KEGG   Oryzias melastigma (Indian medaka): 112153967
Entry
112153967         CDS       T07439                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein
  KO
K23625  ataxin 2/2L
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112153967 (atxn2l)
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112153967 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 112153967
NCBI-ProteinID: XP_024140233
Ensembl: ENSOMEG00000021118
UniProt: A0A3B3DYB8
LinkDB
Position
LG19:8494053..8507094
AA seq 1046 aa
MLKQQQQPGAGGRKTSNGTSGPGGMSSPVSGMNSGSRTPAGRNRASAKPSFQASPVFEGV
YNNARMLHFLTAVVGSTCDIRVKNGNAFQGIFKTLSSRCELAVDAVHKRSADDDGSTSAP
PRREDITETMIFSPSDLVTMICRDVDLNYATRDTFTDTAISSSRINGEHKEKVLQRWEGG
DSNGENYDLENDASNGWDANEMFRFNEVKYGVTSTYDSSLSMYTVPLERGNSENYRQREA
RAARLANEIESSPQYRHRVGLENDEGKTEEEKFSSVMRDGNDRERGRESPRDKERERGRD
SPGAGNREGKYIPLPQRHREMNRERGERGPGGPPPHSRLSGGYRSTPPSSSSSSPRPLPP
AAGPQPAGSPSERSSPLSGRSGAYGPHHPQGSPSPGPGSGPASPYTPASPGGPVQTPASA
SAATSPVSPPAPHGHAVPHSHSLPVALSDVGRPVNGVSPKAQRPPQTSRTSRTTNSHPGS
TASRSPKSGSSQDTPYLDTSSVSLPVQKTSGPAPLFPVDVNEILGAAAKERSAESHGNAE
DSKTTKAPSVQQRSQFEELRKFGKDFRLQSTGGNTTSPNSPAAPTPPVTDAAPSGAVKPS
ASDSHPAPEPKQQPSTASPSQPQPQPSPGPTEEHAKDATTTAGPAASNAATPLSERQSPS
TPQPARTPGSDDVRSDSGEQTEGVADQVKKSTLNPNAKEFNPLKTQMSMTKPNTAPTPPR
PTPPSPVVLPPQGPLYNTPYLSYVSHIQSVQPPPMYQYTMPVTQGKYRGNKGSVVPQRSD
HGTSAPAIMQAAASAAGAPLVASPYPQSYLQYNPQQYSQQQVIQAMTPYPGQPMYSMLQS
GARMISQGGGPHPQALGPPGGPQFQTQGDGPQGPQQGIYAPQSFTHHSGAVHQPQPSSTP
TGNQPPPQHAAPSPGQNAQSGPQPQSLYHSGPLSAPTPPNMPPGHTSPQGSYPIQGYSIH
SHQGIPPTYPLGQIAQAHVQGAMSGHHSGSHGQPQLVMLQPQQGPGGVPQHPQHGPQQGA
HQHFYIGHPQAMQVQTHPASFHPPGN
NT seq 3141 nt   +upstreamnt  +downstreamnt
atgctaaaacaacagcagcagcctggcgcaggcgggagaaaaacgtctaacggaacgtcg
ggccccggcggtatgtcttcgccagtcagcgggatgaacagcggcagcaggacacccgct
ggaaggaaccgagcttctgcaaagccatcattccaggcatctcctgtctttgaaggagtc
tacaacaatgccagaatgcttcatttcctcacagctgtagtgggatccacctgtgacata
agagtgaagaatgggaatgcttttcaaggcatcttcaagactctcagctctcggtgcgag
ttggctgtggatgccgttcacaaacgcagtgctgatgatgacggctcgacctcagctcca
ccacggcgggaggacatcacagagacgatgatcttcagcccctctgatctagttacaatg
atctgcagggatgtggaccttaactatgccaccagagacacttttacagacacagccatc
agctccagccgcatcaacggagaacacaaagagaaagttttacagagatgggagggagga
gacagcaacggagagaattacgatctggaaaatgatgcttctaacggctgggacgccaac
gagatgtttcgtttcaatgaagtgaaatatggcgtcacgtcgacgtacgactccagcctc
tccatgtatactgttcccttggagagggggaactccgagaactatcggcaaagggaggca
cgagccgcccggctggccaacgagatcgagtcgagcccccagtaccgtcaccgcgtgggc
