Oryzias melastigma (Indian medaka): 112153989
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Entry
112153989 CDS
T07439
Name
(RefSeq) PH and SEC7 domain-containing protein 1
KO
K12494
PH and SEC7 domain-containing protein
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112153989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112153989
Membrane trafficking [BR:
oml04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112153989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
HTH_AT3G52170
Motif
Other DBs
NCBI-GeneID:
112153989
NCBI-ProteinID:
XP_024140270
Ensembl:
ENSOMEG00000003008
UniProt:
A0A3B3BA86
LinkDB
All DBs
Position
LG19:complement(19269406..19402410)
Genome browser
AA seq
1548 aa
AA seq
DB search
MSQPEKVLHLFVEVRSAPDQNGDGEEGTAQGLSNQSSPTKLSFQLTGQTTISRTSAAHDL
LQNRTPSRNSVNFQLPQTSSSPGLTEKWSSPTYGRGGAHTPPDGKRSVVTFSYVEKSNVK
TVDSPRSSMCRRRAAEEEVSRLHKRFSDPVGFGSPDSSCSSSPKLTFQSPESHQQRFSPS
FCRPHCDAIGRAATQRAVEEFGSPLLRIKLAHALEHTSSYRYNQQPRCQSWSGSPVQSQN
SSVTSKDHIKGRNQNIYGLHQAPDQLSTPSWVSSRSRLWSCPDSNTPFHWVKEQKGMAGS
PATKRHIQRSTSPQGGIPQLGNNGVEGLNQLSESKFSSPAHGSEVTKKLAEEPSKASSVS
TKTSSYSSHNALDEHPNNSGEPAPNAQELKQTVKMNIPLNDQHVPESEATVTDRHQEDSR
HGSPALPSRVFRPSHPPTEISSPVRDPRLSQAELRAPDTPTLHRCRPPQYTGDSWSSSVD
RKEDQSSFEREDCTELARRLFINQSVDEAPVSWTSRQQWRSQTKNNPEPGSELSCDRTEK
PAKRRQPLSPTAQQKRAEQRRREILLLGPVALDSAEEDEGCNDDEEQGREAEGSKSGGLP
HREEEQNGGMGGSSSRSSSGVTGSLGDPGSVSPESSQSSHQSNETGAATSGIQTDSGSAA
PTPSLHCQKIARAKWEFLFGTSAEYAAGRGDKHCLEASTAPPSGTSSESPTPTPPSSLPL
ISANHEVQHVEVELVTPPPAVTGISPKTGIIRRTLKYSETDLDAIPLRCYRETDIDELLQ
GEQDDADSAFGSNRSVQGTSGAGSSPLGGLGYGRTDGQSDMKGGEEEEEEEEDEEEEMVS
WASVRMQGDSRKQQYAAEEEPEVFGHLMRPVKTFFDNHNPAFKSPVLVSGPRCSAEDTFS
RHFESIMESHRAKGTSYNSLDSEELLTSSAQTVLTFDLPTLTPAIHAPVCQSARQIVQLS
FAPLAHDERPSLSDSVFTVTGDSDATRAPSSERLSSVSEDALARGQEGSQLGSSWYVNTS
YSLPSRDKARLATDSELEQDLSDRLGLSSSDTLTNGSHRADVAAAKRLAKRLYNLEGFRK
SDVSRHLSKNNDFSQTVAEEYLSFFNFAGLTLDQALRTFLRQFALMGETQERERVLSHFS
RRYMISNPGVMPSEDAVHTLTCALMLLNTDLHGQNVGKRMSCTQFIGNLEGLNNGQDFPK
DQLKALYNSIKNQKLQWTLDEEELRKSFSELGDSLCESDTSKSMKRVSSSGKSLSDGTPS
TGTLLYKNGFLVRKVHADSDGKRTPRGRRGWKTFYAILKGLILYLQKGEYRPDKQLSDED
LKNAVSIHHSLAMKASDYSKRPNVFYLRTADWRVYLFQAPNAEQMQSWITRINTVAALFS
APPFPAAIGSQKKFSRPLLPGTMSKLSEEEQIRSHEARFRAISTDLAELRSYPPDRKVKG
RELEEYRQRDEYLDFEKTRYGTYIMLLRAKIRSGEEDLALFESLLLEDSSLQRAHSSPTL
QDSSQASQISQMSSFRDGANSSKASGCSSSSKPRQEGQRHSYRQAVKK
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcctgaaaaagtccttcatcttttcgtggaagtgaggtctgccccagatcag
