Oryzias melastigma (Indian medaka): 112154422
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Entry
112154422 CDS
T07439
Symbol
sgca
Name
(RefSeq) alpha-sarcoglycan
KO
K12565
alpha-sarcoglycan
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112154422 (sgca)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
DUF3377
TMEM154
Motif
Other DBs
NCBI-GeneID:
112154422
NCBI-ProteinID:
XP_024141095
Ensembl:
ENSOMEG00000006396
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Position
LG19:15798225..15801806
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AA seq
397 aa
AA seq
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MAGWGSGLFFLTVCAASLFGARAEFKFTIFVGKLFTYELMRETFQSDLDPQGKLYAGSLY
DDPIIFKCKQQNFPDLPEWLRFIQRHPNDNGFLYGTPTAPGKSIIEVYAVNKRSYNTAKQ
TLVIKIVEAKMLPYQAEFFIALREIERVLPPSVQNEIKLDLQNLWNSESLEIVNMTNALD
RGGRVPLPIAGHYEGVYVKVGSHKYFSECLLRVLKPEHQRQCAAEPRAKRPGGCNFCSIP
SNCITWCKTKLFDLTKLEPEPPAPTMGSGVLEAGGDFSPPDSPPSTDYFPDYMVTVIVPL
ILAIVLCLLLAYIMFGRREGVEKRNARTDQIQLYHHYTIHGNADELRGMAGSRDGPPPLS
TLPMFNSRTGDRASPLHSDDIPLIMAEQDPYSDTLPR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctgggggagcgggctcttctttctaacagtttgtgctgccagcttgtttggg
gccagagcagagttcaagtttactatatttgtggggaagttattcacatatgagttgatg
agagaaactttccagagtgacttagacccacagggaaaactttacgctggaagtttgtat
gatgaccccataatatttaagtgcaaacagcagaatttcccggacctgccagagtggctg
cgcttcatccaacggcaccctaacgataacggctttctgtacggcaccccaactgcccct
ggaaagagtatcatcgaggtgtacgcagtcaacaaacgcagctacaacactgcaaaacaa
actctggtgattaaaatcgttgaagcaaagatgctgccctatcaagctgaattcttcatt
gctctgcgggagattgaacgagtgctgcccccttctgttcagaatgaaatcaagctggac
ttgcagaacttgtggaactcagagagcttagaaatcgtgaacatgacgaacgccctcgac
cgtggcggcagagtccctctccctattgcaggacactacgaaggagtctatgtgaaggtg
ggctcgcacaagtacttctccgagtgtcttctgagggtcctgaagccagagcaccaaagg
cagtgtgcagcagaacccagagctaagaggccgggaggatgcaacttttgctccataccc
agcaactgcatcacctggtgcaaaaccaaactgtttgacctcaccaagctggagccggag
ccgcctgctcccacgatgggctccggggttttagaggccggaggagacttcagtcctccc
gattctcccccaagtacagactacttcccggactacatggtgacggtgatcgtgcccttg
attctcgccatcgtcctctgtctgctgctggcttacatcatgtttgggaggcgagagggc
gttgagaaacgaaacgcaaggacagaccagatccagctctaccaccactacaccattcat
ggtaacgcagacgagctgcggggcatggctgggagccgggacgggccccctcccctctcc
acgctgcccatgttcaacagccgaacaggagacagggcttcaccgctgcattctgacgac
atccctctcatcatggctgagcaggatccttacagtgacactcttcccagatga
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