Oryzias melastigma (Indian medaka): 112154130
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Entry
112154130 CDS
T07439
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
KO
K12188
ESCRT-II complex subunit VPS22
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112154130 (snf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112154130 (snf8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112154130 (snf8)
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
112154130 (snf8)
Exosome [BR:
oml04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112154130 (snf8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Sigma70_r1_1
CDK5RAP3
MarR_2
DotZ
MarR
DUF4896
Motif
Other DBs
NCBI-GeneID:
112154130
NCBI-ProteinID:
XP_024140566
Ensembl:
ENSOMEG00000003554
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All DBs
Position
LG19:complement(18915793..18918266)
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AA seq
257 aa
AA seq
DB search
MRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIVQMSKQLETFKSNLEEFASKHKQEIRKN
SQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITL
DELHQRVLKGRGKYAQDVSQDDLIRAIKKLKVMGSGFGMIPVGGSYLVQSVPAELNMDHT
VVLQQAEKKGYVTVSEIKDVLKWEKERACHVLDHLLKEGLAWLDSQAAGEPQYWLPALFS
ELSSRDVTPEEVNQMTP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagaggtgttggtgcgggagccatcgccaaaaagaagctggcagaggctaagtat
aaagaaagaggtactgttctagcagaagaccagattgtccagatgtctaaacagttggag
accttcaagtccaacctggaggagtttgccagcaaacataaacaagagattcgcaagaac
tcccagttcagggtccagtttcaggaaatgtgtgccaccattggtgtcgacccacttgcc
tctggaaaaggattctggtcggagatgcttggtgttggggatttctattatgagctcggt
gtacaaatcattgaagtctgcctggctctgaagcacagaaatggaggactcataacttta
gatgagcttcatcagcgagttttgaagggacgcggtaaatatgctcaagatgtgagccag
gacgacttgataagagccataaaaaaactaaaagtcatggggagtggttttgggatgatt
cctgttggtggttcctaccttgttcagtcagttccagcagagctcaatatggaccacact
gtagttctacagcaggctgagaaaaaaggatatgttactgttagtgaaatcaaggatgtt
cttaaatgggagaaggaaagagcatgtcacgtcttggatcacttgctaaaggaaggcctg
gcttggctggactcacaggctgccggggagcctcaatactggctgccggcgctcttctcc
gagctgtcgtctcgtgacgtcacaccagaggaggtcaaccagatgacaccatga
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integrated database retrieval system