ctggaaaacgatgaaggcaaaaccgaagaagagaagttcagttctgtgatgagagacggc
aacgatcgggagcgaggccgcgagagtccccgcgacaaagagcgggaaagaggccgagac
agtcctggagccggcaacagagagggcaaatacattccattacctcaaagacaccgagag
atgaaccgagagcgaggagagaggggtccagggggaccccccccacacagccgactgagc
ggaggttaccgctccacccctccatcgtcctcgtcttcatcgcccagaccgttaccgcct
gccgccgggcctcagcccgcaggctccccgtcagagagaagcagccccctgtcaggacgc
agcggagcttacggtccccaccacccacagggaagccccagcccaggcccgggttctggt
cccgccagtccctacacacccgcctctcctggtggaccggtacaaactccagcttctgct
tctgcggcaacatcccccgtcagcccgcctgctccacacggtcatgcagtccctcattcc
cactccctcccagtcgctctctctgatgtgggccggccagtcaacggggtttccccaaaa
gcccaaagacctccacagacgagtaggacaagccgcaccacaaactcacaccccgggtcc
acagcctctcgatccccaaaatccggctcttcccaggacacgccttacctggacacatca
tctgtatctctgcctgtccagaaaacatccggccccgctcccctcttccccgtagatgtg
aatgagattctcggcgccgctgcaaaggagcgctcagcggaaagtcacggcaacgcagag
gacagcaagaccactaaagctccctcagttcagcaaagatcccagtttgaagagctgcgg
aaatttggcaaagacttcagactccaatcgactggaggcaacaccacttccccaaattct
ccagcagcaccaactcctcccgtcaccgacgccgcgccgtctggcgccgtcaaaccctct
gcgtccgactctcacccggcacccgagcccaaacagcagccttcaaccgccagtccctcc
cagcctcagccccagccgtcaccgggtcccacagaggagcacgccaaggacgccacaacc
acagcgggtcctgcagcgtccaacgcagccaccccgctttcagaacgccaatccccgtcc
accccgcagccggccaggaccccggggagcgacgacgttcgctccgactcgggggagcag
acggaaggcgtagccgatcaagtcaaaaaatcaactttgaacccgaatgctaaagagttc
aacccgctcaaaactcagatgtctatgacaaaacccaacacggcacccaccccacctcga
ccaactcctccaagcccggtggttctgcccccgcaggggcccctctacaacaccccttac
ctctcctacgtgtcccacatccagtctgtgcagccaccaccaatgtaccagtacaccatg
ccagtcacccagggaaaataccgtgggaacaaaggctcggtggtgccccagcggtccgat
catggtacttcagctccggcaataatgcaagctgctgcatcagcagctggagctcctctg
gtggcgtcgccctaccctcagtcctaccttcagtacaacccacagcagtacagccagcag
caggtcatccaagccatgaccccctaccctggacagccgatgtactccatgctacaaagt
ggagccaggatgataagtcaaggtggtggcccccaccctcaagccctcggcccacccgga
ggtcctcagttccagacacagggagatggacctcaagggccgcagcaaggcatttatgct
ccacagtcctttacgcatcactcaggagcagttcatcagcctcaaccctccagtactccg
acaggcaaccagcccccaccgcagcatgcagcccccagcccgggacagaacgcccagtca
ggcccccaacctcagtctttataccactctggtccactgtcggccccgaccccacccaac
atgcctcccggccacacctctccacagggctcctaccccatccagggctacagcatccac
agccaccaaggcatcccacccacctaccctctggggcagatcgcgcaggcccatgttcaa
ggagccatgtcaggtcaccactcagggagtcatggccaaccccagttagtgatgctgcag
cctcagcagggtcctggaggagtgcctcagcacccccagcatggcccccagcaaggagca
caccagcacttttacataggacatccacaagcgatgcaggtccaaacacaccccgcttcg
ttccatccccccggcaactaa

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