KEGG   Oryzias melastigma (Indian medaka): 112154228
Entry
112154228         CDS       T07439                                 
Symbol
polr3e
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03020  RNA polymerase
oml04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112154228 (polr3e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    112154228 (polr3e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oml03021]
    112154228 (polr3e)
Transcription machinery [BR:oml03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     112154228 (polr3e)
SSDB
Motif
Pfam: RPC5 RPC5_C FYVE_CARP1-2
Other DBs
NCBI-GeneID: 112154228
NCBI-ProteinID: XP_024140784
Ensembl: ENSOMEG00000008213
UniProt: A0A3B3DAI0
LinkDB
Position
LG19:complement(13781621..13793389)
AA seq 686 aa
MASGDEDDPIIEEIDVYLAKSLADKLYLFQYPVRPAIMTYDNVNHLAAKIKPKQQRVEVD
VSMDTMSPNYCRSKGEQIALNVDGATYDETNTYSAKMMDKQTFTSIQATTNTSRYAAGVF
RKGELHVTPLTGILQLRPSFSYLDKADNKTREREAANEGGDSSQDEAEEEAKAITVRFAR
PESEQARQRRIQSYEFLQRKQAEEPWVHLQYHGVKDGRSEHEKQYLFCQSVDASENSELV
KSPKEYLSMLMPPLAEEKVAKPVGPSNVLSMAQLRTLPLAEQVKTLMKNVKVMPFANLMG
LMASGVDQISVLRCIQQVALLVQGNWVVKSDVLYPKNTCSAHSGVPAEVLCRGRDFVIWR
FTLERSVMRKEIASIIKLPPEDVKEFLEHVAAPRVNRGWEFLLPTDVDFIKKHPDVAHRQ
SMLWLGIQSKLEKVFNFCKEDFIPKNSSQPELVHMSGDQRLKMALERAKETQLSLQKDLD
ARRAENAVRIKREPTSDREDEPMDTSSSSAPNGSLNGYPASSHHFDQVNGGSPASAPSPE
LQDFVKNTFRKHFVLTLNELKRLFNLHLASLPPGQNVFHSISDHLLQDAVLLCQCKQILV
PFPAQSKAAPDEQKVFALWESGDDFDNHRRQLYDLFSKSFRVRRSMIQLKLSQELGDVSK
TDVDRVLHDCCTSYAGCWYLKGTAPS
NT seq 2061 nt   +upstreamnt  +downstreamnt
atggctagtggagatgaagatgatccaattatagaggagatcgatgtgtacctcgccaaa
agcctcgcagataagctctatctttttcagtatcctgtccgaccggctattatgacctac
gacaacgtcaatcatctggcggctaagatcaaacccaaacaacagagggtggaggtagac
gtatccatggacaccatgagtccaaactactgtcgcagtaaaggagaacaaatagctctc
aacgtggacggcgcgacctacgatgaaaccaatacgtactccgcgaaaatgatggacaag
cagacctttacctccatccaggccaccaccaacacctccagatatgcagctggtgtgttt
cgcaaaggcgagcttcatgtcactcctctgacgggaatcttgcagttgagacccagcttc
tcgtatctggacaaggccgataacaaaaccagagagcgcgaggccgccaatgaaggtggc
gactcgtcccaggatgaagctgaagaggaggccaaagctattacagtgaggtttgctcgt
ccggagtcggagcaggcccggcagaggaggatccagtcgtacgagttcctgcagaggaag
caggcggaggagccctgggttcacctgcagtaccacggtgtgaaggacggacgctcggag
catgaaaagcagtacctgttctgtcagtctgtggacgcctctgaaaactcggaactggtt
aaatctcctaaggagtacttatcaatgctgatgccgcctctcgctgaggagaaagtagca
aagccggtcggtccgagtaacgtgctctccatggctcagctccgcactcttcctctggca
gagcaggtcaagacgctgatgaagaatgtcaaagtgatgccttttgccaatctaatgggc
ctgatggcgtctggcgtcgaccagatctcagtgctgcgctgcatccagcaggtggcactg
ttggttcagggaaactgggttgtgaagagcgatgttctgtatccaaagaatacctgcagc
gctcacagcggcgttcctgctgaggtgctctgtcgaggcagagactttgtgatctggagg
ttcactctggagcgttctgtgatgagaaaggagattgcatccatcattaaacttcctccg
gaggatgtgaaggagttcctggagcacgtggcggcgcctcgggtcaaccgtggctgggag
ttcctgctgcccacagatgtggacttcattaagaagcatccagacgtggcgcacaggcag
agcatgctgtggctcgggatccagagcaagttggaaaaggtgtttaatttctgtaaagaa
gactttataccgaagaattcttctcagcctgagctcgtccacatgagcggggaccagcgc
ctgaagatggctctggagcgggcgaaagaaacccagttatccctgcagaaggacctggat
gccaggcgggcagaaaacgccgttcgcatcaaacgggagcccaccagcgacagggaggac
gagccaatggacacctcgtcgtcttctgcccctaatggttcactgaacggttaccccgcc
tcctcccaccacttcgatcaggtgaacggggggagccccgcgagcgcgccgtctccggag
ctgcaggactttgtgaaaaacactttccggaagcattttgtattgacgttgaacgagcta
aagcgactctttaaccttcacctggcgtctttaccgcctggacaaaacgtcttccactcc
atctcggaccatctactgcaagacgccgtgctgctctgccagtgcaaacagatcctggtg
ccttttcctgcacaaagcaaagcagctcctgatgaacaaaaagtgtttgcattgtgggag
agcggagacgactttgataatcatcgtcggcagctctacgacctgttcagcaaaagtttc
cgggtcaggaggagcatgattcaactcaagctgtcgcaggagctgggcgacgtgtcgaag
actgacgttgaccgagtgcttcatgactgctgtacgagctacgcgggctgctggtacctt
aaaggaacggcaccatcttga

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