Oryzias melastigma (Indian medaka): 112154024
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Entry
112154024 CDS
T07439
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112154024 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112154024 (vti1a)
Membrane trafficking [BR:
oml04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
112154024 (vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec8_N
Sec20
Mer2
BPS1
Laminin_II
DUF1664
Motif
Other DBs
NCBI-GeneID:
112154024
NCBI-ProteinID:
XP_024140356
Ensembl:
ENSOMEG00000014449
LinkDB
All DBs
Position
LG19:complement(10746040..10863021)
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AA seq
224 aa
AA seq
DB search
MSSDFESYEQDFGTTTAEITNKIGRIPKLSGEEKTQLILNVDKQLEEVRELMEQMDLEVR
EIPIQSRAMYNSRLKSYKQELEKLEKDFKRSRIAYSDEVRHELLGDDGGSSENQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQVGQEILSNLHTDREKIQKARERLRETDAN
LGKSSRILTGMLRRIIQNRVLVFMLGAIILLTIILAIYFNLRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagactttgaatcctacgagcaggactttggaacgactacagccgaaataaca
aataaaattggccgaattcccaaactaagtggagaggagaagacgcagctgattctaaat
gtcgacaaacagcttgaagaagtcagagagttgatggagcagatggatctggaggtgcga
gagatccccattcagagcagagccatgtacaacagccggctgaagagctacaagcaggag
ctggagaaacttgagaaagattttaaaaggtcacgtattgcctacagtgatgaggtgcgc
cacgagctcctcggggacgacggcggatcctcagagaaccagttgataaagttgcgtgaa
gagagagcgcatctgttggacaacacagagaggctggaaaggtcatcgcggagactggag
gctggctaccagatagcagtggaaactgaacaagtcggacaggagattctctccaacctg
cacaccgaccgtgagaagatacagaaagccagagagcggctgagagaaacggacgccaac
ttgggcaagagttcccgcatcctcactggcatgctgagaaggatcatccagaaccgcgtc
ctggtcttcatgctgggagccatcattcttctcaccatcatcctggccatctatttcaat
ctgcgaggccactga
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integrated database retrieval system
