Oryzias melastigma (Indian medaka): 112154089
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Entry
112154089 CDS
T07439
Symbol
myo1d
Name
(RefSeq) unconventional myosin-Id
KO
K10356
myosin I
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112154089 (myo1d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112154089 (myo1d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112154089 (myo1d)
03036 Chromosome and associated proteins [BR:
oml03036
]
112154089 (myo1d)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112154089 (myo1d)
04147 Exosome [BR:
oml04147
]
112154089 (myo1d)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112154089 (myo1d)
Membrane trafficking [BR:
oml04131
]
Endocytosis
Phagocytosis
Others
112154089 (myo1d)
Others
Actin-binding proteins
Myosins
112154089 (myo1d)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112154089 (myo1d)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112154089 (myo1d)
Exosome [BR:
oml04147
]
Exosomal proteins
Proteins found in most exosomes
112154089 (myo1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
nSTAND3
Zeta_toxin
Sigma54_activat
AAA_22
AAA_16
NPHP3_N
IQ
Motif
Other DBs
NCBI-GeneID:
112154089
NCBI-ProteinID:
XP_024140492
Ensembl:
ENSOMEG00000004037
LinkDB
All DBs
Position
LG19:complement(18456863..18561932)
Genome browser
AA seq
1004 aa
AA seq
DB search
MAEHESLEYGKADFVLLDNVSMEDFMANLKLRFEKGRIYSYIGEVVVSVNPYRAMNIYGR
DTIEQYKGRELYERPPHLFAIADAAYKAMKRRNKDTCIVISGESGAGKTEASKYIMQYIA
AITNPNQRAEIERVKNMLLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGH
INNYLLEKSRVIFQQDGERSFHSFYQLLKGAPDSLLRSLHIQKDPAAYNYIKVGGQIKSG
INDGADFKAVADAMKVIGFTGDEIQTVYKILATILHLGNLTFGVDGDVTLIENMKLVSVI
RELLSTKEENVEKALLYRTVATGRDVIEKQHTAQEASYGRDALAKAMYERLFCWIVGRIN
DIIEVKNYDAKVHGKNTVIGVLDIYGFEIFQNNSFEQFCINYCNEKLQQLFIQLVLKQEQ
EEYQREGIPWKHIDYFNNQIIVDLVEQQHKGIFAVLDEACMNVGKVTDEVFLQGLNSKLA
KHAHYTSRKLLPADKSLEFDRDFRIRHYAGDVVYSVVGFIDKNKDTLFQDFKRLLYNSSN
PVLKVMWPEGKLRITEVTKRPLTAATLFKNSMISLVENLACKEPYYVRCIKPNDVKSPLI
FEQERCRHQVEYLGLLENVRVRRAGFAYRQTYPRFLQRYKMISKFTWPNHDLPSDKDAVK
KLLHGCGFEHDVAYGKTKVFIRTPRTLFSLEEQRAEMVQRIVLFLQKVWRGTLARMRYRR
MRAAHIILQAYRRYKVKSYIREVNRRFKNVQTMKDYGRRVKWPTPPKVLRKFEEALKNIY
NRWWAWTLIKGLSPEETLQVRAKVASLEALKGQRADLGLQRAWEGNYLKRDSPDTAASFT
LVSSELQRKDKFMRVLFSCNVRKINRFHKTENRAVLITDRHLYKMDPVKQYKPMKSIPLY
NVTGMSVSPGKDQLVVFHTKDSRDLVVCLQGMVPANESRIGELVGTLLSHFKSERRKLQV
NIASPIQCSMNGRKCTVIVEPKTNQSQPDFTKSRSGYILAVPGN
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcacgaaagcctggagtatggaaaggcagattttgtgcttttggacaacgtg
tctatggaggacttcatggccaacttaaagctcaggtttgagaaggggaggatctactcc
tacatcggggaggtggtggtgtccgtcaacccgtaccgcgccatgaacatttacggccgg
gacaccattgagcagtacaagggccgcgagctgtacgagagacccccccatctctttgcc
atcgcagacgctgcttacaaggccatgaagcggaggaacaaagacacctgtattgttatc
tcaggggaaagtggtgcaggaaagactgaggccagcaaatacataatgcaatacatcgct
