Oryzias melastigma (Indian medaka): 112154451
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Entry
112154451 CDS
T07439
Symbol
celsr1a
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 1 isoform X1
KO
K04600
cadherin EGF LAG seven-pass G-type receptor 1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04310
Wnt signaling pathway
oml04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112154451 (celsr1a)
09133 Signaling molecules and interaction
04519 Cadherin signaling
112154451 (celsr1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112154451 (celsr1a)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oml04030
]
112154451 (celsr1a)
04515 Cell adhesion molecules [BR:
oml04515
]
112154451 (celsr1a)
Peptidases and inhibitors [BR:
oml01002
]
Mixed peptidases
Family P2
112154451 (celsr1a)
G protein-coupled receptors [BR:
oml04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
112154451 (celsr1a)
Cell adhesion molecules [BR:
oml04515
]
Cadherins
Major cadherins
112154451 (celsr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
7tm_2
Cadherin_CELSR2_9th
Laminin_G_2
GAIN
GPS
Ig_CLSTN
Cadherin_FAT4_N
Laminin_G_1
EGF
Ig_Cad99C_N
EGF_laminin
EGF_TEN
hEGF
Dicty_CAR
PepSY
Motif
Other DBs
NCBI-GeneID:
112154451
NCBI-ProteinID:
XP_024141169
LinkDB
All DBs
Position
LG23:6326523..6442328
Genome browser
AA seq
3104 aa
AA seq
DB search
MELPLCWVWILLTAPLLGCLEMHLPETLQPGSLLANLSLGSGWTYQMDRTLSSKLVQSFL
QVETQRGGIRLSRRVQCARAPRNPAPVYFRAGSSASGDVVLTRFNVFVHGQDCFIKYKRK
KLSPEPDIDIKHHLRVEESSCLHAGKLLLNVTELLPTFVRSIALLDSECVGQDLGGVFRR
GDLFLISDLCLELIRKPEVNLHCALHSSPGSRLTVHLSVTLTLPRHGSVSQTPHNMSGIL
IPRRKRQVNMPPQFQLPNYQVSVPENEPAGTRVITLKATDPDDGEAGRLVYSMEALFDKR
SSDFFEIDPQTGSITTIQALDREVKDTHVFKVLVIDNGTPQRSAASYLTVTVSDTNDHVP
VFEQNNYRVSIRENVEVGFEVMTVRATDGDAPSNANMIYKIVNDDKVNSVFEIDARSGLV
RIRERPDRETRARYKLIVEANDQGKDPGALSATATVHISVEDENDNYPQFSEKRYIAQVL
ENVAVNTKIIQVEATDKDEGNNAKVHYSIISGNVKGQFYIHSPTGVIDVINPLDFEVTRD
YNLRIKAQDGGRPPLINSTGMVVVQVVDVNDNAPMFVSTPFQATVLENVAIGYSVIHIQA
IDGDSGENARLAYRLTDTTPGFPFTINNSTGWITVSEELDRETTDHYSFVVEARDHGVPV
MSSTADVAITVLDVNDNVPTFTERTYSLKINEDALVGTSVLTVTAVDRDVNSVVAYQISS
GNTRNRFAITSQSGGGLITLALPLDYKQERQYVLTVTASDGTRYDNAQVFINVTDANTHR
PVFQNSNSPVVLIEGSPIGSTVVVISATDEDTGENARITYIMEDNIPQFKIDPDTGAITT
QMEVDYEDHASYTIAIIAKDNGIPQKMDTTYVEIIILDANDNTPQFLRDRYQGSVFEDAQ
VRTSVLQISASDRDSGTNGRVSYTFQGGDDGEGDFSIEPYSGIIRTARKLDRENVPVYNL
