Oryzias melastigma (Indian medaka): 112154378
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Entry
112154378 CDS
T07439
Name
(RefSeq) myoferlin
KO
K22125
myoferlin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112154378
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Others
Ferlins
112154378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
NagJ_C
DUF5955
Motif
Other DBs
NCBI-GeneID:
112154378
NCBI-ProteinID:
XP_036073083
LinkDB
All DBs
Position
LG19:3013128..3072659
Genome browser
AA seq
2227 aa
AA seq
DB search
MLRVVVESAKGLPKKKLGSPDPIATVIFKDDKKKTKSINNELNPVWNEVLEFDLKGSPLD
AGSFLEVVVKDYETIGRNILIGSAKIPLRDLASGQLRSLPSKNVPLLGENGQNIGATINL
VVAYDPPANAAPNPNNPPAGDATVDGGEAGSDENEGETTTDLGQSGSAGVSLPKKTSANV
RQRLTRGQSRHRLANKPQDFQFRLIGSAKIPLRDLASGQLRSLPSKNVPLLGENGQNIGA
TINLVVAYDPPANAAPNPNNPPAGDATVDGGEAGSDENEGETTTDLGQSGSAGVSLPKKQ
SANVRQRLTRGQSRHRLANKPQDFQIRVRVVEARQLPGNNIKPVVKVHVCGQTHRTRIKS
GNNPFFDEMFFYNVNMLPADLFEQSISFRVYNSYSLRADSLMGEFKLDVGYVYDEPAHCV
MRKWLLLNDPDDSSSGAKGYLKVSLFVIGTGDEPSVEKRDCDDDQDDIESNLLLPAGVTL
RWATLSLKVFRAEDIPQMDDAFVQSIKEIFGADENKKNLVDPFLEARFAGKKLCTQVIEK
NANPEWNQELNLQVKFPSMCERVKLTVFDWDRLTGNDAVGTTYLDLAKIASSGGETEEEH
AGNADRPSYEGSSIFMLITEFCKLSFHRRDRLTGNDAVGTTYLDLAKIASSGGETEVNPV
ESEVGFLPVFGPCYINLYGSPREFTGLPDPYEDLNFGKGEGVAYRGRILVELSTKLDEKA
EKAIDNIHSDDILVAQKYQRRRKYCLCAVFHSASMIQEPGEPIQFEVSIGNYGNKLDTTC
KPLASTTQYSCAVFDGNQYYYLPWANTKPVVVLTSFWEDISHRLNTVNIILYITQRLQSN
LEAFKVAILAKVPDNKLVEVWLQLLDQLVEDLERFPTPELEGCPNLTSLDIQMKKLRDIT
LNGIKEAVNRMRQEASEIRDTLSDIETWLDKLKQLAEEPQNSMPDVVIWMLRGEKRVAYS
RIPAHEILFSTYSEQACGQNCGKTQTVFLKYPMDKAKGLKVPVQIRVSMWLGLSTEEKKF
NSYSEGTFSVFAELYENQAKVFGNWGTTGLVGRHKFSDVTGKLKLKQEYFIPPRGWEWES
DWFIDPEKALLTEADAGHTEFMDEVFQNETRFPGGEWKAASEQYTDVNGEKSRNPSEFDC
PPGWIWEDSWTVDVNRAVDDQGWEYGVTIPPDDKPRSWVPAEKVYHVHRRRRLVRPRKRD
PSSTGSAVEKRNQGDPEGWEFSSLIGWKFHRKERSSDTFRRRRWRRKMAPEDRLGACAIF
QLEGALGVDTEEKEKTSKANATKVFGANTPTVSCTFDRSYMYHLRVYVYQARNLMSMDKD
SFSDPYAHVSFLHVSKTTEKLKATLNPTWDQTLIFNSVEIYGDPQKIAHRPPDVVLEFYD
EDQVGKDEMLGRSICTPLVKLSPEMDQTPRLLWHPIIQKGQRAGEALIAAELILKDKSDD
SNLPLVPSMRAESLYMVPQGIRPVVQLTAVEILAWGLRNMKPYQLASVSSPSLVVECGGQ
RVETAIIKNMKKSPNFPGNVLFIKVLLPKDEMYTPPIVLKVIDHRPFGRKPVVGQCTIAS
LEEFRCDPYAIVPEGARSSKMALMMASPHKDVAITMEETSPLLEAQLAEKEKETVDWWSK
FYASTGEQDKCGPYLKKGYDTLKVYDSELENVPEFKGLTDFCNTFKLQRGKNDNGDDDPT
VVGEFKGAFKVYPLPDDPGVTTPPRQFRELPESGPQECLVRIYIIRGIDLQPKDNNGRCD
PYIKLSVGRNSIEDRDNYLPNTINPVFGRMFEMTCFLPQDKDLKISVYDYDLLTRDEKVG
ETVIDLENRFLSRYNSYCGLPQTYCLSGVNQWRDQLKPSQILENLARLKGLSKPRTEDNG