gctattaccaatcctaatcagagggctgagattgaaagagtgaaaaacatgctgcttaaa
tccaactgtgtcttggaggcctttggaaacgctaagacgaaccgcaacgacaactccagc
cgcttcggcaaatacatggacatcaactttgacttcaaaggagatccaatcggaggccat
attaacaactacctgctggagaagtcgagggtcattttccaacaagacggagagaggagc
tttcactcgttctatcagctgcttaaaggagctccagattctctgttgcgctctcttcac
atccaaaaagacccggcagcctacaactacatcaaagttggaggccagattaagtctggc
atcaatgacggcgctgatttcaaagctgtagccgacgccatgaaagtcatcggtttcaca
ggagacgagattcagactgtttacaagatcctggctaccattctgcatctgggaaacttg
acgtttggagtggacggcgacgtgaccctcatagagaacatgaagctcgtgtctgtcatc
agggagctgctttccacaaaagaggagaacgtggagaaggcgctgctctaccgaacggtc
gccacaggtcgagacgtcatcgaaaagcagcacacggcccaggaggccagctacgggcgg
gacgctctggccaaggcaatgtacgagcgtctgttctgctggatcgtgggacggatcaat
gacatcatcgaagtgaaaaactatgacgccaaagtccacgggaagaacacagtcattgga
gtgctggacatctacggctttgagattttccagaacaacagcttcgaacagttctgcatc
aactactgcaatgagaagctgcagcagctcttcatccagctggtgctgaagcaggagcag
gaggagtaccaaagagagggcatcccctggaaacatatcgattacttcaacaatcagatc
atcgtggacctggtggagcagcagcataaaggcatctttgctgttctggatgaagcctgc
atgaacgtcggtaaagtcaccgacgaggttttccttcaaggactcaacagcaagctggcc
aagcacgctcactacaccagccgtaagcttttaccggctgataaaagtttggagttcgac
agagactttcggatccggcactatgcaggagatgtggtgtactcggtcgtgggcttcatt
gacaagaacaaagacactttgttccaggacttcaagaggctgttgtacaacagttccaac
ccggttctgaaggtgatgtggcctgagggtaagctgcggatcaccgaggtcaccaaacgg
ccgctgacggcagcgaccctcttcaagaactccatgatctcattggtggagaacctggcc
tgtaaggaaccctattacgtgcgctgcatcaaacccaacgatgtcaagtcccctctcatc
ttcgagcaggaacgctgccgccaccaggtggagtacctgggactgctggagaacgtcagg
gtccgaagggccggcttcgcctacaggcagacgtatccacgcttcctccagagatacaag
atgatctcaaagttcacctggccgaaccacgacctgccgtcggacaaagacgccgtcaag
aagctgctgcatggttgcgggttcgaacacgacgtggcgtacggcaaaaccaaagtcttc
atccgcacgccgcgcaccctgttcagcctggaggagcagcgggccgaaatggtccagagg
atcgtcctcttcctccagaaggtgtggcgggggactctggctcgaatgagataccggcgt
atgcgcgccgcccatatcatcctgcaggcctacagacgctacaaggtcaagtcttacatc
cgcgaagtcaaccgtcgctttaaaaacgtgcagaccatgaaagattacggcagacgcgtg
aagtggcccaccccacccaaagtcctacgcaagtttgaagaggctctgaagaacatctac
aacaggtggtgggcatggaccctcatcaaaggcctctctccagaggagactctgcaggtg
agggccaaggtagccagcctggaggccctgaagggtcaaagagctgacctggggttgcaa
agagcctgggaaggcaactatctgaagcgggacagtcctgacacggcggcatcattcaca
ctagtgtccagcgagctgcagaggaaagacaagttcatgagagtcttgttctcctgtaac
gttcgaaagatcaaccgcttccacaaaacggagaaccgggccgtgctcatcaccgaccgc
cacctgtacaagatggaccccgtgaagcagtacaagcccatgaagagcatccccctctac
aacgtgacgggaatgagcgtgtcccccggcaaagaccagctggtggtgttccacaccaag
gacagccgcgacctggtggtgtgtctgcagggcatggtgccagccaacgagagccgcatc
ggggagctggtgggcactctgctcagccacttcaagagtgagaggaggaagctgcaggtg
aacatagcgagccccatccagtgcagcatgaacgggaggaagtgcaccgtcatcgtagaa
cccaaaaccaaccaatcccagccggacttcaccaagagccgatcaggttatatcctggct
gttcctggaaactga
DBGET
integrated database retrieval system
