KEGG   Oryzias melastigma (Indian medaka): 112154292
Entry
112154292         CDS       T07439                                 
Name
(RefSeq) elongin-B
  KO
K03873  elongin-B
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112154292
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oml04121]
    112154292
   03400 DNA repair and recombination proteins [BR:oml03400]
    112154292
Ubiquitin system [BR:oml04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     112154292
   Cul5 complex
     112154292
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112154292
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 112154292
NCBI-ProteinID: XP_024140907
Ensembl: ENSOMEG00000021737
LinkDB
Position
LG19:8363361..8369595
AA seq 119 aa
MDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKRAPEDQRLYKDDQLLEDSKTLGDC
GFTNQTARPQAPATVGLAFRTNDEMFEQLHIEAFSSPPELPDVMKPQDSGSTANEQAVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggatgtgttcttaatgattcggcgtcacaagaccacaatcttcacagatgccaaagag
tccaccactgtctatgagttaaaacgaattgttgaaggaatcctgaaaagagcacctgaa
gaccagcggctctacaaagatgatcagttgctggaggacagcaaaactttgggggactgt
ggatttactaatcagactgccagacctcaagcgccggctacagtgggtctagctttccgt
acaaatgatgagatgttcgagcagctgcacatcgaggccttctctagccccccagaactg
cccgatgtgatgaagccccaggactctggtagcactgccaatgagcaggcagtgcagtga

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