aatggagacggtgaagagggcacagcccaggggctttccaatcagagcagccccacaaag
ctcagctttcagctaacgggccagaccaccatcagcaggacctcagcagctcacgacctg
cttcagaaccgcacaccctccagaaacagcgtcaactttcagcttccacaaaccagcagc
tctcccggactcactgagaagtggagttcccccacctatggacggggcggggcgcacacc
ccgcctgatgggaagcgctctgtggttaccttcagttatgttgagaagtctaatgtgaag
accgtggacagtcctcggagctccatgtgcagaagacgagccgcagaggaagaggtttcc
cgtcttcacaaacgcttcagcgatccggtggggtttggaagtcctgattcgtcgtgcagc
tccagcccaaaactgaccttccagtctccagaaagtcaccagcagaggttttcccccagc
ttttgccggccacattgtgatgccatcggcagggcagctacgcagagggcagtggaggag
tttggttcccccctactgaggatcaaactggcccacgccctcgagcacacctcatcctac
aggtacaaccagcagccacgctgtcagtcctggtctggatctcctgttcagagtcagaat
tccagcgttacctccaaagaccacattaagggcaggaaccagaacatttacgggttacat
caggccccagaccagctgtcgactccatcctgggtgtcttctcgatcaagactttggtca
tgtcccgattctaacaccccctttcactgggtgaaagagcaaaaaggtatggcaggaagt
ccggctaccaaaaggcacattcagagaagcacctcgccacagggaggaatccctcaactt
ggcaataatggcgttgagggcttaaatcagttgagcgagagcaaattctccagtccggct
cacggctcagaagtaaccaaaaagttagcagaggagccgtcaaaagcgtcttctgtttca
acaaagacgagcagctactcatcgcacaatgctttagacgagcatccgaacaactctgga
gaaccagctccaaatgcacaagagttgaagcaaaccgttaaaatgaacatccctttaaac
gaccaacatgtgccagaaagtgaggcgacagtgactgacaggcatcaggaggacagccgc
cacggctcccccgccctgccttctcgagtcttccggccgtctcaccctcccaccgagatc
agctcgcccgtcagggaccccaggctttcccaagcagagctccgagcgccggacactccc
actctgcatcgctgtcgacccccacaatacaccggcgactcctggtcctccagcgtggac
aggaaagaagaccaaagctcctttgagagggaggactgcacagaacttgctcgccggctt
ttcatcaatcagagtgtagacgaagcgccggtcagctggacgtcccggcagcagtggagg
agccaaacaaagaacaacccggagcccggatctgagctcagctgtgacagaacggaaaaa
cccgccaaacggcggcagccgctaagccccacagcccagcagaagcgggccgagcagaga
cggagggaaatcctccttcttggacccgtggctctggactctgcagaggaggacgagggc
tgcaatgatgacgaagagcaaggcagggaggcagaggggagcaaatcaggaggactccct
caccgagaggaggagcagaatggagggatgggaggttcgtcctcacggagttctagtggg
gtgacggggagtttaggggatccaggatccgtgtccccagagtccagtcagtccagtcac
cagagcaacgagaccggggcggccacctcaggaatacagacggacagtggaagtgcagcc
cctacgccgtcactgcactgtcagaagatcgcacgcgccaagtgggagtttttgttcggg
acctctgctgagtacgctgccggcagaggggacaaacattgtctggaagcctccacagct
cctcccagtgggacctccagtgagtcccccaccccgacgcctccatcctctctgcctctg
atctcagccaatcacgaggtgcagcacgtggaggtggagctggtgactccgccccccgct
gtcactggaatctccccaaagaccggcatcattcgccggacgttgaagtactcggagacc
gacctggacgccatcccgctccgctgctaccgcgagacggacatcgacgagctgctgcag