KAFAVDGGVPPLKAAVSIHVVVQDINDNAPVFEKDELFIDVEENSQVGSIVAQITATDPD
EGTNAQIMYQIVEGNFPEVFQLDIFTGELTALFDLDYEEKTEYIIVVQATSPPLVSRATV
HIRVVDMNDNQPVLQDFEIIFNNYVTNKSNSFPSGIIGKVPAHDPDVSDKLRYTFESGNE
LNLLLLNEDTGELRLSKDLDNNRPLEAQMKISVTDGLHKVEAHCTLRVTIITDDMLTNSI
TVRLENMSQERFLSPLLGLFLEGVATVLSTKREEVFVFNIQNDTDVQGSILNVTFSALQP
GGSPGKGTFFPSEDLQEQIYLNRTLLRTISSQEVLPFDDNICLREPCENYMKCVSVLKFD
SSPPFIASDTVLFRPIHPINGLRCRCPLGFTGDYCETEIDLCYSGPCQNRGRCHSREGGY
TCECLEDFTGEHCELNASSGRCVPGVCKNGGECVNRLAGGFMCQCPPGEYQKPYCEMTTR
SFPGQSFVTFRGLRQRFHFTVSLMFATRERNALLLYNGRFNEKHDFIALEIIEEQIQLTF
SGGERKTKVAPYVPHGVSDGQWHSVQLHYYNKDGGSLVDSSGGLRVPLYTAWLELDQKEP
NIGRLGTPHGPSAEKVAVVAVDDCDISMAIRFGKQIGNYSCAAQGTQTGQKKSLDLTGPL
LLGGVPNLPEDFPVRNRNFVGCMRDLKIDSKMIDMASFIANNGTTPGCPAKKDFCSNAVC
VNGGVCVSKWNTHSCECPTGYGGKNCEQEMPSPQFFDGQAFVSWTEPDITVTVPWYMGLM
FRTKQSFGTLMQVNAGPSSTVNLMVSEQQVRMEVLLRQKLLASLSFPQVRVSDGEWHHLL
VELRSIKDGKDIKYMAGVSLDYDMYQKSVEIGNDLPGLKLQTLHVGGLPGDKNRVKRGFV
GCIQGVRMGETPTNVANLNMAQGLKIRVEDGCDLADPCDSNICPENSHCHDDWITHTCVC
NPGYFGKDCMDACQLNPCEHVSTCVRKPSSSHGYICECGQDYYGQYCENKVEKPCPSGWW
SSPVCGPCNCDTSRGFHKDCNKTTGECRCKDNHYRPEGDDTCYPCECFHEGSESRTCDPV
TGQCPCKGGVIGRQCNRCDNPFAEVTPAGCQVVYEGCPKAFDAGIWWPKTKFGLPAAMDC
PRGSIGKAIRHCNDEKGWLSPELFNCTTDTFSHLRKLMDGLHRNVSRMDSEHSKKIVRLL
RDATNSTPHYYGNDVKTAALLLNKVLQYESRQAGFELTAMKDAEFNENLVRAGSAILDPN
TKEHWDQIQRSDGGTARLLRSFEEYANTLAQNVRKTYLKPFTIVTDNMILTVDYLDVSDP
LRATLPRFQDIQESFPKELGSSVRFPRFNAHTQVQKGTGEVTPAPPAETTPPQEEEEEEH
TVSNRKRRHLEPPAPLPVAVVIVYKSLGQLLPERYDPDRRSLRLPSRPVINTAIVSATVH
TEDAPLPPVLDPPITLQYTLLETEERTKPVCVFWDHSITNGGGWSSKGCEVLNRNNSHIS
CQCNHMTSFAVLMDISKRERGDFLPLKIVTYTTVLVSLVLLLLTFLLLCLLRRLHSNLLA
IHRNLVATLFFSELVFLLGINQTDNMFVCTVIAILLHYFYMCTFAWMFVEGLHIYRILTE
LRNINQGHMRFYYAMGWGIPAIITGLAVGLDPQGYGNPDFCWLSVHDTLIWSFAGPIFVV
VLINIVIFILAAKASCGRRHKAAEKSEAIRALRIAFPLLLLISATWMLGLMAVNSNVMLF
HYLFAVFSCLQGVFIFFFHVILNKKVRENIKNVLTGKKSIQDESSTTRGSLLTRSLNCNN
TFPEDGQLYRSAIGESNVSLDSTLRSAKSRSSYLAYTFREESAQKPSVSSGTAKGHTDLD
GPLFHKGANKGDDSDSDSELSVDEHSSSYASTQSSDSEDEDLDVKPKWNNERPLHSTPKG
DSGSNHVKTYWPTEATTASDSEELGGPDKLRVETKVNVELHPENKLNHVGERERETLLER
AKQTPTNPKDTAPVNQPNSNSNHQPEQRKGILKNKNIYPPPLADKNMKNRLREKLSDYNS
PTITSPPSMNNNTSSPPPSSVNIMSPSSRPSSQASNEGGGRLGNHDSTPVVKPPIAPRPQ
IPVGAPPATIYRETNGGTAMHLKSGTVNGGNESDSEDFETSPPL
NT seq
9315 nt
NT seq
+upstream
nt +downstream
nt
atggagctgccgctgtgctgggtttggatcctcctgacggctccgcttctgggatgtctg
gagatgcaccttccggagacgctgcagccggggagccttttggcaaacctgtcgctcggg