TSLTFNGKDYTLAQFENNKEIHQHLGPAYERLCLHVLRTQGLVPEHVETRTLYSSFQPNL
SQGRLQMWVDVFPKTIGLPGPPFDITPRKPKKFFLRAIIWNTTDVTLDETSITGERMSDI
YVKGWMPGMEEDKQKTDVHYRSLDGDGNFNWRFVFGFDYLPAEQLCLVSRKEHFWSLDKT
EFRIPPKLTVQIWDNDKFSLDDYLGTVELDLHKLVAPSKTPEKCSLQLLDKQETGGQRKV
DNTKSLFAQQAVRGWWPCAIEQDGKKVLGGKVEMTLEIISDADAEERPAGKGRDEPNMNP
RLDPPNRPDTSFFWFTNPCKTMKFIVWRRFRCLFIALIILTIVILFLAILLYSLPNYISM
KIVKPLQ
NT seq
6684 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggtggtcgtggagtcagccaaaggactccccaagaagaaactggggagtcct
gacccgattgccacagtcatatttaaagatgacaagaagaaaaccaaatcgattaacaat
gaactgaatcctgtatggaatgaggtgctggagtttgacctgaaaggctcgccgctggac
gccggctccttcctggaggtggttgtgaaagactatgagaccatcggcagaaacatactt
attggttcagccaaaatcccgttgagagatctcgcctccggtcaattgagatccctgccg
tcgaaaaatgttcctttgcttggtgaaaatgggcagaatattggggctactatcaatctc
gtggtggcctacgaccctccagcaaatgctgcgccaaaccccaacaatcctccagccggg
gatgcgaccgtagatggaggtgaagctggaagtgatgagaatgaaggcgagacgaccaca
gatttgggtcaaagcggctctgccggagtctccttaccaaaaaaaacgtccgccaatgtt
cgccagcggctgacgagaggacagagtcgccatcgactcgccaataagcctcaagacttc
cagttcagacttattggttcagccaaaatccctttgagagatctcgcctccggtcaattg
agatccctgccgtcgaaaaatgttcctttgcttggtgaaaatgggcagaacattggggct
actatcaatctcgtggtggcctacgaccctccagcgaatgctgcgccaaaccccaacaat
cctccagccggggatgcgaccgtagatggaggtgaagctggaagtgatgagaatgaaggc
gagacgaccacagatttgggtcaaagcggctctgccggagtctccttaccgaaaaaacag
tccgccaatgttcgccagcggctgacgagaggacagagtcgccatcgactcgccaataag
cctcaagacttccagatccgtgttcgcgtcgttgaagcccgtcagttgcctggcaacaac
atcaaaccggtggtgaaggttcatgtgtgcggccaaactcacagaacaagaatcaagagt
ggaaacaatcctttctttgatgagatgttcttctacaacgttaacatgcttccagctgat
ctctttgagcagagcatcagcttcagggtgtataactcgtattcgctgagggccgacagc
ctgatgggagaattcaagctggatgtcggatatgtttatgatgaaccagcccattgtgtc
atgaggaaatggcttctgctgaacgacccagacgacagcagctccggcgctaaaggttac
ctcaaagtcagcctgttcgtcatcgggaccggtgacgagccgtcggtggagaagagggat
tgtgatgacgaccaggatgacatagagagtaatctgcttctgccggcgggcgtgacgctg
cgatgggccacgctgtcactgaaggtcttcagggccgaggacattcctcaaatggacgac
gcatttgtccagagcataaaagagatttttggagcagatgaaaacaagaagaatctggtc
gatcccttcctcgaggctcgcttcgctggcaagaagctgtgcactcaggtcatagagaag
aacgcaaacccagagtggaaccaagaactgaaccttcaagtcaagttcccgtccatgtgt
gagcgcgtcaagctgaccgtctttgattgggatcgtctgacaggaaatgacgctgttggg
accacatacctggacctggcaaagatcgcttcatctggtggagagactgaagaagaacat
gctggaaacgctgacagaccgtcctatgaaggttcatccatttttatgcttattacagag
ttctgtaaactttcttttcatcgtagggatcgtctgacaggaaatgacgctgttgggacc
acatacctggacctggcaaagatcgcttcatctggtggagagactgaagtgaaccccgta
