Oryzias melastigma (Indian medaka): 112154282
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Entry
112154282 CDS
T07439
Symbol
faap100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112154282 (faap100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oml03400
]
112154282 (faap100)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
112154282 (faap100)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCAA
Motif
Other DBs
NCBI-GeneID:
112154282
NCBI-ProteinID:
XP_024140884
Ensembl:
ENSOMEG00000006022
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Position
LG19:2643676..2651189
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AA seq
816 aa
AA seq
DB search
MEGRCAVDTWTEFGFLRASSTPKVKLVFGTHVICTGDEEVYVFSVQEKNITAVLQFPEEV
VDLIESHNKHLLIACSSGVYCVDLQPLLVSSSADASSGPAELKISSEFCVLGGHGLSSLL
LVGSTLLTLGQRNTSWMLTLYKLPQPEQPSSYEMLGSFSLPLLSPVLLDRTETEQTRRSL
LICLHSGSPPASNDSYLTHGQFGIQPVLFKLLFGVDAALARSPVLLWGLPDGRLCFLPLH
LPGSQIRVLHSLEQPVAFVGASVVGETDPGLAQCLVVVGERGRVVLIRTDRSGSETGGST
AGFAERCVPGPVKCCSVDNNCLYYSTGSDLLRLNLLGSSGREDGAVQMPTTLNVCRIIAL
VAPTCNPEGGAQLIGLSDRGKLSGIKLPVGEQEVGFYQLPATQVGRSVKDLLSAIGDICE
RASALKTVIKSQNVSLKRLNQVVNICLLLKSAANTDEHRPIKEKPIRCCATAEWSRLLLK
DSLNLTCVLENSSPYTLERGWTLCITVSPLSCSPGEGDETSSTFAFPVINLSPGGALEVS
VPVAAAGDAAFPLTVNCWLVFSLLSVLEEEDLESLQSRHFTFPLNSLTVDWLHILREIGP
TVSQKSQGSTTDAIEEFVSSRRIDGHKGANGGRENATVYSTSVRVSPEILRDTLKTERFG
LGTSDLHLSLLNWLFESHGGVKMGRRGDQDGMRSSEVHARSPNEATVKLSVKEVNEENSG
KEAHVEVQIESSSVAAVCGLHHAVLRRMQSLLVMVPMETAAAKKIQISDLKLALQRAEIQ
QSGISDALGSDVSSAQMNSVLLDVYQKLRENRLLMI
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacgctgtgctgttgacacctggactgagtttggctttttgagagcatcaagc
accccgaaagtgaagctcgtgtttgggacgcatgtcatctgcactggagatgaagaagtc
tatgtttttagtgtccaggagaagaatatcacggctgttctccagtttccagaagaagtg
gttgatctgattgagagccacaacaaacatcttctgattgcatgcagcagtggagtgtat
tgtgttgatttgcagcctctgttagtcagctcctcagcagacgcgtcctccggtccagct
gagctgaaaatctcctcagagttctgtgtgcttggcggtcatggtctgtcgtcgctgctc
ctggtcggctctacactcctcactctcggccagagaaacacatcctggatgctgactttg
tacaaactcccacaaccagaacagcccagcagctacgagatgctcggctccttcagcctg
ccgctgctctcaccggttctactggacagaaccgagacagaacagacgaggaggtctctg
ctgatctgcctccactctggttcacctcctgcctctaatgattcatatttaacacatgga
cagttcggcattcaacctgtcctctttaagcttttgtttggagtcgatgctgctcttgcc
agatcaccggttctactttggggcctgccagacggacggctgtgtttcctccctctgcac
ctcccaggatctcagattcgagttctgcacagcctcgagcagcctgtggcgttcgttggt
gcgtcggttgttggggagacggatccagggctggcgcagtgtttggtggttgttggggag
agaggcagggtggttctgattaggacggacaggagcgggtcagagacgggcggcagtacc
gctggatttgccgagcggtgcgtgccagggcccgtgaagtgttgcagcgtggataacaac
tgtctgtactacagcaccgggtcagacctgctcagattaaatctgcttggatcctctgga
agagaggatggggcggtccaaatgcccaccactctaaacgtgtgcagaatcatcgccttg
gttgcaccaacgtgcaatcctgaaggtggagctcagctgattggactctctgacagaggg
aagctctcagggattaaactacctgtcggggaacaggaagtgggattttatcaacttcct
gccacacaagttggccgcagtgtgaaggaccttctgtccgccataggagacatttgcgaa
agagcgtctgcactgaaaacagtcatcaaatcccaaaacgtctctctcaagcggttgaat
caggttgtcaacatttgtcttttgctgaaatctgctgcaaacaccgacgagcatcgtcca
atcaaagagaagccgatcagatgttgtgccacagccgagtggagcagattgcttctaaag
gactctctgaatctcacatgtgtcctggagaactcaagtccttacaccctggagcgagga
tggactctatgcatcactgtctcccctctgtcttgttcacctggagaaggtgacgaaacg
tcctcaacgtttgctttcccggtaatcaatctttctccaggaggggcgttggaggtgtcc
gtgccagtcgcagccgcaggtgacgccgccttccccttgaccgtgaactgttggcttgtc
ttctccctcttgagtgtcctggaagaggaggatctggagagcttgcagagccgccatttc
accttcccgttaaattccctgaccgtggactggttgcacattttgcgagagatcggtccc
acggtgtcgcagaagtcacaagggtcaactaccgatgccatcgaggagtttgtcagctca
cgccggattgatggtcacaaaggcgcaaacggaggcagagagaatgccaccgtgtactct
acaagtgttcgggtgtcgccagagatactgagggacacgctgaagaccgaacggttcggt
ttgggcaccagtgacctccatctgtctcttctcaactggctgtttgagagtcacggagga
gtgaagatgggacgtagaggagatcaggatggcatgaggagctcagaggttcacgcacgt
tctcctaacgaagccacagtcaagctgagcgtcaaagaggtgaacgaggagaactctggg
aaggaagctcacgtagaagttcagattgagagctcgtctgtagcggcggtgtgtggactg
catcacgctgtgctgcggcggatgcagagtttgttggtgatggttcccatggaaacagct
gctgccaaaaagatccagatctcagatttaaaattagctcttcaaagggctgagattcag
cagagtggaatctcggacgctctcggctcagacgtgtcctccgctcagatgaactccgtc
ctgctggacgtttaccagaagctcagagaaaaccgtctcctcatgatttaa
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