Oryzias melastigma (Indian medaka): 112154460
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Entry
112154460 CDS
T07439
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03040
Spliceosome
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112154460 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112154460 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112154460 (srsf2a)
Spliceosome [BR:
oml03041
]
Common components
Common spliceosomal components
SR proteins
112154460 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_8
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
112154460
NCBI-ProteinID:
XP_024141190
Ensembl:
ENSOMEG00000007583
LinkDB
All DBs
Position
LG19:complement(13961962..13965720)
Genome browser
AA seq
238 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFV
RFFDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSMYSRRGPPPRRYGGYGRRSRSR
SASPRRRRRSRSRSRSRSRSRSRSRRQYSRSRSRSYSRSRSRSRSRSRSKSRSKSKSRTP
KRSKSKSPSRSRSRSKSKSKAKSPTPPSKRESKSRSRSKSKSKSKSRSKSPEDNAAES
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggaaggcccccgccagacgtggagggaatgacctccctcaaagtggacaac
ctgacttaccgaacttcgccggagactttgcgtcgggtttttgaaaagtacggtcgcgtg
ggtgatgtttatatcccccgggaccgttactccaaggagagccgcggcttcgcgttcgta
aggttcttcgacaagcgtgacgccgaagacgcaatggatgccatggatggcgcgctcctc
gacgggcgagagctgcgagttcagatggcccgctacggtcgaccaccggactcgatgtac
agcaggagaggaccccctcctcgcagatatggagggtacggacgtagatccaggagtcgt
tcggccagcccccgtcgacgcaggcgcagtcgaagccgctccaggagccgaagccgttcc
cgatccaggagccgccgccagtacagccgctccaggtccaggtcctattcccggtcaagg
tcaagatcccgttcgagatccagatccaagtccaggtccaaatccaaatccagaaccccc
aaacggagcaagtcaaagtccccctccaggtctcggtcccgctccaaatctaagtccaag
gccaagagcccaacgccaccatccaagagagagtcgaagtcccgatccagatccaagtct
aaatccaaatccaagagtagatcaaagtctccagaggacaacgcagcagagtcttaa
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integrated database retrieval system