gaatctgaggtgggtttcctgccggtgtttggaccctgctacatcaacctgtacggcagc
cccagagagttcacgggcctgccagatccctatgaggacctcaactttggcaagggagaa
ggcgtggcctaccgaggccggatattggtcgagctgtccacaaaactggatgagaaagca
gaaaaagcaatagataatatccacagtgacgacatcctggttgcacagaagtaccagagg
aggagaaagtactgtctctgcgcagtcttccacagcgcctccatgatccaagaacccgga
gaaccgatccagtttgaggtcagcatcggtaactatggaaacaaactggacaccacctgc
aaacctctagcctccactacccagtacagctgtgccgtgttcgatggtaaccagtactac
tacctaccgtgggcaaacaccaaaccagtggttgtgctgacgtccttctgggaggacatc
agtcaccgcctgaacaccgtcaacatcatcctctacataactcagcgtctgcaatccaac
ctggaggcgtttaaagttgccattttggctaaagtcccggacaacaaacttgtagaggtg
tggctgcagctgcttgatcagctggttgaagatctggaaagatttccaacacctgagttg
gagggctgccccaacctgacatcgttggacatccaaatgaaaaagctgagagacatcacc
ttaaacggcatcaaggaagctgtgaaccgtatgagacaagaggcctccgagatccgtgac
actctgtccgacatagaaacctggcttgacaaactcaaacagcttgctgaggagccacaa
aacagcatgcccgacgtggtcatctggatgctgcgaggggagaaaagagtggcgtacagt
cgtattccagctcacgaaatcttgttttccacatacagcgagcaggcctgcggacaaaac
tgtggcaaaactcagactgtctttctaaagtatcccatggacaaggcaaaaggattgaag
gtgccagttcagattcgagtcagcatgtggctgggcctttctacggaggagaaaaagttc
aactcgtactcagagggaacgttcagcgtgtttgccgagctgtatgaaaaccaggccaag
gtcttcgggaactggggaaccacaggactggtggggcgccacaagttttccgatgtcacg
ggcaaactgaagctgaaacaggagtacttcattccacccagaggatgggagtgggaatct
gactggttcattgatccagaaaaagctcttctcacagaggcagacgcaggacacactgag
ttcatggatgaggttttccaaaatgaaacccgcttccctgggggagagtggaaagctgca
tctgagcaatatactgatgtgaacggagagaagagccgtaacccctcagagtttgactgt
cctcctggttggatttgggaggacagctggactgtggatgtcaacagagccgtggatgac
caaggttgggaatacggagtgaccatccctccagatgacaagccccggtcctgggtcccg
gcagagaaggtgtaccacgtccaccgcaggaggaggctggttcgacctcgcaaaagagat
ccgtcctctacaggatcagctgtggagaagagaaatcaaggcgaccccgagggctgggaa
ttctcttctctgattggatggaagtttcacagaaaagagcgttcgtcagatacgtttcgc
cgaagacgctggaggcggaaaatggcaccagaagatcgacttggggcttgtgccatcttt
cagctggagggagcgctgggcgttgatacagaagagaaggagaaaacctccaaagccaac
gccaccaaagtgtttggcgccaacacccccactgtgtcatgcacatttgacaggtcatac
atgtaccatctccgtgtctacgtctaccaagcaagaaatctgatgtctatggataaagac
agtttctcagatccctacgcacacgtgtctttcctgcacgtcagtaagacgacagagaaa
ctcaaagcaacgctgaacccaacctgggaccagactctgattttcaacagtgtggagatt
tacggggatcctcaaaagatcgctcaccgtcctcctgacgtggtgttggagttctacgat
gaagaccaagtgggaaaggatgagatgctcggccgcagcatctgcaccccactggtgaag
ctgagtccagaaatggaccagactccccggctgttgtggcatcccatcatccagaagggg
cagagggctggagaagcactgatcgctgctgagctcatcctaaaagacaagtcagatgat
tccaaccttcctttggttccttcgatgagagccgagagcctctacatggttcctcagggc
