaggtgggagtgactcgaggaaggaaactcaatcatctcagacagttagggttggca
aaactgttcgagcccctgacacgggtcagcttgcctcccagagtctcccttacaattggg
gtgagcggcattggcaagacgacctgggtgcgacacttcatcagacagtggagtcaaggc
gccgtctgttcagatttccactttgtcttaccgtttacattcagtgaactgaacgcactg
gaaaaactgtctgccgacaaactagtcaaaatggcttttccttatttatcggatccgagt
ttggttctctcgagcccctgtcgcactctcctcatctttgatggtttggacgaattccga
tgcaggttgaatttctctgatgctgttccctgcaacgacccaaagaaagaagtgtccatc
gatgacttgataaccaacatcatccgagggaacctgctcccagacgtggcagtgtgggtg
acttccagaccaggagtggcttcgctcatccctggaggtttggtggacagagtctccgaa
attccaggattcggtcccgacgacatccaaaccttccttaactaccacttctcggagaag
gactttgccagcaaaatctgggctcacttgcaggctcataagatattgatggtgatgtgc
tacataccgtgcatttgctggatgacggcggatactttgctgtacatcttgcagagtgga
gcgccggagagtcttcccaggacttgcactggcttatacgcccatttttgctgcatgaaa
gcagaattaggcgagccgagaggcagggagcccataaaaacggagcagattcatgggaat
aaccgtaaactactggggaacattgggcggctggcattctatggactcttgaagcacaaa
tacaccttcagcgagcaggacctcaaggcttatgggatagatttacagttgacacaaggc
agtcttggtactggagtcctcatccggttggagtccaccatccacacgacatatcggttc
acgcatttggctctgcaggagtttcttgcagcgacgttctaccacgtttcctccaagaga
gccattttcgatctgttctcagagagcaccatgtcctggccaaaaatcggcttccagaac
catttccgaagtgcctttcagcactcgcaacaggctgaagacggtcacttggatgttttc
gtacgattcttgacgggccttctctgcccaacagcaatgaagcctgttgcggggcttctc
gctgcagggaaagatgatggcaaccagaaggtgtgggcagcggggtttttgcaaggcctc
atgtccagcggggaagctgtggtttcactgcgcacagtcaacttggcttattgcttgcac
gagctgcaacaaaccgagctgctgcggagtgtcgaggaggacttacggcaggaaagcttg
gcgggaaagctaactcggcctcactgtgtcgtcctggggttcctgctgcacgtgtctcca
gagtgcagcgaccagaccaacctcaccggctcgctaaactactcaacagtgaaaagcttg
ctcccacaactgctttactgcagccacctcagattggagaataatagcttcaaagatgat
gtcatggaactgctgggaagccttcttagtgcaaaggattgccacatccaaaaaataagt
ttggcagacaatgcaatcagcaacaagggagccaaagctctgagtcgagctcttctggtg
aatcgcacgttaacctgtctcaatctccggaacaacaacattggatctaaaggtgcaaag
ttcttggcagaggctctgaaaatgaatcaagttctgacatcaattaacttccagaacaac
agcatcgaggaggagggcgctcaggccctggcagaggtcctgcagtgcaatcgcaagctg
gtgtctctaaatgtgcggaaaaataaaattggggcagaaggagccaaaaggattgcagac
gcactgaagacgaaccgaactctaacaaagctgattctttgcagtaaccagctgggggac
aaaggaaccgtcgctctggcagaagctttaaaactcaaccaaactctgctctcactccaa
cttcaaagcaactcaatcagcaacagaggaatgacggcgctgaccaaagccctcaggttc
aaccacggtctagtgaccttgaatctcagagagaactcaattgggattgaaggagcaaag
aacatggcccaggccctgcaggagaacaactctctgcaaaatctggatctcacggccaac
ttgttacacgatgagggtgttcaggcgatttctgctgcaatcaagtttaatcggggactc
acctcactgcatctccagtggaatttcatcaagtccacagccgctaaagttttggccaac
gcactgatgaccaacgccactataaagctcttagatctgcaggaaaatgcaatcggaaat
gaaggtgtcatttttcttgccgaagctctaaaagtcaacacttcactgcagacgttatgt
cttcagggcgtctcggctgggaccggtggaggcgtggcgctggcagaagctctgatgaag
aatcaaactctgcagacattagatctccgtggaaacagtgtagggatggagggagcaaag
gctctggccaatgctttaaaaagcaacagaagtctgaagtccttgaatttgcaggagaac
tctttaggcatggatggagccattttcatcgcaacagctttgaaaggaaaccaccagctg
gcgtatatcaacctccaaggtaacggcattggagaatcaggagctaaggtcatctctgat
gctataagagccactgctctgagctgcgtggtggacatctag
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