Oryzias melastigma (Indian medaka): 112154020
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Entry
112154020 CDS
T07439
Symbol
tcf7l2
Name
(RefSeq) transcription factor 7-like 2 isoform X1
KO
K04491
transcription factor 7-like 2
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04310
Wnt signaling pathway
oml04520
Adherens junction
oml04916
Melanogenesis
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112154020 (tcf7l2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112154020 (tcf7l2)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
112154020 (tcf7l2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112154020 (tcf7l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112154020 (tcf7l2)
Transcription factors [BR:
oml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
112154020 (tcf7l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
112154020
NCBI-ProteinID:
XP_024140328
Ensembl:
ENSOMEG00000014652
LinkDB
All DBs
Position
LG19:complement(10628143..10716038)
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AA seq
633 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMISFKDEGEQEEKISENSSAERDLADVKSSLVNESETNQNSSS
DSEAERRPPPRSETFRDKTRESLEEAAKRQDGGLFKSPPYPGYPFIMIPDLTSPYLPNGS
LSPTARTYLQMKWPLLDVQPGGLQSRQALKDARSPSPAHIVGPFCWEFPGQSDLSLHQFH
LSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLQTDVDPKTGIPRPPHPPDISPYY
PLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSSLLSSRFPPHMV
PPHHSLHTTGIPHPAIVTPNVKQESSHSDISSLNSSKQSDAKKEEEKKKQVHIKKPLNAF
MLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW
SARDNYAANQQGKRKKRKREKQQAESNEHREYFPNPCLSLPPITDLSAPKKCRARFGLDQ
QNNWCGPCRRKKKCIRYIQGEGSCASPPSTDGSLLDSPPSSPSSVVPSPSSKESKPQTEQ
MQPLSLTMKPAHQPLHHPHLLAGPPLVQLENSAAAGKTPAASSHNGALERADVSSSRQPG
SSMARPSAALCHSRSLHPSAAPQPLSLVTKSIE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctcaacggcggtggaggggacgacctgggcgcaaacgatgaaatgatttcc
ttcaaagacgaaggggagcaggaagagaaaatttcggagaactcctcggcagaaagggat
ttagcagatgtcaaatcttcactcgtgaacgagtcggaaacgaatcaaaacagctcgtcg
gattcggaggcggaaagacggcctccgcctagatctgaaactttcagagacaaaacaaga
gaaagtttagaggaggctgcgaaaaggcaagatggagggctgttcaagagcccaccgtac
ccgggctatccgtttataatgatccccgatctcacaagcccctaccttcccaatggatca
ctttctccgacagcacgcacatatctacagatgaaatggcccctgctagatgttcaacca
ggaggtcttcagagtagacaagcacttaaagatgccaggtccccgtcaccggcacacatt
gttgggcccttctgctgggaattccccggacagtcagatctgagccttcaccaatttcat
ttgtctaataaggttccagtggtacagcacccccaccatgtgcaccctctcacgcctctg
atcacctacagcaatgagcacttcacaccggggaaccccccacctcacctacagacagac
gtggatcccaaaacaggaattccgaggcctccgcatccccctgatatatctccctattac
cctctttcacctggcactgttggccagatcccccatccgctaggatggttagtaccacag
caaggtcaacctgtttatccaatcacaacagggggtttcagacacccatacccaactgcg
ctcactgtcaacgcatccatgtcaagtcttctgtcctccaggttccccccacacatggtg
ccccctcaccacagtttgcacaccacaggcatcccacacccagccatcgtcacacccaac
gtcaagcaggaatcctcccatagtgacattagctccctcaacagctcgaaacagtcagat
gccaagaaggaggaggagaagaagaagcaggtccacataaagaagcctctgaacgccttc
atgctctacatgaaggagatgcgggcgaaggtggtggcggagtgcacgctgaaagaaagc
gctgccatcaaccagattctggggagaaggtggcacgccctatcgcgggaggagcaggcc
aagtactatgagctggccaggaaagaacgacagctccacatgcagctgtacccgggctgg
tcagcacgagacaactatgcggctaaccaacaggggaaaaggaagaagagaaaaagggaa
aagcagcaagcagagagcaatgaacacagagaatattttccaaacccttgcctttcactt
cctccgattacagacctgagcgctcctaagaagtgtcgagcgcgctttgggctcgaccaa
cagaataactggtgtggcccgtgcaggagaaaaaaaaagtgcattcgctacatccaaggt
gaaggcagctgtgccagtcctccctctacggacggaagcttactagactcccccccatcc
tctccttcctcagtggttccctccccctcctcaaaagagtccaaacctcagactgaacaa
atgcaacctctctcactgactatgaaaccggcccaccagccactccaccacccgcacctc
ctggctgggccgcctttggttcaactggaaaactctgcggcagccggcaaaacgcccgcc
gcctcctcccacaacggagctctggagcgcgccgacgtctcgtcctcgcggcagccgggc
tcctcgatggcccggccctcggcagcgctgtgtcattcccgctcgctccacccctccgca
gccccccagcctctatcgctagtgaccaagtctatagaatag
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integrated database retrieval system