attcggcctgtggtgcagctcactgcagtggagatccttgcttggggtctgaggaacatg
aaaccttatcagctggcgtccgtgtcctcacccagcctcgtggtggagtgtggaggccaa
agagtagagacggcaatcatcaagaacatgaagaagagtcccaactttcctggcaacgtc
ctcttcatcaaagtgctcctcccgaaggatgagatgtacacgcctcccattgtgctgaag
gtgatcgatcaccgtccgtttggcaggaagcccgtggttggtcagtgtacgatcgcgtct
ctggaggagtttcgatgcgacccgtatgccatcgttccagagggagccagatcttccaaa
atggctcttatgatggcgtcccctcacaaagacgtcgccatcaccatggaggagacaagc
cccctactggaggctcagcttgccgagaaggaaaaagagacggttgattggtggagtaaa
ttctacgcttcaacaggcgagcaggacaaatgcggcccctacctgaagaaaggatacgat
acgctgaaagtttacgacagtgaattggagaatgtcccagaattcaaagggttgaccgat
ttctgcaacaccttcaaactgcaacgcggcaaaaatgacaatggagacgatgaccccacc
gtggtcggagagttcaagggtgccttcaaggtttaccccctccccgacgatccgggtgtt
accaccccaccccgtcagttcagagagcttcctgagagtggacctcaggagtgtctcgtc
aggatatacattattcgggggatagacctgcagcccaaagacaacaacggccgatgtgat
ccgtacataaagctctcagtggggaggaactcgattgaagacagagacaattacctcccc
aacacgataaaccctgtctttggaaggatgttcgagatgacgtgtttcctcccacaagac
aaggacctgaagatctccgtctacgactacgatctgctgactcgcgacgagaaagttggc
gagacggtgatcgacctggagaaccgcttcctgtcccgatacaactcctattgtggtctt
cctcaaacctactgcctttctggtgtcaatcagtggagggaccaactgaaaccgtctcag
attctggagaacttggcccgattgaagggattgtctaaacccagaactgaagacaacggc
acgtcgctcacgtttaatggaaaggattacactttggctcagtttgagaacaacaaagaa
attcatcagcacctgggtccagcctacgaacgtctctgccttcacgtgctcagaacgcag
ggactcgtccccgaacacgtggagaccaggactctctacagcagctttcaacccaacctc
tcccaggggaggcttcagatgtgggtcgatgtcttccccaaaactattggacttcctgga
cctccctttgacatcacaccacgcaagccaaagaagtttttcctgcgtgctatcatctgg
aacaccacggacgtgaccctggatgagaccagcatcaccggagaacgcatgagtgacata
tatgtcaaaggctggatgcccggtatggaggaggacaagcagaagaccgacgtccactac
aggtccctggatggagacgggaactttaactggcgcttcgtttttggctttgactatctg
ccagccgaacaactctgcctggtttccaggaaggaacacttttggagtctggacaaaacg
gagttcaggattccccccaagctaaccgtgcagatatgggacaacgacaaattctccctg
gatgattacctcggtactgttgagctggatttgcacaagctggttgctccttcaaagact
ccagagaaatgttccctgcagctgttggataagcaggaaacaggaggacaacgcaaggtg
gacaacaccaaatctctgtttgctcagcaggcggtccgaggctggtggccgtgtgccatt
gagcaggacgggaaaaaggttctcgggggtaaagtggagatgactctggagatcatcagt
gacgcagacgcagaggagagacctgcaggaaaaggaagggatgaacccaatatgaacccg
cggctggaccctccaaatcgcccagacacgtccttcttctggttcaccaacccctgcaag
accatgaaattcatcgtatggagaaggtttagatgcctcttcatcgccctcatcatcctc
accatcgttatcctcttcctcgccatcctgctgtactctctaccaaactacatctccatg
aagattgtgaagccccttcagtaa
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integrated database retrieval system