Oryzias melastigma (Indian medaka): 112154416
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Entry
112154416 CDS
T07439
Symbol
dhx32a
Name
(RefSeq) DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32a
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112154416 (dhx32a)
Enzymes [BR:
oml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112154416 (dhx32a)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
112154416 (dhx32a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
112154416
NCBI-ProteinID:
XP_024141085
Ensembl:
ENSOMEG00000010746
UniProt:
A0A3B3BVF1
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All DBs
Position
LG19:complement(12557987..12564345)
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AA seq
729 aa
AA seq
DB search
MSTSEEFSADSEECPGEDCAGFGDDLELNQFDGLPFSSRYYKLLKERKTLSVWEVRSQFE
ESLVNNQVVVVSATAKSGRSTQIPQWCAEFCLSAQYQHGMVVCTQTNGQQAVDLALRVAD
EMDVNIGHEVGYTIPMETCCSSDTVLRYYTDDMLLREMMSDPFLEQYGVVVIDQAHERTV
STDILLGLLKDILLQRPELRVVVLTLPSMTKKLLRHYGGVPLISLEASSPAEVVCSNSSS
KDYFLSALRLVLDIHRTKESGDVLVFLASEEEVSRACSILQSESSRLRGNLDQLVPVILC
SSQRELMTEQSSSTKSRRVFLCMQQWEDVWCTPQSVSFVVDTGLQKKMVYNPRVRAYSEV
LQPVSRCQADIRKQLSAPAGKCFCLYSEDGLTETPPQILESNFTPTALFLKRMEIAGLGR
CHFIDRPDPESLMQALEELDYLAALDDDGNLSEIGIIMSEIPLEPQMAKALLASCEFDCV
SEMLTIAAMLSAPSCLLKPSSGMSHEAARCRAAFQHPEGDHFTLINIYNAFKQSQREPHV
TPEKWCQDRFLDHSALKTADVIRSELTDTLNRIELPISEPSFGTKTNTCSIKRALLAGFF
MQVARDVDGSGNYFILSHKHMAQVHPLSCYGAQSHKLGLPEWLLFNEYTLSENNCMKTAS
QISPQMFLQMAPLYYFYNLPPSESKDMLQELLDSEGCSNCKEKTRAAGMSSDANGCAAAT
QTQDRCAIM
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacttctgaggagttttccgctgacagtgaggaatgtccgggtgaggactgcgcc
ggctttggagacgatctggagttaaatcagtttgatgggttgcctttttcttctcgttac
tacaaacttctgaaggagaggaagactctgtccgtgtgggaggtcaggtcccagtttgag
gagtctctggttaacaaccaggtggtggttgtgtctgcaactgcaaaaagtgggaggagt
acacagatccctcagtggtgtgcagagttctgcctgtctgcacagtatcagcacggcatg
gttgtgtgcacgcagaccaacgggcagcaggcggtggatctggccctgcgcgtggctgat
gaaatggacgtgaacatcggccatgaagtgggctacaccatccctatggagacctgctgc
tcctctgacactgttctgaggtactacactgatgacatgttgctcagagagatgatgtca
gacccgttcctggagcagtacggagtcgtcgtcattgaccaggcccatgagcggacggtc
agcacagacatactgctgggtctcctgaaggacatcctgctgcagcggcctgagctccga
gtcgtggttctcactcttccctccatgacgaagaagctcctcagacactacggcggcgtc
ccgctcatcagtctggaagcctcgtctcctgccgaggtggtctgcagcaacagcagcagc
aaagactacttcctgtcagcactcaggctggtgctggacatccatcggaccaaagagagt
ggagacgttctcgtgtttttggcctccgaggaggaggtttctagggcatgcagcatcctg
cagagtgaaagctccaggttgagagggaatctggaccagttggtgcctgtaatcctgtgc
tcaagccagcgagagctcatgactgagcagtcaagctccacaaagtccaggagggttttc
ctgtgcatgcagcagtgggaggacgtgtggtgtaccccccagtctgtgagcttcgttgtg
gatacggggctccagaaaaaaatggtttacaatccaagagtgagggcttactctgaggtc
ctgcagcccgtcagtcggtgtcaggcggatattcggaagcagctctctgcaccggcaggt
aaatgtttctgcctgtattctgaggacggcctgacagagaccccccctcagatcctggag
tccaacttcacaccgacagctctcttcctaaagaggatggagatcgcaggactcggacgg
tgtcatttcatcgacagaccagatccagagagtctgatgcaggccttggaggagctggat
tacctcgctgccttagacgacgatggaaacttgtccgaaatcggcatcatcatgtctgaa
atccctctggaacctcagatggccaaagctctgctggcgtcctgcgagtttgactgtgtg
agcgagatgctgacgatcgccgccatgctgtcagcaccaagctgcttgttgaaaccatcc
tctggaatgagccatgaagcggcccgctgccgtgcagcgtttcagcaccctgaaggcgat
cacttcaccctcataaatatctacaacgctttcaagcagagccagagggaaccacatgta
actccggaaaaatggtgtcaggaccgttttctggatcattctgccctgaagacggctgac
gtcatccggtcagagctgaccgacactctgaacaggatcgagcttccgatatcagaaccc
tcctttggaaccaagacaaacacttgcagcattaaaagagctctgttggctggattcttc
atgcaggttgctcgagatgtggacggatcaggaaactactttattctgtcccataagcac
atggctcaggtccacccgctctcctgttacggagctcagtcccacaaactggggcttcca
gagtggctgctttttaatgagtacaccctgtcagaaaacaactgcatgaaaacagcctca
caaatttcccctcaaatgttccttcaaatggcacctctgtactacttctacaatctgcct
cccagtgagagtaaagacatgctgcaagagctgctggactcagaaggatgcagcaactgc
aaagaaaagacccgagctgcaggaatgagcagcgacgcaaacggctgcgcagctgcaacg
caaactcaggacagatgtgcgattatgtga
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