tctgggtggacttatcaaatggacaggactttatcttcaaagttggtccagagctttctc
caagttgagacgcagcgcggggggatccgcctgtcccgcagagttcagtgtgcgcgcgcg
cccaggaacccagcgcccgtgtatttccgagcaggttcctctgcgtctggagacgttgtt
ctgacgcgcttcaacgtgtttgtccacggccaggactgctttatcaagtacaagagaaag
aaactgtcacctgagccagatattgacattaaacaccatctgagagtagaggagtcttcc
tgcttacatgcaggtaaattgttattgaatgtaacagaacttttgccaacctttgtgcgg
agcattgctctcttggactctgaatgcgttggacaggacctcggtggggtgttcagacgt
ggggatttgttcctaatcagtgacttgtgtctggaactcattagaaagcctgaggtgaat
ttgcactgcgccctgcacagctctccaggcagccgcttgactgtgcatctgagtgtgact
ctgacactgccccggcacggatctgtatcccaaacgccccacaatatgtctggaatactg
atccccaggagaaagcgacaggtcaacatgcccccacagttccagcttcccaactaccag
gtatctgtacctgaaaatgaacctgctggtacgagggttatcaccttaaaagccacagac
ccagatgatggagaggcagggaggctggtctacagcatggaggctttgtttgacaaaagg
tcaagcgacttttttgaaattgacccgcagacggggagcataacaaccatccaagcgctt
gacagagaagtaaaagacacccacgttttcaaagttttagtgatagataatggaaccccc
caaagatctgctgcttcctatctcacagtcactgtgagtgacaccaacgaccatgtccca
gtttttgagcaaaacaattaccgcgtcagcatccgagaaaacgtggaggttggctttgaa
gtgatgacagtccgtgctacagatggcgacgctccctccaatgctaacatgatttataaa
attgtgaatgatgacaaagtcaactctgtgttcgaaattgatgcccggagcggcctggtg
aggatcagagagcggcccgacagggagaccagggctcggtataagctgattgttgaggcc
aacgatcagggcaaagaccctggtgccctcagcgccactgctactgttcacatctccgtg
gaggacgagaatgataactacccacagttcagcgaaaagaggtacattgcgcaggtccta
gagaacgttgcggtcaacacaaaaatcatccaggtggaagcgacagacaaagatgaggga
aataatgctaaagttcattatagtatcatcagcggcaatgtaaaagggcagttctacatc
cactcccccactggtgtaattgatgtcatcaatcctctggactttgaggtgactcgggac
tataatctccggattaaagctcaggatggtggccggcctcccctaataaacagcacgggg
atggtggtggtccaagtggtggatgtcaatgacaacgcccccatgtttgtcagtacacct
ttccaagctacagtgctggaaaacgtggccattggttattctgtcatccacattcaagca
atagatggagattctggagaaaatgcccgcctggcgtatcgactcaccgacaccacgcct
ggttttccgttcactatcaacaatagcactggctggattacagtgagtgaagagctggac
agggagaccacggatcactactcctttgtcgtggaggccagagatcatggggtgcctgtg
atgtcctccacagctgatgttgccatcactgtgctggacgtcaatgacaacgtgcccaca
tttacggagaggacttactctttaaagatcaacgaagatgcactggtagggaccagtgtg
ctgacggtgacggcggtggacagggatgtcaacagtgtggtggcataccagatctccagc
ggcaatacacgaaaccgctttgccatcactagtcaaagcggtggcggtctcatcactttg
gctcttcctttggactacaagcaagaacgccagtacgtcttgaccgtcactgccagcgat
gggacgcgctatgacaacgctcaggttttcatcaatgtaacagacgccaacacgcaccgg
cccgtcttccaaaactcaaattctccagtggtgctgattgaggggagccccataggctcc
