Oryzias melastigma (Indian medaka): 112154016
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Entry
112154016 CDS
T07439
Name
(RefSeq) SPRY domain-containing SOCS box protein 3
KO
K10345
SPRY domain-containing SOCS box protein 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112154016
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
112154016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
SOCS_box
Motif
Other DBs
NCBI-GeneID:
112154016
NCBI-ProteinID:
XP_024140323
Ensembl:
ENSOMEG00000000433
LinkDB
All DBs
Position
LG19:9588119..9593668
Genome browser
AA seq
423 aa
AA seq
DB search
MLRKGRNSRGQHLVWSETQQDADVMTDVKMSDREEWDQQLVTEISDLESEVDYLAGSQTA
SDVVALPSTPPLLGENFYSYKPQEELNLAFGLSSEDLCEDEDHILDWVWDEQYKSSGAFL
SGDSRKVSFHSDYSCGTAAIRGHKELSEGQHYWEVKMTSPVYGTDMMVGIGTSEVNLDKF
KYSFGSLLGHDEDSWGLSYTGLLQHKGDKVKFSPRFGQGSIIGVHLDTWHGTLSFYHNRQ
FIGVAATNLQNKKFYPMVCSTAAKSSMKVVRACYTPTSLQYLCCARLRRMLPCCPDVVGA
LELPPGLRTLLQTQLFWIFSVTSSTSERETHSQEDAQEEEEGSLPPSPVPSSTSSPASTM
SACSSPGPYSETLSETDVYLCPCHMAPQTERGACRCPPTPPSSDYDSCCSEPEDYQCKRC
RWT
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggaagggcaggaacagcagaggccagcatttggtctggagtgagacgcagcag
gacgcggatgtcatgacagacgtcaagatgtccgacagagaagaatgggaccagcaactg
gtgacggagatcagtgacttggagtcagaggtggattatttggcgggatcgcagactgct
tcagacgtagtggctttgcccagcactcctccactgctgggggagaatttctactcctac
aaaccacaggaagagctcaatctggcgtttggccttagcagtgaagacctctgtgaagac
gaggatcacattttggattgggtttgggacgagcagtacaagtcctctggagccttcctg
agcggagacagcagaaaagtgagctttcactccgactacagctgtgggaccgctgccatc
cgcggccacaaggagctttccgaaggccagcactactgggaagtgaagatgacgtctccg
gtctacggcacagatatgatggtggggatcggaacttctgaggtgaacctggataagttc
aagtacagctttggcagcctgctgggccatgatgaagacagctggggtctctcctacaca
ggtctgcttcaacacaaaggggacaaagtgaaattctcccctcggtttggtcaggggtcc
atcataggagtgcacttggacacgtggcacggcactttgagcttttaccacaaccgacag
ttcataggtgttgctgctaccaacctgcagaataagaagttctaccccatggtgtgctcc
acagcagctaagagcagcatgaaggtggtccgtgcctgctacactcccacctccctgcag
tacctctgctgcgcccgcctgcgccgaatgttaccctgctgccccgacgtagtcggtgct
ctagaactgccccccggcctgcgcaccctcctccaaacacagcttttctggatcttcagc
gtcaccagcagcacctcagagcgggagacacactcgcaggaggacgcccaggaggaggag
gagggcagcctcccgccaagccccgtcccgagctccacctccagccccgcgtccacaatg
agtgcctgctcctcgcccggcccctactccgaaaccctttcagaaacggacgtgtatctg
tgcccgtgtcacatggcacctcagactgagcgcggcgcctgccgctgccccccgactccc
cccagcagcgactacgacagctgctgctcggagcccgaggactatcagtgcaagagatgc
cgctggacatga
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