Oryzias melastigma (Indian medaka): 112154462 Help Entry 112154462         CDS       T07439                                  Symbol msh2 Name (RefSeq) DNA mismatch repair protein Msh2   KO K08735   DNA mismatch repair protein MSH2 Organism oml  Oryzias melastigma (Indian medaka) Pathway oml03430   Mismatch repair Brite KEGG Orthology (KO) [BR:oml00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     112154462 (msh2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:oml03400]     112154462 (msh2) DNA repair and recombination proteins [BR:oml03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      112154462 (msh2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27 Motif Other DBs NCBI-GeneID:  112154462 NCBI-ProteinID:  XP_024141196 Ensembl:  ENSOMEG00000009381 LinkDB All DBs Position LG19:complement(13213653..13221572) Genome browser AA seq 934 aa AA seqDB search MAVQPKQNLSMDSATEHGFLSFIFSMPEKPDTTFRIFDRNEYYTVHGKDAIFAAKEVFKT NGVIKYLGSGSRKLESVILSKLNFEAFVKDLLLVRQYRVEVYRNHSKSSKEHDWRIEYKA SPGNLTQFEDILFGGATGAEGCAGVVAVRFATAADGQRMVGVGYVDAAQRKMGVCEFPDN EIFSNLESLLVQISPKECLLAQGENSTDGNKLREVVQRGGMLVSDRKRADFSSKDIIQDL NRLLRAKKGEAMASNTLSELDKQVAMSCLAAVVRFLDLLSDESNFNSFSLAPLDLGQYMR LDNAAVRALNLFQGSPDDLSGAHSLAGLLNKCRTPQGQRLLNQWIKQPLMDKTKIEERLD LVESFVCDAELRQTCQEDLLRRFPDLHRLAKKFHRHSATLQDCYRVYQAVSQIPGLIAAL EKYSGSYQVLLQAVFTVPLSDLQTDFTKYQEMVETTLDMNQIDHHEFLVKASFDPVLSEL RDKMDDLEKSMQAVLNSAARELGLEAGKTVKLESNAMLGFYLRVTCKEEKGLRNNKKFTT LDVQKNGVRFTNSKLSSLNEEYTKNKEEYEEAQNAIVKEIINIASGYVDPLQTLSDVIAQ LDAVVSLAGASVSAPVPYVRPCILDGSCRRLELVQARHPCMETDADTAFIPNDVSFVQGE KSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSILARVGAGDSQVKG VSTFMSEMLETAAILRSASEKSLIIIDELGRGTSTYDGFGLAWAISEHIASKIRCFCLFA THFHELTALAAQQPGVHNLHVTALTTHDTLTMLYRVKAGVCDQSFGIHVAELAHFPPAVL AAAREKAEELEEFQELTGDKPEEDEPEAKRRRTDKQAGESLIQEFLQKVKSLPVGTMVEE EVKVELKRLKQELVSKNNTYISDILARCVPAKTT NT seq 2805 nt NT seq  +upstreamnt  +downstreamnt atggcggtgcagccgaagcaaaacctctccatggacagtgcgaccgagcacggcttcttg agcttcattttctcgatgccggagaagccggacaccacgttccgcatatttgaccggaac gaatactacacggttcacgggaaagacgccatttttgctgccaaggaggttttcaaaact aatggggtcatcaaatatttaggttcaggcagtcgaaaactggagagtgtgatcctgagc aagctgaattttgaggcctttgtgaaagacttgctgctggtgaggcagtacagagtggaa gtttacagaaatcacagcaaaagcagcaaagagcacgactggagaattgagtacaaggcc tcgccgggaaacctgactcagtttgaggatattctctttggaggtgcgacgggagcagag ggctgtgcgggagtcgtggccgtccggtttgcaacagcagctgatgggcagcgcatggtt ggagtcggctacgtagacgcagctcagaggaaaatgggagtttgcgagtttccagacaac gagatcttctccaacctggagtccctgctcgtccagattagccccaaagagtgtctctta gctcagggtgaaaacagcactgatgggaacaaactgcgggaggtggtgcagcgcggtggg atgctggtgtccgacagaaagagagctgacttcagcagcaaagacatcatccaggatctc aacaggctgctgagggcgaagaaaggagaagcaatggcgagcaacacactttctgagctg gacaagcaggtggccatgtcgtgcttggctgcagtggtgcgattcctcgacctgctttca gacgagtctaacttcaactcctttagcctcgccccactggacctgggtcagtacatgagg ctggacaatgctgcggtcagagctcttaacctcttccagggctcacctgatgacctcagc ggcgctcactcattggccggtttgttgaacaagtgtcgcacgccgcagggacagcgattg ctcaaccagtggatcaaacagccgctcatggacaaaaccaaaatagaggagaggttggac cttgttgagagttttgtgtgtgacgctgagctgaggcaaacttgtcaggaggacttgctg cgccgcttccctgaccttcaccgcctggccaagaagtttcaccgccactctgccacgctg caggactgctaccgcgtctaccaggctgtgagccaaatccccggcctcatcgcagctttg gagaagtactcgggaagctaccaggttctcctgcaggcggtcttcaccgtcccgctctca gacctgcagaccgacttcaccaagtaccaggagatggttgaaaccacactggacatgaat cagattgatcatcatgagttcctggtgaaggcatcgtttgatcctgtgctgagcgagctt agagataagatggatgatctggagaagagcatgcaggcggttctaaacagtgctgccaga gaactgggtctggaggcgggtaaaacggtgaagctggagtccaacgccatgctgggtttc tacctgagagtcacgtgtaaggaggagaaaggcctgcggaacaacaagaagttcaccacc ctggacgtccagaagaacggggtgcgcttcaccaacagcaagctgagctctctgaatgag gagtacaccaaaaacaaggaggagtatgaggaggcccagaacgccatcgtcaaagagatc atcaacatcgcctcgggttacgtggatcctctccagacgctgagcgacgtcatagcgcag ctggacgcggtggtgagcttggccggggcgtccgtttcggcgcccgtgccgtacgtccgt ccctgcatcttggatggaagctgccggcgcttggagctggtgcaggcccggcacccctgc atggagacggacgccgacaccgccttcatacccaacgacgtctccttcgttcagggggag aagagtttctacatcatcacaggacccaacatgggcggcaagtcgacgttcatccggcag gtgggcgtgatcgccctgatggctcagatcggctgcttcgtcccgtgtgagaaggcggag ctaagcgtgatcgacagcattctggcgcgggtgggagcgggcgacagtcaggtgaaagga gtgtccaccttcatgtcagagatgctggaaaccgccgccattttacgctcggcctcagag aagtcgctcatcatcatcgacgaactgggcaggggcacgtccacgtacgacggcttcggc ctggcctgggccatcagcgagcacatcgcatccaaaattcgctgtttctgtctcttcgca actcacttccacgagctgacggcgctggcggcgcagcagcccggcgtgcacaatctgcac gtcacggccctgacgacgcacgacacgctcaccatgctgtaccgggtcaaagcaggcgtg tgtgaccagagttttgggatccacgttgcggagttggcccacttccctccagcggtgctc gcggcggcgagggagaaggcagaggagctggaggagttccaggagctcacgggggataaa ccggaggaagatgagcccgaagccaagaggaggaggacggacaaacaagccggagaaagt ctgatccaggagttcctgcagaaggtgaagtcgcttcctgtcggcaccatggtggaggag gaggtgaaggtggagctgaagaggctgaagcaggagctggtctccaaaaacaacacctac atcagtgacatcctggctcgctgtgttcctgcgaaaaccacctga

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