Oryzias melastigma (Indian medaka): 112154405
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Entry
112154405 CDS
T07439
Name
(RefSeq) cadherin-1-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04371
Apelin signaling pathway
oml04514
Cell adhesion molecules
oml04520
Adherens junction
oml05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
112154405
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112154405
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112154405
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112154405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112154405
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112154405
04090 CD molecules [BR:
oml04090
]
112154405
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
112154405
Cell adhesion molecules [BR:
oml04515
]
Cadherins
Major cadherins
112154405
CD molecules [BR:
oml04090
]
Proteins
112154405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
112154405
NCBI-ProteinID:
XP_036073110
LinkDB
All DBs
Position
LG19:complement(22798301..22813015)
Genome browser
AA seq
673 aa
AA seq
DB search
MGPGADEDPVGLFTMDKNTGDLYVHQRLDREKQANYKLMAHAAAESSTAEDPMEIIINVI
DMNDNRPIFEKSSYVGEVAEFSPKGTTVIQVKATDADEPGNDNSIIKYTILSQEPKLPND
HMFAIDTMNGAIMVEYAGLDREMYPEYTLEIQAADMKGEGLTRKTKVVLKVTDSNDNAPV
FTESTYQGSVDENAVGVQVIKLSVTDKDEQNTPTWNAKFKIISGDPEKLFSIETGSNKHE
GIIKTAQGLDFEKSRTHTLSVIVENDVPFAVEVTTSTATVVVTVKDVNEPPVFKEQEMFV
QKSEDLPVNSVITNCEAVDPDFARENTVKYKIIDDPEGWLKVDEDTGLVKVKTLMDRESI
RVTDNKYTALIGAYDNDPVPATGTGTLIITLKDVNDNAPVIEERKAMVCKKARIPTLLTV
LDKDEAAHSSPYNVAVHEKFQANWTAQMNKTRTGIELSLKKSDIPTGIYKVILTVADRDN
LEQDSSINVEVCDCAENGVCLGFRIFGEEAMPSYIWGTLGAVLLLLVIAILGLYVYKRHK
GQQKEDEKDKLLKDELMRDSIFHYAEEGGGEDDQDFDLSVLHYGLDNKPDVLRSDMMPST
MSRPTYRTLPANPDEIGNFIEDNLKAADEDPTAAPYDSLLVFDYEGGGSDAGSLSSGNSS
NNFYAICRIWNNQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaggagctgatgaagatcctgtaggactctttacaatggacaaaaacaccggg
gacctctatgttcatcagagactcgacagagagaaacaagcaaattataagctgatggca
catgctgctgctgagtcgagcactgcagaggatcccatggaaattatcatcaatgtaatt
gacatgaatgacaacagacctatttttgaaaagtcatcctatgtgggagaagttgctgaa
ttctcaccaaaagggactacagtgattcaggttaaagccactgatgctgatgagcctgga
aatgacaactcgattatcaaatacactattctgagccaggaaccaaagctgcccaatgac
cacatgtttgcgattgacaccatgaatggagccatcatggttgaatatgctggtttggac
agagagatgtatcctgagtacactctggaaatacaggcagcagatatgaaaggagaagga
ttaactagaaaaacaaaagtagttttgaaagtgacggacagcaacgacaacgctccagtc
tttactgaatctacttatcagggatcagttgatgaaaacgcagtgggggttcaggttatt
aaattgtcagtaactgataaagatgaacagaacaccccaacatggaacgccaagttcaag
attatcagtggagatcctgagaagttgttttccatagaaacaggatccaacaaacacgaa
ggaatcatcaaaactgctcagggactggactttgagaaaagcagaacacacactctatct
gttattgtggagaacgacgttccttttgccgttgaagtgaccacctccaccgccacagtg
gtggtaaccgtgaaggacgtcaacgagcctccagtctttaaagaacaggagatgtttgtt
caaaagtctgaggaccttcctgtgaacagtgtgatcacaaactgtgaggcagtagaccca
gactttgcacgtgaaaacactgtgaagtataaaataattgatgaccctgaaggctggctg
aaagtggacgaggatacagggctggtgaaggtgaaaactctcatggacagagagtctatt
cgtgtgacggacaataaatacacggcgctcatcggtgcttatgacaacgatccagtccca
gccactggaactggcacgttgatcattacgcttaaagatgtcaacgacaacgccccagta
attgaagaacggaaagcgatggtttgcaagaaagctcgcattcctacactgctgactgtt
ttggacaaagacgaagccgctcattcttctccttataatgtggcggtacatgagaagttt
caagccaactggacggcacagatgaacaaaaccagaaccggaattgagttgtctttgaaa
aagtctgacattcctacaggaatttacaaagtgatcctgactgtcgcagaccgcgataac
ctggagcaagatagctccataaatgtagaagtgtgcgactgtgcagaaaatggagtttgt
cttgggtttagaattttcggtgaagaagcaatgccatcatatatttggggaacacttgga
gctgtgctgctgctgctggtaattgcgattttgggattgtatgtatacaaaagacacaag
ggacaacagaaagaggacgaaaaggacaaactacttaaggacgaactaatgagagacagc
atcttccactacgctgaggaaggaggtggagaagatgatcaggactttgatctgagcgtt
ctccactatggcctcgacaacaaacctgatgtattgcgaagtgacatgatgccttcgacc
atgtcccgccccacataccgaactttgcctgctaacccagatgaaattggcaacttcatt
gaggacaacttgaaggcagcagatgaagaccctaccgctgccccctacgactctctcctg
gtgtttgactacgagggtggaggctcggacgctggaagcctctcatctgggaactctagc
aacaatttctatgcaatatgtcggatatggaacaatcagtga
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