Oryzias melastigma (Indian medaka): 112154175
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Entry
112154175 CDS
T07439
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X3
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
112154175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112154175
Ion channels [BR:
oml04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
112154175
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Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
112154175
NCBI-ProteinID:
XP_024140680
Ensembl:
ENSOMEG00000013582
LinkDB
All DBs
Position
LG19:complement(11315004..11397895)
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AA seq
1207 aa
AA seq
DB search
MSNNMDKFSPSVHMSKINVVIPYSADMLCDSNGQRMWWAFLASSMVTFFGGLFIILLWRT
LKYLWTVCCHCKAKKKEVHRITTGEHIKRVDKDDSAASEVGWMTSVKDWAGVMISAQTLT
GRVLVVLVFALSIGALVIYFIDSSDPIEFCKNFYSDFTLQIDMAFNIFFLLYFGLRFIAA
NDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSN
SIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQALSYWECVYLLMVTMSTVGYG
DVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCGHI
TLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDL
ARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLN
IPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEG
VANEMYTEYLSSAFVGLSFPVICELCYVKLKLLLIAIEYKSDQRESSTLINPGNHVKMQE
GTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKKLIYFEEDRQSALSPKKKQR
NGGMRSSPNSSPKIMRHDPLLIPGSEQIESMDENVKKYDSTGMFHWCPSRDIEKVILTRS
EAAMTVLSGHVVVCIFGDVKSALIGLRNFVMPLRASNFHYHELKHIVFVGSLEYLKREWE
TLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKECILASLNIK
SMQFDDSIRVLQANSQGFTPPGMDRSSPENSPVHGLVRQTSVTTGANIPIITELAPLAKQ
GKKLPVISFSQDKSSGTSIQMITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAV
SVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTLANRDRCRV
AQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNTQSQCTKRYVITNP
PYAFELVPSDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPTTNRTNRIKN
RDSRDKQNATRMNRISQEKTWFTDEPDNAHLRTMQLKPVNALAVNQTSHNKSTSSLIPPI
REAEDEC
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaatatggataaattcagcccgtcggtgcacatgtccaagatcaacgtggtc
atcccctattcagccgatatgttgtgtgacagcaacggccagcggatgtggtgggctttc
ttagcctcgtccatggtcactttcttcgggggactcttcataatcctcctgtggagaact
ctgaagtatctgtggactgtgtgctgccactgtaaagccaaaaagaaggaggtccatcgg
atcaccacaggggaacacatcaagcgtgtggacaaagatgacagtgcagccagcgaggtg
ggctggatgacctcggtcaaagactgggctggagtcatgatatccgctcagacgctgacg
ggaagagtcctggtggtgcttgtgttcgctctcagcattggagcccttgtaatatacttc
atcgattcctcagaccccattgagttctgcaaaaacttctattcggatttcacgctgcag
atcgacatggcgttcaacatcttcttcctgctgtattttggcctccgattcatcgccgcc
aacgacaagctgtggttctggctggaggtcaactcagtggtggacttcttcacggttccc
ccggtgtttgtatcagtgtacctgaacaggagttggcttggtttgaggtttttaagggcc
ttgaggttgatacagttctcagaaattttacagtttttaaatatactcaagacaagcaac
tcgataaagctggtaaacttgtgttccatcttcataagcacatggctgaccgcggcaggc
ttcattcatttggtggaaaactctggggatccttgggagaacttccaaaactcccaggca
