Oryzias melastigma (Indian medaka): 112154372
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Entry
112154372 CDS
T07439
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112154372 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112154372 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
oml02044
]
112154372 (sec31b)
Membrane trafficking [BR:
oml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112154372 (sec31b)
Secretion system [BR:
oml02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
112154372 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_TEP1_2nd
WDR55
TPR_Sec16
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Prp18
Beta-prop_DCAF4
SRA1
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
112154372
NCBI-ProteinID:
XP_024141033
Ensembl:
ENSOMEG00000011837
LinkDB
All DBs
Position
LG19:complement(11860220..11872247)
Genome browser
AA seq
1202 aa
AA seq
DB search
MRLKEIQRTAHQAWSPSGHHPIFLALGTSAQQLDASFNTTAAIEIFQMDFSDPSLEMQLK
GSIPTANRLHSIVWVNFGMGADETGGRLICGSESGSLTVYKPEAIMNSGADSLVGQSDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFTSPMTPGAKTQPAEDISVVSWNRQVQ
HILASASPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPDVATQLVLASEDDRLPVI
QMWDLRFATSPLKVFENHTRGILSISWSQADPELLLSSAKDNRILCWNPNTGEVIYELPT
TNQWCFDVQWCPRNPALLSTASFDGRISVYSVMGGSLKAQQQSTADKISSSFDTMDPFGT
GQVLPPLQVPLPHVQDTIVPPLKKPPKWVRRPVGASFAFGGKLITFENPKQPLVQSPQPV
PRQVFMSQVTTETEFLQRSRELQAALQSGSFNTYCQSKIQSAKSDTEQDIWKFLLVNFED
EARVKFLKLLGFSKDELERKISKCLGKNCQPNGLGVDANDLAEKMQRLSTERSEEGAESR
TSGSVSPADFFSHTPKETPNFQIPVSCDSDGLISQALLVGNFEGAVELCLNDGRYAEAIL
LSISGGEELLKKTQQKYLSKRKNSISMLISSVVTQNWRDIVQCCELDNWKEALAALLTYA
HPEDFAFLCDILGNRLEHEGTEKRCLQACLCYICSGNIEKLVECWALHRDCSSPLGLEDL
VEKVMMLRKSIERLRNNEVAIQSPILAEKLTSYAGILAAEGSLSTAMAYLPENSDQPAIT
MLRDRLFHAQEEASAQPQITQPSKVALSTANAIPAPKAPFMNPFQPSAPSPVVPPQQPQI
PSVFTPQAPLPNPGSGLPPTSHVQHPSTPPSAMRPPYPQHPSMPPGIPSHQPFQPQPVSA
GGPFPPSVPSMPAPSLSGPQLPPSSSTPGGLPPMPSPGVPPTGFMPSTSLPSGFMPPSSQ
PGAPVPMYPGNFPNQGPPAPPMSSAHFTPAGPGYPQGGPGAPAVKPFPAPVVAPPPTGPQ
EGWNDPPTVRGGPRKTKVSSNYTPPAPITAPVMGFPGESQQPHDPTQVPPGAPQEPSVQL
LQQLPAERVEQKEIPPEHVILKTTFDSLVQRCQLAAGDPQTKRKLDDAGKRLGHLYDKLR
EQSLSPNILNGLHEISRCVSSQNYQRALEVHTQVVSSSNFSEISAFMPILKVVITTANKL
GV
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaaggaaatccagaggactgcccatcaggcttggagtccttcgggacaccat
cctatctttctggctttgggaacatcagcacaacagctcgatgcttccttcaacaccaca
gctgccatagagatatttcagatggatttctctgacccttctctagagatgcagctcaaa
ggatcaataccaactgcaaacaggttgcacagtattgtttgggtaaattttggaatggga
gcagatgaaaccggagggagactcatttgtggaagcgaaagtggctcgttgacggtgtac
aaacctgaggccataatgaactcaggagccgattcacttgttggacagtctgataaacat
actggacctgttcgagcacttgatttcaaccctttccagagtaatcttcttgcatcgggg
gcaaatgattctgaaatatatatttgggatctaaacaacttcaccagtccaatgactcct
ggtgcaaaaacacaacctgctgaagacatcagcgttgtgtcgtggaacaggcaggttcag
cacatcttggcttctgcctcccccagtgggaaagcagtggtgtgggacctgagaaagaat
gagcccatcataaagatcagtgatcacagcaacaggatgcattgttctggaatgctgtgg
caccccgatgtggccactcagttagtgttggcctctgaagacgacagactgccagtcatt
