Oryzias melastigma (Indian medaka): 112154267
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Entry
112154267 CDS
T07439
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112154267
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112154267
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
NGL family
112154267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_14
LRR_9
V-set
LRRNT
Ig_2
DUF7617
Ig_6
Motif
Other DBs
NCBI-GeneID:
112154267
NCBI-ProteinID:
XP_024140846
Ensembl:
ENSOMEG00000018057
LinkDB
All DBs
Position
LG19:complement(9171458..9186830)
Genome browser
AA seq
742 aa
AA seq
DB search
MRVVMVTSPCTPSPLLWLVQILLWFHNHGPHLIEAAPPCPNPCTCSNQASRVICTRKNLD
QIPDSISENTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLGAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVKLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSKVSVIERNAFDELKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGKYIGELDQSHFPCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTASAVLNVSASDPTYTYFTTVTVETLETARGEEENSARQFINETFIDLPNPTI
QRGLDGRLGVTISPSLSSLSSLSPRANRATEDAVTEPIIAVTNIPGLDDVMKTTKIIIGC
FVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGTGSGISGGSTINSG
TCGEGTLRIHHPEIVNLPNIGCTDTLNHYYKAHHFNNNVLGLNIGNEGMGPGGIHNKNLH
GQDNPISCTSVPIPTTNLLGTSGNGTNTIPSSMSPPLPISLPVPTMGLHGSIKGFMGQNQ
NPQMEPLLFKGSSKENVQETQI
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgcaccccttcccccctcctctggttggtccag
attttgttgtggtttcacaaccatggacctcacctgatagaggcagcacccccatgcccc
aacccttgtacctgctccaaccaggcgagccgtgtcatctgtacaagaaagaacttagat
caaatccctgacagtatttcagaaaacacaagatacctcaatctacaggagaactccatt
caggtgatcaagtcagacacctttaaacatttgaggcacctggaaattctccagctttct
aagaaccacatccgacagattgaggtgggagctttcaatggtctcccaaacctcaatact
ttggagctttttgacaaccgtctcacagtggtaccatctcaagcctttgagtacctcagc
aagctaagggaattatggcttcgaaacaaccctatagagacgctgggggcctttgccttt
cacagagttccttctttacggcgtctagatcttggggagctcaggaagttggatttcatc
tcagaagctgcctttgaaggtcttgtgaatttacgtttcctaaaccttggcatgtgtggc
ttaaaggacattcctaaccttactccactggttaaactggaggaattggagctgtcaggg
aaccagttgggaattgtccgacccggatctttccagggtctggtttctcttcgcaaattg
tggctaatgcactccaaagtgtcagtcattgaacgcaatgcttttgacgaactcaagagc
ttggaagagctgaacctctcccacaactcactgcattcccttccccatgaccttttcacc
cctttacatcaattggagcgggtgcatctaaaccacaacccttgggtttgcaactgtgat
gttctgtggctaagttggtggcttaaagaaactgttcctagcaacaccacatgttgcgct
cgttgtcatgcacccccaggtctaaagggcaagtacattggggaactagaccagagccat
tttccctgctatgctccggtgattgtagagccgcccacagacctcaatgtcaccgaaggc
atggctgctgaactgaaatgtcgtacaggaacttcaatgacctctgtgaactggttcacc
ccaaatggcactctgatgacacacggatcataccgagttaggatctcagtgctccatgac
ggaacactgaactttacaaatgtgaccgttcaggacactgggcaatacacttgcatggta
accaactctgctggaaacactactgcatctgctgttctaaatgtgtctgcttctgacccg
acttacacctacttcaccacggtcactgtagaaacattagaaacagcaagaggagaagag
gagaactcagcaagacagttcataaatgagaccttcatagatttgcctaatcctacaatt
caaagagggttagatggccgcctgggtgttaccatatcgccgtccctctcatccctttcc
tcactgtcaccgagagctaacagagctacggaagatgcagtgactgaacctataattgct
gtaacgaacatccctggccttgacgatgtgatgaaaacaacaaagattatcattggttgt
tttgtggcaattacttttatggcagctgtgatgttggtggttttctataaactccgaaaa
caacaccaactacacaaacatcacggcccagcacgagccattgaaattgtgaacgtagag
gacgagattggagccgggactggaagtggaatctcaggtggttcgacaattaactctggc
acgtgtggagaaggaaccctaagaatacatcatccggaaatcgtcaaccttcctaacatt
ggttgcacggataccctaaaccattactacaaggcacaccattttaacaacaacgtgttg
ggtctcaatattggcaatgaaggaatgggaccaggtgggatccacaacaagaatctgcac
ggccaagataaccccatctcttgcacctctgttccaattcctactactaatttactcggc
acatcaggcaacggaaccaacaccatccccagctccatgtccccaccactgccgatatct
ctccctgtgcctaccatgggtttacatggatcgatcaagggtttcatgggccaaaaccaa
aatcctcaaatggagccccttctcttcaaggggagctcgaaggaaaatgtccaagagact
cagatctaa
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