KEGG   Oryzias melastigma (Indian medaka): 112154490
Entry
112154490         CDS       T07439                                 
Symbol
itga3b
Name
(RefSeq) integrin alpha-3b isoform X1
  KO
K06482  integrin alpha 3
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04510  Focal adhesion
oml04512  ECM-receptor interaction
oml04810  Regulation of actin cytoskeleton
oml04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112154490 (itga3b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112154490 (itga3b)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112154490 (itga3b)
   04810 Regulation of actin cytoskeleton
    112154490 (itga3b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oml04147]
    112154490 (itga3b)
   04515 Cell adhesion molecules [BR:oml04515]
    112154490 (itga3b)
   04090 CD molecules [BR:oml04090]
    112154490 (itga3b)
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112154490 (itga3b)
Cell adhesion molecules [BR:oml04515]
 Integrins
  Integrin alpha subunits
   112154490 (itga3b)
CD molecules [BR:oml04090]
 Proteins
  112154490 (itga3b)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3
Other DBs
NCBI-GeneID: 112154490
NCBI-ProteinID: XP_024141228
Ensembl: ENSOMEG00000005453
LinkDB
Position
LG19:3245748..3286474
AA seq 1074 aa
MSAKLWLCAFLTIYRTPTCRGFNLDERFPVIKVGKTSGSLFGFSVALHEQTEGSRRHLLL
VGAPKEKSNGLKNVNETGAVYSCPMSTTFDDCTRVDLVTQTNSFEMVEGMWLGVTVASQK
GHPAGRVLMCGHRYAKVFTGSTEEQRRMIGKCYVRGNDLTYDSSDYWQTESYEVCNPGND
MESEGQCNLGISGGIGHTDVYLGAVGSYTWQGNVHVIWRNPDPSSTWETITKDFGEIDKR
NIYMGYSVLEEQKLLQRDQYTVVTGAPRFDSKGLVVLGEMSQLKIKVMQFIPGEQVGSYF
GSSLAAADLNNDDWNDLIVGAPFYFERQNQKGGAVYIFMNENGSFQNVSTKVLKGPAYSG
FGFAVAAIGDVNQDGFQDIAVGAPFQDSGRVYIWMGSKKGISDMWSQEIKGKSVGDGNFQ
SFGYSIDGGMDMDGNSYPDMVVGSLDDRVALIRARPVIHLTKNFTVTPFIVDPSQCTNDK
ACITATVCMSFTLSNGNKYFKRNVVVDYTVEAGVGELRRRVHFQDDHSTITRSLTLSSSE
SICETLNVFVNTPVRDKLDPVIFSVNMSLQNPNSKARRSLQNLDAFPVLSQEQKLVHKAE
IHFQKECGDDNKCSSNLKLKAEFVDEKENPYPRRDGMQVLQYDRNMRIIIGLKVDVTNLK
SPGKVAEDAHQTMLNVTFPTTLRYSGVRPSTYQCHSNDQNNGVLCEIGNPVKAEDTNSLR
LLFETSDIDLNTNLIECQLLLSTVSEQSDLKPEALKIQIENTIHPNFEIKNPIVRTKFGG
TVMGESAMVNSSDVGSLVEFTATVDVEEQPLGDLGMLAVEFEWPLEVANGKWLLYLTKVV
VKGESETECDAGGHANSLNLTLSHRRSGRTKRQADNNNADEKFQSEMNEPQPVITQFTPR
KESYVLDCAERTAKCVTFSCPLLNMSRTAEVYVRSRLWNSTMLEDYSNALDVIIKGQATL
KLITKIPTIKMENQPREFRVLIEPEEGVETPYELPLWIIISAVVAGVLLLGIIIAILWKL
GFFKRALYYRIMPKHRAVKIRRAERYRLNLGFGPEEPQKKYWITNWTEMQHFYY
NT seq 3225 nt   +upstreamnt  +downstreamnt
atgtctgccaaactgtggctgtgcgcctttctgaccatttacaggacgccgacctgccgc
ggatttaacctcgacgagcgttttcctgtgatcaaagtggggaagaccagcgggagcttg
tttggattctcggtggcgctgcacgagcagacggagggctccagacggcacctgctcctg
gtgggagctcccaaagagaaatccaacggcctgaagaacgtcaacgagaccggagctgtc
tacagctgccccatgtccacaacgtttgatgactgcacccgagtggacctggtgacccaa
acaaattcatttgagatggtggaaggcatgtggcttggtgtgacagtggccagtcagaag
ggacatccagctgggcgtgtgctgatgtgtggacatcgatacgctaaggtcttcacagga