ggcgagcaggacgacgccgactccgccttcggcagcaaccgcagcgttcagggcacctcg
ggggccggcagcagccccctgggggggctgggttatggcaggacagatgggcagtcagac
atgaagggaggagaggaggaggaagaggaggaagaggatgaggaggaggaaatggtgagc
tgggcaagcgtgagaatgcaaggagacagcaggaagcagcagtatgcagcggaggaggag
ccagaggtgtttggacacctgatgagacctgtgaagactttctttgacaaccacaacccg
gccttcaagtccccggtcctggtctccggtccgcggtgttccgcagaagacacgttcagc
cgccactttgagagcatcatggagtcccaccgagccaaagggacgtcctacaacagcctg
gacagcgaggagctgctgacctccagcgctcagaccgtcttgacctttgacctacccacg
ctcacacccgccatccacgcgccggtgtgccagagcgccaggcagatcgtccagctcagc
ttcgccccgctggcgcacgacgagaggcccagcctctccgattcggtcttcaccgtgacg
ggagactcggacgccacgcgtgcgccctccagcgagcggctgagcagcgtctcggaggac
gcgctggcaagagggcaggaggggtcacagctggggagcagctggtacgtcaacacctcc
tactctctacccagcagagacaaggctcgtctggcgacagactctgagctggagcaggac
ctgagcgatcgtctcgggttgagcagcagcgacactctcaccaatggcagccatcgagcg
gatgtggccgcggcaaagcgtctggccaaacgcctttacaacctggagggcttcagaaag
tcagacgtgtctcgtcatctcagcaagaataacgatttcagccaaacagttgcagaggag
tacctgagcttcttcaacttcgctggcctcactcttgaccaggcactgcggactttcctc
cggcagtttgccctgatgggagagactcaggagagggaaagggttttgtcacacttctcc
aggcgttacatgatctccaacccaggagtgatgccatcagaggatgcagttcacactcta
acttgtgcgctgatgctcctaaacacggatctgcacggccagaacgttggcaagaggatg
tcatgcacgcagttcatcgggaacctggaaggactgaacaatggccaagactttcccaaa
gaccagctcaaagcgctttacaactcaattaagaatcagaagctgcagtggacactggat
gaagaggagctgcggaagtcgttttcagagctcggggacagcctgtgtgagtccgacacg
tccaaatcgatgaagcgggtgagcagcagtggaaagtctctgtccgacgggacgccgtcc
accggaacgctgctgtacaaaaacggcttcctggttcggaaggtccatgctgactcagat
ggaaaaagaacaccacgtgggagaagaggctggaaaacgttctatgccatcctcaaagga
ctaattctttatctgcaaaaaggggagtaccggcctgataagcagctctctgatgaggac
ctgaagaacgccgtgtccatccatcactctctagcaatgaaggcgtccgactatagcaag
agacccaacgtcttctacctgcggaccgctgactggagggtgtacctcttccaggcaccg
aacgctgagcagatgcagtcctggatcacacggatcaacacagtggcagccctgttttcc
gcccctcccttccctgcagccattggctcccagaagaagttcagccggcctctgctgcca
ggaacaatgtccaaactgtctgaggaggaacagatcagatcccatgaagctcggttcaga
gccatctccactgacctggcagagctacgctcctaccctcctgatcgcaaggtcaaaggg
cgagagctggaggaataccgccaaagagacgagtacctggactttgagaaaacgcgatac
gggacctacatcatgctgttgcgggcgaagatcagaagtggtgaggaggacctggctttg
tttgagtctcttctgctggaggacagtagcctgcagagggcgcactccagccccacgctt
caggacagtagtcaggccagccagatcagtcagatgagcagcttccgggacggcgccaac
agcagcaaagcgagcggctgcagcagcagcagcaagcctcgacaggagggccagagacac
agctacagacaagctgtcaagaagtga
DBGET
integrated database retrieval system