actgtggtggtgatcagtgcaactgatgaggacacaggggagaatgctcgcatcacatat
atcatggaagacaacattccccagtttaaaattgatccagatacaggtgctattacaact
caaatggaagttgattatgaagatcatgcttcctacacaatcgccatcattgctaaagac
aatggcattccacagaaaatggataccacatatgtggaaattatcatcctggatgctaac
gataatactccacagttcctcagagatcgctaccaggggtctgtttttgaagatgcacag
gttcgcaccagtgttcttcaaatttctgcatcggacagagactccggcaccaatggcagg
gtgagctataccttccaagggggggatgatggagaaggagatttttcgattgaaccttac
tctgggatcatcagaacagctcggaagctggaccgtgaaaacgttccagtttacaatttg
aaagccttcgctgtcgacggaggggtccctcctctgaaagctgctgtttccattcatgtc
gttgttcaggacataaatgacaatgccccagtgtttgagaaggacgagcttttcattgat
gtggaggagaacagtcaggtgggttccatagtggcccagatcactgccactgacccggat
gagggaaccaacgctcagatcatgtaccagatcgtagaggggaattttccagaggttttc
caactggatatttttacaggagaactgactgcgctctttgatctggattatgaggaaaag
acagaatatatcatagtggtccaggccacgtcgccacccctcgtgagccgggccaccgtg
cacatccgagtagtggacatgaatgacaaccaaccagtactgcaggactttgaaatcatt
tttaacaactacgtcactaacaaatccaacagtttcccatcaggaataataggaaaggta
ccggctcatgacccggacgtgtcggataaacttcggtacacgtttgagtctgggaatgag
ctcaacctgctcctgttgaatgaagacaccggggagctgaggctgagcaaagatctggac
aacaacaggcctctggaagcacaaatgaaaatttctgtcacagatggactccacaaagtt
gaggctcactgcactctacgagtcaccatcatcaccgacgacatgctgaccaacagcatc
acggtgcgtctggagaacatgtcccaggagcgcttcctctctccgctcctcggcctcttc
ctggaaggcgtggcgaccgttctgtccaccaagagggaggaagtgtttgtgttcaacatc
caaaacgacacggatgtgcaaggctccattctcaacgtgacgttttcggcgctgcagcca
ggaggtagtccgggcaaagggacttttttcccatccgaggatctgcaggagcaaatctac
ctcaaccggacactcctcaggaccatatcctcccaggaggtgttgccgtttgatgataac
atctgcctgcgggaaccctgtgagaactacatgaagtgtgtgtcagtgttgaagtttgac
agctccccgcccttcatcgcctccgacacggttctgttccgacccatccaccccatcaac
gggctgcgctgccgctgtccgctcggtttcaccggagactactgcgagacggagatcgac
ctctgctactcggggccctgccagaaccggggcaggtgccacagccgagagggcggctac
acctgcgagtgcctggaagacttcacaggtgaacattgcgagctgaatgcgtcttcaggc
cgctgcgtacccggcgtctgcaagaacggcggtgagtgcgtcaaccggcttgctggaggc
tttatgtgccagtgtcctccaggggagtaccagaaaccgtactgcgagatgaccacccgc
agcttccccggacagtccttcgtcaccttcagaggcctgcggcagaggttccacttcacc
gtgtccctcatgtttgccactcgagaaaggaacgctctgctcctttacaacggcaggttc
aacgagaagcacgacttcatcgccctggagatcatcgaggagcagatccagctcactttc
tctggaggagagaggaagaccaaagtggctccttacgtcccccacggtgttagtgacggt
cagtggcactctgtccagctccattactacaacaaggacggggggagtctggtggactcc
agcgggggtctgcgtgtcccgctttataccgcctggctggagctcgatcagaaggagcca
aacatcggacgtctgggcacccctcatggaccctctgcagaaaaggtggcggtggttgcc