ctttcctactgggaatgtgtctacttactcatggttacaatgtccactgttggctatgga
gatgtttacgctaaaaccaccctcggccgcctgtttatggtgttcttcatccttggtggt
ttggccatgtttgcaagctacgtccctgaaatcatagagttaataggaaaccgcaagaaa
tatggtggttcctatagtgcagttaatgggagaaagcacatcgtggtctgcggtcatata
acactcgagagtgtgtccaacttcctaaaagacttcctacacaaggacagggatgatgtc
aatgtagaaatcgtttttctccataatatttcccctaatcttgagctggaagccttgttc
aagcgccatttcacccaggtagagttttaccaaggatctgtcctgaacccacacgacctg
gccagagtcaagatcgagtcagcggacgcctgcctaatcttagccaacaaatactgtgct
gaccccgacgccgaggacgcgtccaacatcatgagagtcatatccatcaagaactaccac
ccaaagatcagaataatcactcagatgttgcagtaccacaataaggctcacctgctcaac
attccaagctggaactggaaggagggagatgacgccatttgccttgcagagctaaagctg
gggttcattgcccaaagctgccttgctcaaggcctgtccaccatgctggcaaaccttttc
tccatgaggtctttcatcaagattgaggaggacacgtggcagaagtattatctagaggga
gtcgccaacgaaatgtacacagagtacctgtcgagtgccttcgtgggtttgtccttccct
gtgatttgcgaactgtgctatgtgaagctaaaactgctgctcatagctatagaatacaag
tcagaccaaagggaaagcagcaccctgatcaaccctggtaaccacgtcaaaatgcaggag
gggactctgggattcttcatcgccagcgacgccaaagaagtaaaaagagctctgttttac
tgtaaggcgtgtcacgatgacataactgatccgaaaaggataaagaaatgtggatgcaag
aaattgatttattttgaggaggaccgacagtcagctctgtcgcccaaaaagaagcaacgc
aacggaggcatgaggagttctccgaactcctcacccaaaataatgagacacgatccgctc
ctcatcccagggagtgaacagattgagagcatggatgagaacgtaaagaaatacgactcc
acggggatgtttcactggtgcccatccagagacattgagaaggtcatcctgactcggagt
gaggccgccatgactgttctgagtggtcacgtggtcgtgtgcatatttggagacgtcaag
tccgctttgatcggacttcggaattttgtaatgcccctgagagcaagcaacttccactat
catgagctgaagcacattgtgttcgtcgggtccctcgagtatctgaagcgggagtgggaa
actttgcataatttcccaaaagtctccattctgccaggcacaccgttgagtcgggcagat
ctgagggccgtcaacatcaacctgtgcgacatgtgcgtcattctgtcagccaatcaaaac
aatatcgatgatgcatcactacaggacaaagagtgcattttggcgtcacttaacatcaaa
tccatgcaatttgacgacagcatcagagtcctgcaggccaattcccaaggtttcactcca
ccagggatggacagatcgtctccagagaacagcccagttcacggtttagtacggcaaacc
tccgtcaccactggagccaatattcccatcataacagaactggcaccgttagcaaagcag
ggcaaaaaactgcctgtgatttcattcagtcaggataaaagcagtgggaccagcattcaa
atgattactgagctggttaacgactccaacgtgcagttcctggaccaagacgacgacgac
gatccagacacagagttgtacctcactcagcctttcgcctgcgggacggcgttcgcggtc
agcgtgctggactcgttaatgagcgctacatacttcaatgataatatcctcaccttgatc
cggacgttggtaacaggcggcgccacgccagagctggaagggttactggcggaggagaat
gcattaaggggaggttacagcacgccacagacactggcgaacagggacaggtgtcgcgtg
gcacagctggccttgtacgacgggccctttgccgaccttggggatggtggttgttatggc
gacctgttttgtaaagcccttaaaacgtacaatatgctgtgtttcggcatttatcgactc
cgagatgcacatctgaacacacagagccagtgtacgaaacggtacgtcataactaatccg
ccgtatgcattcgagctggtgccctcggacctgattttctgcctgatgcagtttgatcac
aacgccggccaatcgcgaaccagcctttcccactcttctcattcgtcacattcttcaagc
aaaaaaagctcgtccgtacactctatcccaaccaccaaccgcaccaaccgcatcaaaaac
agggactcaagagacaagcaaaatgcaacaaggatgaatagaataagccaagaaaagaca
tggtttacagatgagccagacaatgcccacctgaggaccatgcagctgaagcctgtgaac
gcgctcgccgtcaaccaaaccagtcacaataagtccacaagcagcttgattccacccatc
agagaggcagaggacgagtgttga
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integrated database retrieval system