agcacagaggagcagcggcggatgatcggaaaatgttacgtgaggggcaacgacctcacc
tacgattccagtgactactggcagactgaaagctatgaggtctgcaaccctgggaatgac
atggaatctgagggccagtgcaacctgggcatatctggaggcatcggacacactgatgtc
tacctcggcgctgtgggcagctacacgtggcaaggaaacgttcatgtaatctggaggaat
cctgacccatcaagcacatgggagacgatcaccaaagactttggtgaaattgacaaacga
aacatctacatgggttattcggttcttgaagagcagaagctgctgcagcgtgaccagtat
acagtggtgacgggggcgccgaggtttgattcaaagggcttggtggttcttggggagatg
agtcaattaaagatcaaggtcatgcagttcatccctggggagcaagtgggctcgtacttt
gggagcagcctggcggccgcggacctcaacaatgacgattggaatgatctgattgtgggg
gctccgttctacttcgagcggcagaaccaaaaaggaggagcggtgtacattttcatgaac
gagaacggctccttccagaatgtttccactaaagtgcttaagggtccggcgtattcaggc
ttcggcttcgcggttgccgccatcggagatgtcaatcaggatgggttccaagacattgct
gtgggagcgccgttccaggattctgggcgggtctacatctggatgggaagtaaaaaggga
atctcggatatgtggagccaggagattaagggaaaatcagtgggcgacggtaattttcaa
agctttggctattccatcgatggagggatggacatggatggcaacagctaccctgacatg
gtggtcgggtctttggatgaccgcgtggctctgatcagagcacgtccagtaatccaccta
accaagaacttcaccgtgacaccttttattgtggatcccagtcagtgcaccaatgataaa
gcatgcattacagctactgtttgtatgtccttcacactgagcaatgggaacaaatacttc
aagaggaacgtcgtggtggactacacagtggaagccggtgtgggagaattacgaagacgc
gttcatttccaggatgaccactccacaataaccagatccttaaccttgtcgtcctccgaa
tccatttgtgaaaccctcaacgtttttgtgaatactcctgtcagggacaaactggacccc
gtgattttttccgtcaacatgtcgctgcagaatccaaactcaaaggccaggcgctccctg
cagaacctggacgccttccctgttttgagtcaggagcagaagctcgtccacaaggccgag
attcactttcagaaggagtgtggagatgacaataaatgtagcagtaacctgaagctcaag
gccgagtttgttgatgagaaagaaaatccttaccccaggagagacgggatgcaggtgctc
cagtacgacaggaatatgaggataataatcgggctgaaggtggacgtgaccaacttgaaa
tcccccggaaaagtggctgaagatgctcaccagaccatgctcaacgtcaccttccccacc
actttgagatactccggcgtcagaccttcaacgtatcaatgccactccaacgatcaaaac
aatggagtcctttgtgaaatcgggaatcctgtgaaagctgaggacacgaattccctgcgg
ctgctgtttgagacgtcagacatcgatctgaacacaaatctgatcgagtgtcagctgctt
ctgtcaactgtcagcgaacagtcggacctgaagcccgaggcgctgaaaatccagatcgag
aacaccattcatcccaatttcgaaattaaaaatccgattgtgcgaacaaaatttggtggg
acggtgatgggcgagtcagcgatggtcaacagcagtgacgtcggcagtctggtggagttc
accgccaccgtggacgtggaggaacaaccgctgggagacttggggatgcttgctgtggag
tttgagtggcccttagaggtggcgaacggcaagtggctgctgtacctgacgaaggtcgtc
gtcaagggcgaatcggaaacggaatgtgacgctggaggacacgccaacagtctcaacctc
actttgtcgcacagacgatccggacgtaccaagcggcaggctgacaacaacaacgctgat
gagaagtttcagagcgagatgaacgagccacaacctgtcatcacgcagttcacgccacga
aaggagtcctacgtgctggattgcgctgagaggacggcaaagtgtgtgaccttttcctgc
ccgctgctgaacatgtccagaacggctgaagtctacgtccgctcgcggctgtggaacagc
accatgcttgaggactattccaacgccctggacgtaatcattaaaggtcaagccacactc
aagctcatcacaaaaatacccactatcaaaatggaaaaccagcccagagagtttagggtg
ctaatagagccagaagaaggagtagaaacgccctacgagcttcccctgtggatcatcatc
tcggcggttgtggctggagttctgctgttagggatcatcatcgccattttatggaagctt
gggttcttcaagcgagctctctactaccggataatgccaaagcatcgcgcggtgaagatc
cgcagagccgagcgttatcggctcaatcttggatttggtcccgaggagccgcagaaaaag
tactggatcaccaactggacagagatgcagcatttttactactga

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