KEGG   Oryzias melastigma (Indian medaka): 112154484
Entry
112154484         CDS       T07439                                 
Symbol
si:ch211-141o9.10
Name
(RefSeq) probable endonuclease 4
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    112154484 (si:ch211-141o9.10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oml03400]
    112154484 (si:ch211-141o9.10)
Enzymes [BR:oml01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     112154484 (si:ch211-141o9.10)
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     112154484 (si:ch211-141o9.10)
SSDB
Motif
Pfam: AP_endonuc_2 Ntox15
Other DBs
NCBI-GeneID: 112154484
NCBI-ProteinID: XP_024141221
Ensembl: ENSOMEG00000008304
UniProt: A0A3B3BNN4
LinkDB
Position
LG19:complement(898420..903868)
AA seq 324 aa
MGPRKRGARKRKSEDALVEEDSKNTERKAEEEEGDAGRRRKKFIGAHVGIQGGVWKAVDS
CLQMGGNSFALFLGSQRSWKRPALDPSAAEKFRDQCSSHGFDPAHILPHGSYLMNCGSPK
EDVFAKSQELLVDELSRCHMLGLKLYNFHPGSSLGTITTEQCVEKIAGAINHAHQQIPDV
VTVLENMSGQGSTVGGKFSELRSIIDRVRDQSRVGVCLDTCHAFSAGYDLAAEGGVKAML
DQFDQEVGRHYLRALHLNDSKGQLGCHLDRHEDIGKGNIGISAFRDIVNEPRLENIPLIL
ETPGRPGFEYSDQIQLLRSLCEEK
NT seq 975 nt   +upstreamnt  +downstreamnt
atgggtccgagaaaaagaggggcgcgaaagaggaaaagcgaagatgctttggtggaggaa
gacagcaaaaacaccgagaggaaggctgaagaagaggagggagacgcggggaggaggagg
aagaagttcatcggagctcacgttggaattcaaggcggggtatggaaagccgtagactcg
tgtctacagatgggaggcaacagtttcgccttgtttctgggttctcagcgctcctggaag
aggcctgctctggatccatctgctgcagaaaagttccgggatcagtgttcctcacacgga
tttgatcccgcccacatcctgccccacggctcctatctgatgaactgtggatctcctaaa
gaggatgtgtttgcgaagagccaggagctgctggtggatgagctcagccgctgccacatg
ctgggcctgaagctgtataacttccatcctggctcctcactggggactatcaccactgaa
cagtgtgtggaaaagatagctggagccattaaccacgcccaccagcaaatacctgatgtg
gttacagtgctggagaacatgagtggccagggcagcacagtgggcggtaagttctcagaa
ctcaggagcatcatcgacagagtgagagaccagagcagagtaggagtgtgtctggatacc
tgtcacgccttttcagcaggctatgatctggcagcagagggaggggttaaagccatgctg
gatcagtttgatcaggaagtagggcgtcactatctcagagcactccacctcaatgattcc
aaaggtcaactcggctgtcatcttgatcggcatgaagatataggtaaaggtaacattggg
atctctgcgttccgagacatcgtcaatgaacccagactggagaacatccctctgattctg
gagacgccgggacggcctggatttgaatattctgatcaaattcagcttctgcgatccttg
tgtgaagaaaaatga

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