Oryzias melastigma (Indian medaka): 112153986
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Entry
112153986 CDS
T07439
Symbol
atrnl1b
Name
(RefSeq) attractin-like protein 1
KO
K24332
attractin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
oml04091
]
112153986 (atrnl1b)
Lectins [BR:
oml04091
]
C-Type lectins
Others
112153986 (atrnl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_5
Kelch_4
Kelch_6
Kelch_3
EGF_LMN_ATRN
Kelch_2
Lectin_C
CUB
NANM
PSI
EGF_TEN
EGF_Teneurin
EGF_laminin
TMEM100
EGF_2
PSI_integrin
RecR_ZnF
Motif
Other DBs
NCBI-GeneID:
112153986
NCBI-ProteinID:
XP_024140267
Ensembl:
ENSOMEG00000023542
LinkDB
All DBs
Position
LG19:6457221..6529042
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AA seq
1372 aa
AA seq
DB search
MDPKGKYKTTLFMFGPKPATHGDPRRVSRYLLVYVLFYFVLFTHASPAKPCDKSCFSGKC
LNGSCVCERGWVGELCQHCQGRFKLTEPSGYLTDGPINYKYKTKCTWLIEGYPNAVLRLR
FNHFATECSWDHMYVYDGDSVYAPLVAVFSGLIVPERRGNETVPEVEATSGYALLHFFSD
AAYNLTGFEIFYSINSCPNNCSGHGKCTPGNSAVSRVYCECEKYWKGEACDIPYCRNNCG
SPDHGYCDLTGEKLCVCNDSWQGPDCSLTVPSTESYWVLPSVKPFGTSFARASHKAVVQD
KVMWVVGGYTFNYSSFHMILNYNLESGVWTTVPIGSGPVPRYGHSLAAHQDDIYMFGGKL
EAGLSNVTDELWVFNIPNRTWQRRNPVVGSLPQVQVYAVEGHTAHCVPLDSGDTVMLVIF
GHSPIYSYISYVQEYNLRTNTWSVPETKGAVPLGSYGHSSTHHGGSVYVHGGYKALPNSK
FGLVDDLYRYDVNTRTWFILKESGFPRYLHSTVLLSGTLLVFGGNTHNDTSLSNGAKCFS
ADFLAYDIACDEWKLLPKPDLHRDVNRFGHSAVVSNGSMYVFGGFSGVLLNDVLVYRPLS
CQAFSAEEGCLKAGPGVRCVWSRGRCVPWEPSSPKPPPLCPLKPASVDEWCFKFSDCSSC
TENTVGCQWCDDKKCISATSNCTSGVTNFTACPVRSEQTCSKFANCNLCLLNLNCHWEQN
LSKCQSMPAQQCSEGWSQVGEACLRINSSRESYDNAQHYCKNLNGNIASLTTNKQVDFVL
QELKKLQQQEKRLFPWVGLRKINVSYWGWEDMSPFTNSSLRWQPGEPNDSGFCAYLEEPQ
ISGLKANPCTATANGLICEKAIGNSNQNSRPSCKKPCSLHTNCSNCTSQGTECMWCSSTQ
RCVDSSAYVISFPYGQCLEWQTGDCIAQNCSGLQTCSQCLEQPECGWCGDPSSTGKGLCM
EGSYRGPVKRALKAGQQSPTHDVTLEPGSCPKEKGFDWSFIHCPACQCNGHSTCVNGSMC
EQCRNLTTGPHCETCMPGYHGDPTNGGKCQACKCNGHASVCQVLTGKCFCTTKGIKGDQC
QLCDSENRYLGNPLRGTCYYNLLIDYQFTFSLIQEDDNHYTAINFMASPEQANKNLDMSI
NASNNFNLNITWSVGSTAGTISGEEVHIVSKTNIKEYRDSFSCEKFTFRSNPNITFYVYV
SNFSWPIKIQIAFSQHNSIMDLVQFFVTFFSCFLSLLLVAAVVWKIKQTCWASRRREQLM
RERQQMASRPFASVAVSLEARGELTEMLLPVVDGAPKPVAVEPCSGGKAAVLTVLMHLPS
GLSALPPPGQSGIIVASALIDISQQKTSDFKDKSQSLKNRKALPPAHQGTCV
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggatcctaaagggaaatataagactacacttttcatgttcggacccaaaccggccacc
cacggcgacccgcggagagtcagccggtacttgctggtctatgttctgttctacttcgtc
ctgttcactcacgcctccccggccaagccgtgcgacaagagctgcttctcggggaaatgc
ctcaacgggtcctgcgtctgcgagcgaggatgggtgggagagctgtgccagcactgccag
ggcaggttcaagctgaccgaaccatcaggatacctcacagacggtcccatcaactacaag
tacaaaacaaagtgcacatggttaatagaaggctaccccaacgccgtgttacggctacgc
ttcaaccactttgctaccgagtgcagttgggaccacatgtacgtctacgacggcgactcc
gtttatgctccgctggtggctgttttcagcggcctcatcgttccagagcgccgaggtaac
gagacggttcctgaagtcgaggcgacttccggctacgcgctgctgcactttttcagcgat
gctgcctacaacctaaccggatttgaaatattttactcgatcaactcttgtccaaataac
tgttccggacacggcaagtgcaccccgggtaactctgccgtcagcagagtctactgcgag
tgtgagaagtactggaaaggcgaggcctgtgacatcccctactgcaggaacaactgcggg
agccccgaccacggctactgtgacctcacaggggagaagctgtgcgtctgcaacgacagc
tggcaaggtccagattgctctctaacggtaccgtccaccgagtcctattgggtcctcccc
agcgtcaaaccctttggcacctcattcgccagagcttcccataaggccgtggtgcaggac
aaggtcatgtgggtcgtgggcggatacacgttcaactacagttccttccatatgatcctc
aactacaacctggagagtggagtctggaccacagttcccatcgggagtggacctgtgcca
