Oryzias melastigma (Indian medaka): 112154461
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Entry
112154461 CDS
T07439
Symbol
fbxo11b
Name
(RefSeq) F-box only protein 11 isoform X1
KO
K10297
F-box protein 11
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112154461 (fbxo11b)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112154461 (fbxo11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
Motif
Other DBs
NCBI-GeneID:
112154461
NCBI-ProteinID:
XP_024141192
Ensembl:
ENSOMEG00000009461
LinkDB
All DBs
Position
LG19:13199453..13210859
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AA seq
938 aa
AA seq
DB search
MNSVRATNRRPRRVSRPRPVQPERNNAERDEEAPAAAAAEMAIEESGPGAQNSPYQLRRK
TLLPKRTTAASATASACPSKGPMEGASTSSTEAFCHRAKRARVSGKSHDLPAAPAEQYLQ
QKLPDEVILKIFSYLLEQDLCQAACVCKRFSQLANDPILWKRLYMDVFEYTRPMMHPEPG
KFYQVNPEEYEHPNPWKESFQQLYKGAHVKPGFAEHFYSSPSRYKGRDNMLYYDTIEDAL
GGVQEAHFDGLIFVHSGIYTDEWIYIESPITMIGAGKYVSLRAAEAFRVVWSVFGETRRL
ELTCVLVSTLKRSCEHDSVSLVAPGKVADKVVIENTRDSTFVFMEGSEDAYVGYMTIKFN
PDDKSAQHHNAHHCLEITVNCSPNIDHCIIRSTCTVGSAVCVSGQGACPTIKHCNISDCE
NVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMGYF
ENCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAGVW
ITSNSDPTIRANAIYNGNQGGVYIFGDGRGLIESNDIYGNALAGIQIRTNSCPIVRHNKI
HDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRKNRIHSGKQVGVYFYDNG
HGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGFIEDNEIFDNAM
AGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPILR
KNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKILNNQDAIEKA
VSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCD
CGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagggctaccaacagaagaccaaggcgagtgtcgaggccgcgcccggta
caacccgaacggaacaacgcagaaagagatgaagaggctcctgcagcagctgcagcagag
atggctattgaagagtccggtccaggtgctcagaacagtccctaccagcttcgacgcaag
accctgctacccaagagaaccacagctgcctctgccaccgcctctgcctgtcccagcaag
ggccctatggagggagcctccacctcgtcaacagaagccttttgccatcgagccaagcgg
gcacgagtgtccggtaagagccacgacctcccagctgccccagcagaacaatatctgcag
cagaagctcccagatgaggttattttgaagattttctcctacttactggagcaggaccta
tgccaggcagcttgtgtctgcaaaagattcagccagctagcaaacgaccccatcctctgg
aaacgcttatatatggatgtgtttgagtatacacgtcccatgatgcatcctgagcctggc
aagttctaccaggtcaaccctgaggagtatgaacacccaaacccgtggaaagagagcttc
cagcagctatataaaggagctcatgtgaagccaggctttgctgagcatttctacagtagc
ccgagcagatacaaaggcagagataatatgctgtattatgacaccattgaggatgctctg
ggtggggtgcaggaagcccacttcgatgggctcatctttgttcactctggcatctataca
gatgagtggatttatatagagtcccccatcaccatgattggcgcgggtaagtatgtatct
ttgagagctgctgaggcctttcgtgtagtatggtcagtatttggagaaacgaggagacta
gagctgacttgtgtgttggtctccacgctaaagcgttcttgtgagcatgattccgtttct
cttgtagctcctggtaaagtagcagataaggtggtgattgaaaacacaagagactccacg
ttcgtcttcatggagggctcagaggatgcatacgtggggtacatgaccataaagtttaat
cctgatgataaatcagcgcagcaccataacgcccatcactgtctggagatcaccgtcaac
tgcagcccaaacatcgaccactgcatcatccgctccacttgtacagtgggttcagcggtg
tgtgtgagtggacagggagcctgtccgaccattaaacactgtaacatcagtgactgtgag
aatgtaggactgtacattacagaccacgcacagggcatttatgaagacaatgaaattagc
aacaatgcactagcaggaatttgggtgaaaaaccacggaaaccctatcattagacgaaac
cacattcaccacggccgagatgttggagtgttcacgtttgatcacggcatgggttacttt
gagaactgtaatattcatcggaatcgcatagcaggctttgaggtgaaggcgtacgccaac
cccacggtggtgcggtgcgagatccaccacggccaaacgggggggatctacgtccacgag
aaggggcggggccagtttatagagaacaaaatttatgccaacaactttgcaggcgtgtgg
atcacatccaacagtgaccccacgatacgggccaatgctatttacaacggtaatcaaggc
ggcgtgtacatatttggagacgggcgaggtttgatagaaagcaatgacatctacggcaac
gccctggccggaatccagatccgaaccaacagctgccccatcgttcggcacaacaagatc
cacgacggacagcacgggggcatctatgtgcacgagaaaggtcagggagtcatcgaggag
aatgaggtgtacagcaacactctggctggagtctgggtgaccacaggcagcactcctgtc
ctccgcaagaaccgcatccacagcggcaaacaggttggggtttatttctatgacaacggc
cacggcgttttggaagacaatgacatctacaatcacatgtactctggtgtacaaataagg
acgggaagcaatccgaagatcagacgcaacaaaatctggggggggcagaatggagggatt
ctggtctacaactccggtttgggcttcatcgaggacaatgaaatctttgacaacgccatg
gcgggggtgtggatcaagacggacagcaaccccactttgaggagaaataagattcacgac
ggcagagacgggggaatctgcatttttaacggaggccgaggtcttctggaagaaaatgac
atcttcaggaacgctcaggccggcgtcctcatcagcaccaacagtcatcccatcctccgc
aagaatcgcatttttgatggtttcgctgcagggattgagatcactaaccacgccaccgca
acactggagggaaaccagatcttcaacaatcgcttcggagggctttttctggcctcagga
gtcaacgtcactatgaaagataacaagattctgaacaatcaggatgctattgagaaggcg
gtgagcagaggacagtgtctgtacaagatctccagctacaccagttaccccatgcacgac
ttctacagatgtcacacctgtaatacaacagataggaacgccatctgtgtcaactgcatc
aaaaaatgtcaccaaggacacgatgtagagtttatacggcatgatcggtttttctgtgac
tgtggagcaggaacgttgtccaacccttgcacgctcgccggagagcccacacacgacacg
gacactctgtacgactctgcgccgcctatcgagtccaacacactgcagcataactga
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