cagatgtgggaccttcgctttgccacatcacctctgaaggtctttgaaaatcacaccagg
ggaattctctccatatcctggagtcaggctgacccagagcttctgctcagtagtgctaaa
gacaatagaatcctctgctggaaccccaacactggagaggtcatttacgagcttccaacc
accaaccagtggtgcttcgatgttcagtggtgccccagaaatccagccctgctttcaaca
gcatcatttgatgggagaatttcagtttattctgtgatgggaggaagcttgaaggcccag
caacaaagcacagcggataagatatcttcctcatttgatacaatggatccctttggtacg
gggcaggtgctgccccccctgcaagttcctttgcctcacgtacaggacaccattgttcct
cctctaaagaaaccaccaaagtgggtgcgcaggcctgtgggagcatcctttgcttttggg
ggaaaactgataacctttgaaaatcccaagcaacctttagtgcaaagcccccagcccgtc
cccagacaagtgttcatgagccaagttaccacggagacggagttcctccagcgctctagg
gagctgcaggcagcactgcagtcgggttcattcaacacttattgccagagcaaaatacag
agcgccaagtctgacactgagcaggacatatggaagtttctgctggttaactttgaggat
gaagctcgagttaaatttcttaaacttttgggtttcagcaaagatgagttggaaagaaag
atttcaaaatgtctgggaaagaattgtcaaccaaatgggctcggcgtagacgccaacgat
ctggcggaaaagatgcagcggctttccaccgagaggtctgaagaaggagctgaatccaga
acctctggctccgtctcaccagcagactttttcagtcacactccaaaggaaactcccaac
ttccagattcccgtttcatgtgactccgatgggctgattagccaggcgctgctggtcggt
aactttgaaggtgccgtagagctgtgcctgaacgacggccgttatgccgaagccatcctg
ctgtccatcagcggaggagaagagctgctcaaaaagactcagcagaaatacctgagcaag
cggaagaacagcatttcaatgctcatatcatcagtggtgacccagaactggagggacatc
gtgcagtgctgtgaattagacaactggaaggaagctcttgccgcgttgctgacatatgca
caccccgaggactttgctttcttgtgtgatattcttgggaacaggttggagcatgagggc
acggagaagcgctgccttcaggcctgcttgtgttacatctgctctggaaacatagagaaa
ttggtggagtgctgggccttacatagagactgctcctcacctcttggcctggaggatctg
gttgaaaaggtgatgatgcttcggaagtccatcgagcgcctgcgcaacaacgaggtggcg
atccagagccctatcctggcagagaagctaaccagttatgcaggaatactagctgctgaa
ggtagcttgtccacggctatggcctacctgcctgagaactcagatcaacctgcaatcaca
atgctgagggacagactgttccatgctcaggaggaggcttctgcccaaccacagataaca
cagccttctaaagttgccctgtccactgcaaatgctattcctgcaccaaaggccccattt
atgaatccgtttcagccttctgcaccctccccggtggttccaccgcaacagccccaaata
ccttcagtttttacccctcaagctcctctgcccaacccaggctccggccttccacccacc
tctcatgtacagcaccccagcactccaccgtctgccatgagacctccgtacccacagcat
ccctccatgcctccaggaattccttctcatcagccattccagcctcaaccggtttccgct
ggcggacccttccctccttcagttccttctatgccagctcccagcttatcaggacctcag
ctgccaccttcgtcgtccacccctggaggtctgccccccatgcccagccctggggtgccg
ccaacaggcttcatgccgtctacctctttaccttcaggctttatgcctcccagctcccag
ccaggagccccagttcccatgtacccaggaaactttccgaaccagggaccccccgcaccc
cccatgtcatccgctcactttactcctgctggaccggggtatccccaaggaggtcccggc
gctccagccgtgaagccgtttccagctcctgttgtggctcctcctcccacaggacctcaa
gagggctggaatgaccccccaacagtacgaggtggacccaggaagacaaaggtttccagt
aactacaccccacctgcccccatcacagctcctgtcatgggtttcccaggggagtcccaa
cagccccatgaccccacccaggtcccccccggcgctcctcaggagccgagcgtgcagctt
ctccagcagctgccagcagagcgggtggagcagaaggaaatcccgccggagcatgtgatc
ctcaaaaccacctttgacagcctggtacagcgctgccagctcgcagcgggggatccgcaa
acaaaacgaaagctggatgacgcaggaaaacgtttgggacatctgtatgacaaactgaga
gagcaatcactttctccaaatatcctgaatggactccacgagatcagccgctgcgtctct
agtcagaactaccagcgggctctggaggtccacactcaggtggtcagcagcagcaacttc
agcgagatctccgccttcatgcccatcctcaaagtggtcatcaccaccgccaacaagctc
ggagtctaa
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