agatatggccactcactcgcagcacatcaggatgacatctacatgttcggggggaaactg
gaggccggcttgagcaacgtcacggacgagctgtgggtgttcaacattcccaaccggacg
tggcagaggaggaaccccgtcgtcggctcgctgccacaagttcaggtctacgccgtggag
ggacacacggcccactgcgtcccgctggacagcggcgacacggtcatgctggtcatcttt
ggccactcccccatctacagctacattagctacgtccaggagtacaacctgcggaccaac
acatggtccgtgcctgagacgaaaggcgccgttcctctgggaagttacggccacagcagc
acgcaccacggcggcagcgtctacgttcacggcggctacaaagctctgcccaacagcaag
tttggcctcgtggatgacctgtacagatacgacgtcaacacgcggacatggttcatcttg
aaggagagcggctttccgcgctacctgcactccactgtgctcctcagtggaactctgctg
gtttttggtggcaacacgcacaacgacacgtcactgagcaacggggccaagtgtttctct
gcagacttccttgcttatgacattgcctgtgatgagtggaagctcctcccaaagccagac
ctgcaccgagatgtcaaccgcttcggtcattcggctgtggtcagcaatgggtccatgtac
gtgtttgggggtttctcaggcgtgctgctcaacgacgttcttgtttaccggcctctcagc
tgccaggccttctctgcagaggagggctgcctgaaggctggaccgggggtccgctgcgtc
tggagcaggggccgctgtgtcccgtgggaacccagcagccccaagccaccgcctctctgc
cctcttaagcccgcctcagtggatgagtggtgcttcaagttctcagactgcagcagctgc
acagaaaacaccgtcggctgccagtggtgcgacgacaaaaagtgcatttctgccaccagc
aactgcacctccggcgtgaccaacttcaccgcatgtccagtgaggagcgagcagacatgc
agcaagtttgccaactgcaacctctgcttactaaatcttaactgtcactgggagcagaat
ctatcaaagtgccaatccatgcctgcccagcagtgcagcgagggctggagtcaggtggga
gaggcctgcctgaggatcaactccagccgcgagagctacgacaacgcccagcactactgc
aagaacctgaatgggaacatcgcctcgctcaccaccaacaaacaggtggactttgtgctg
caggagctcaagaagctgcagcaacaggagaagcggctgtttccatgggtggggctaagg
aagatcaacgtgtcgtattggggctgggaggacatgtctcccttcaccaacagcagcctg
cgctggcagcccggagagcccaacgactccggtttctgtgcctacctggaggagcctcag
atttcaggcctgaaggccaacccatgcaccgccaccgccaacggcctcatctgtgaaaaa
gccatcggaaactccaaccagaacagccgtccgtcctgtaaaaagccctgctcgctgcac
accaactgcagcaactgcaccagccagggcacggagtgcatgtggtgcagcagcacgcag
cgctgcgtggactcctctgcctatgtcatatccttcccctacggccagtgtctggagtgg
caaacgggagattgtattgcccagaactgctcaggactgcagacgtgctcccagtgcttg
gagcagcccgagtgcggctggtgcggcgatcccagcagcacggggaaaggcctgtgcatg
gagggctcctaccgaggccccgtgaagagagcgctgaaggcgggccagcagagcccgacc
cacgacgtcaccctggagcccggcagctgccccaaagagaagggcttcgattggtctttc
atacactgccccgcgtgccagtgtaacggccacagcacgtgcgtgaacggcagcatgtgc
gagcagtgccgcaacctgaccactggcccccactgtgagacgtgcatgcccggttaccat
ggagatcccactaacggcggcaaatgccaagcttgtaagtgcaatggtcacgcgagcgtg
tgccaggtgttaactggcaaatgtttctgcaccacgaaggggatcaaaggcgaccagtgc
cagctatgtgactcagagaaccgttaccttggcaatccgctgagaggaacctgttactac
aatttgttgatcgactaccagttcacattcagcctcatccaagaagatgataatcactac
actgctatcaatttcatggcctcacctgaacaggcaaacaagaacttggacatgtccatc
aacgcgtccaacaacttcaacctcaacatcacatggtcagtggggtcgacagctggaacc
atctctggtgaggaggtgcacattgtgtccaaaaccaacataaaggagtacagagacagt
ttctcctgtgagaaattcaccttcagaagcaaccccaacatcaccttctacgtatacgtc
agcaacttctcctggcctatcaagatccagattgctttctcccaacacaacagcatcatg
gacctggtccagttctttgtgacgtttttcagctgtttcctttcgctcctgctggtggcg
gctgtggtgtggaagatcaaacagacctgctgggcatctcgacgcagagaacagctgatg
agagagcgccagcagatggccagtcgtcctttcgcctctgtcgccgtttcactggaagcc
agaggagagctgaccgaaatgttgctgcctgtagttgacggagctcctaaaccggttgcc
gtggagccgtgttctggagggaaagcagctgtgctgaccgtgctcatgcacctgccctct
ggactttcagctttaccgccgccgggacagtcagggatcatcgtagccagtgcgctgata
gacatttcccagcagaagacctccgattttaaggacaagtcccagtctttgaagaaccga
aaagctcttcctccggcgcaccaggggacctgcgtctga
DBGET
integrated database retrieval system