gtggacgactgcgacatctctatggccatccgttttggaaagcagattggcaactactcg
tgtgcagcgcagggaacccagacaggacaaaagaaatctttggacctgaccggaccgctg
ctcctcggtggagtccccaacctgccagaggactttcctgtgaggaacagaaactttgtg
ggctgcatgagggacctgaagatcgacagcaagatgatcgacatggccagctttattgca
aacaacggcaccacacctggctgtccggcaaagaaagacttttgcagcaacgccgtgtgt
gtgaatggaggagtgtgcgtcagcaagtggaacacccacagctgtgaatgccccactggt
tatggaggcaaaaactgcgagcaagagatgccgtcccctcagttcttcgatggccaggct
ttcgtgtcctggactgagccagacatcacagtgactgttccttggtacatgggcctcatg
tttcgcaccaaacagtcttttgggactctgatgcaggtcaacgctggaccatcctccact
gtcaacctcatggtgagtgaacaacaggtccgtatggaagttctgcttcggcagaagctg
ctggcgtcgttgagtttccctcaagttcgcgtcagtgatggtgagtggcaccatttgctg
gtggagctgcggagcatcaaagacgggaaggacatcaaatacatggccggagtgtctctg
gactacgacatgtaccagaagtcagtggagatcggaaatgaccttccaggtctgaagcta
cagactcttcatgttggaggtctgcctggagacaaaaaccgtgtaaaaagaggatttgtt
ggctgcatacagggtgtccgaatgggtgagacgcccaccaacgtggctaacctgaacatg
gctcagggcttaaagattcgggtggaagatggctgcgacctagcagacccctgtgactcc
aacatctgccccgagaacagccactgccatgacgactggatcacacacacctgcgtctgc
aaccctggctacttcggtaaggactgcatggatgcgtgtcagctaaacccctgtgaacac
gtgtccacttgtgttcgcaaaccgagctcctcccacgggtacatctgcgaatgcggacag
gactactacggacagtactgcgaaaacaaagtggagaagccgtgcccgtcgggttggtgg
agcagccccgtgtgtgggccctgcaactgtgatacaagcagaggctttcacaaagactgc
aacaaaaccaccggagagtgtcgctgcaaggataatcactaccgtccagagggggacgac
acgtgctacccctgtgaatgcttccatgaaggctccgagtctcgaacctgtgaccccgtc
actggtcagtgtccctgtaaaggaggagtcatcggccgtcagtgcaatcgatgcgacaac
ccctttgctgaagtcacgccggccggatgtcaggtggtgtacgagggctgtcccaaggcg
tttgatgctggtatttggtggcccaagaccaagtttggacttccagctgcaatggattgt
cccagagggtccatcggtaaagctattcgtcactgtaacgatgaaaagggctggttatcc
cctgaactgttcaactgcaccacagacaccttttctcatctcaggaagctgatggacggt
ctgcatcggaacgtctcccgcatggacagcgaacactccaagaagattgtccgcctgctc
cgcgacgccaccaacagcacgccgcattactatggcaacgatgtaaagacggcggcgctg
ctgctgaacaaggtgctgcagtacgagagtcgacaggctggattcgagctcaccgccatg
aaggacgcagagtttaacgagaacttggtgcgagcggggagcgccattctggatccaaac
accaaggagcactgggaccagatccagaggtcggacgggggcaccgctcgtctgctccgc
agctttgaggagtacgccaacacgctggcacaaaacgtcaggaagacctacctgaagccc
ttcaccatcgtcaccgacaacatgattctaactgtggactacctggatgtgtccgaccca
ctgagggccaccttaccgcgcttccaggacatccaggagtccttccccaaggagctcggc
tcctccgttcgattccccaggtttaacgctcacactcaggtccagaaaggcacaggggag
gtcactcctgctcctcctgctgagaccacgccccctcaggaggaggaggaggaggagcac
acagtgtccaacaggaaaaggcgccacctggagccgcctgcccctctacctgtagctgtg
gtgatcgtgtacaagtcattgggacagctgcttccagagagatatgaccccgaccgcaga
agcctcagacttcccagccgtccggtgataaacacggccattgtgagcgccaccgtccac
actgaggacgctcccctgcctcccgtcctggacccccccatcactctgcagtacaccctt
ctggagacagaggagcggacgaagcccgtctgcgtcttctgggaccactccatcacgaac
gggggtggctggtcctcgaaaggctgcgaggtgctcaaccgcaacaacagccacatcagc
tgccagtgcaaccacatgaccagcttcgctgtgctcatggacatctccaagagagagcgc
ggagacttcctccctctgaaaatcgtcacctacaccacagtgctggtgtccctggtcctc
ctcctcctcaccttcctcctactgtgcctcctgcgacgccttcactccaacctcctcgcc
attcaccggaacctggtggccacactcttcttctcggagctggtcttcctgctgggcatc
aaccaaaccgacaacatgtttgtgtgcaccgtcatcgccatcctcctccactacttctac
atgtgcacctttgcctggatgtttgtggaagggctgcacatctaccgcatactgacagag
ctgcgcaacatcaaccagggacacatgaggttctactacgccatgggctggggcattccg
gctatcatcactggtttggcggtgggtctggatccacaaggttatggaaacccggatttc
tgctggctgtctgtgcacgacacgctcatctggagctttgcaggtcccatctttgtggtc
gtcctgatcaacattgtgatcttcatcctggctgcaaaagcttcttgtggtcggcggcac
aaagctgcagagaagtcagaagccatacgtgcgctgcgaatagccttcccccttctgctg
ctcatcagcgccacctggatgctcggccttatggcggtcaacagcaacgtcatgctcttc
cattacctgtttgctgtcttcagctgcctgcagggagtcttcatctttttcttccacgtc
atcttgaacaagaaagtaagggagaacatcaagaatgttctgaccggcaagaagagcatc
caagacgagtccagcaccacgaggggctccctactcacccggtctctaaactgcaacaac
acgttcccagaagatggccagctttaccgctcagccatcggcgagtccaacgtctccctg
gacagcacgctcaggtcagccaagagccgcagcagctacctggcttacacattcagggaa
gagtctgcgcagaagcccagtgtctcttcaggaacagcaaaaggacatacagatctggac
ggaccgttattccacaagggtgccaacaaaggcgacgactccgactcagacagtgagctg
tctgtggatgaacacagttcgtcctacgcctccacccagtcctctgacagtgaggatgaa
gacttggatgtcaaaccaaagtggaacaacgagaggcccctccacagcaccccaaaaggg
gattcggggtccaatcatgtgaagacttactggccaacagaggccaccacagccagtgac
agcgaggaactgggtgggccggacaagctcagggtggagaccaaagtgaacgtagagctg
cacccagaaaacaaactgaaccacgtcggagaacgagagagggagactctactggagaga
gccaagcagacacccacaaacccaaaagacacggcccctgtgaaccagcccaacagcaac
agcaaccaccaaccggagcagagaaaaggtatcttaaagaacaagaacatctaccctccc
ccgctggccgacaagaacatgaagaatcggctgagggagaagctgagtgactacaactcc
cctacgatcacctcccctccgtcaatgaacaacaacacctccagcccacccccatcctcc
gtcaacatcatgagcccctcgtcgcggccttcctcgcaagcctctaatgagggagggggt
cgcctcggcaaccacgacagcactcccgtcgtgaagccgcctatcgccccacgacctcag
attcctgtcggggctccgccggccaccatctaccgggaaaccaacgggggcacggccatg
cacttaaagtcagggacggtgaatggaggcaatgagtccgactcagaggactttgagacc
agcccgcctttgtga
DBGET
integrated database retrieval system
